RNA–Protein interactions for RNA: ENST00000427444.1

HFM1-202, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-202ENST00000427444 CCDC61Q9Y6R9 512 aa18.11■□□□□ 0.49
HFM1-202ENST00000427444 VASPP50552 380 aaPredicted RBP18.06■□□□□ 0.48
HFM1-202ENST00000427444 NUBP1P53384 320 aa18.05■□□□□ 0.48
HFM1-202ENST00000427444 MS4A3Q96HJ5 214 aa18.05■□□□□ 0.48
HFM1-202ENST00000427444 KIF12Q96FN5 646 aa17.99■□□□□ 0.47
HFM1-202ENST00000427444 KLHL34Q8N239 644 aa17.97■□□□□ 0.47
HFM1-202ENST00000427444 FAM212AQ96EL1 285 aa17.94■□□□□ 0.46
HFM1-202ENST00000427444 MAP3K13O43283 966 aa17.92■□□□□ 0.46
HFM1-202ENST00000427444 LHX8Q68G74 356 aa17.92■□□□□ 0.46
HFM1-202ENST00000427444 DCAF8Q5TAQ9 597 aa17.87■□□□□ 0.45
HFM1-202ENST00000427444 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.44
HFM1-202ENST00000427444 ATMINO43313 823 aaPredicted RBP17.81■□□□□ 0.44
HFM1-202ENST00000427444 ASTLQ6HA08 431 aaPredicted RBP17.81■□□□□ 0.44
HFM1-202ENST00000427444 TRPC6Q9Y210 931 aa17.81■□□□□ 0.44
HFM1-202ENST00000427444 PCDHB13Q9Y5F0 798 aa17.8■□□□□ 0.44
HFM1-202ENST00000427444 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
HFM1-202ENST00000427444 PYGBP11216 843 aa17.73■□□□□ 0.43
HFM1-202ENST00000427444 BMP2KQ9NSY1 1161 aaPredicted RBP17.73■□□□□ 0.43
HFM1-202ENST00000427444 ATN1P54259 1190 aaPredicted RBP17.72■□□□□ 0.43
HFM1-202ENST00000427444 SGIP1Q9BQI5 828 aa17.72■□□□□ 0.43
HFM1-202ENST00000427444 IFNL1Q8IU54 200 aa17.7■□□□□ 0.42
HFM1-202ENST00000427444 TIE1P35590 1138 aa17.68■□□□□ 0.42
HFM1-202ENST00000427444 GSE1Q14687 1217 aa17.67■□□□□ 0.42
HFM1-202ENST00000427444 SPOCK2Q92563 424 aa17.67■□□□□ 0.42
HFM1-202ENST00000427444 METRNQ9UJH8 293 aa17.67■□□□□ 0.42
HFM1-202ENST00000427444 SLC39A7Q92504 469 aa17.66■□□□□ 0.42
HFM1-202ENST00000427444 C7P10643 843 aa17.63■□□□□ 0.41
HFM1-202ENST00000427444 TTLL13PA6NNM8 815 aa17.62■□□□□ 0.41
HFM1-202ENST00000427444 POTEB2H3BUK9 544 aa17.6■□□□□ 0.41
HFM1-202ENST00000427444 CIZ1Q9ULV3 898 aaPredicted RBP17.57■□□□□ 0.4
HFM1-202ENST00000427444 PCDHB8Q9UN66 801 aa17.57■□□□□ 0.4
HFM1-202ENST00000427444 TMEM106CQ9BVX2 250 aa17.55■□□□□ 0.4
HFM1-202ENST00000427444 TRIM35Q9UPQ4 493 aa17.52■□□□□ 0.4
HFM1-202ENST00000427444 CHRM1P11229 460 aaPredicted RBP17.46■□□□□ 0.39
HFM1-202ENST00000427444 OTUD5Q96G74 571 aa17.46■□□□□ 0.39
HFM1-202ENST00000427444 POTEFA5A3E0 1075 aa17.43■□□□□ 0.38
HFM1-202ENST00000427444 SEC24BO95487 1268 aa17.43■□□□□ 0.38
HFM1-202ENST00000427444 ZNF467Q7Z7K2 595 aaPredicted RBP17.42■□□□□ 0.38
HFM1-202ENST00000427444 POTEJP0CG39 1038 aa17.4■□□□□ 0.38
HFM1-202ENST00000427444 COLQQ9Y215 455 aaPredicted RBP17.4■□□□□ 0.38
HFM1-202ENST00000427444 IER5LQ5T953 404 aa17.37■□□□□ 0.37
HFM1-202ENST00000427444 PSEN1P49768 467 aa17.3■□□□□ 0.36
HFM1-202ENST00000427444 MAMSTRQ6ZN01 415 aa17.3■□□□□ 0.36
HFM1-202ENST00000427444 PLCG2P16885 1265 aa17.26■□□□□ 0.35
HFM1-202ENST00000427444 SCUBE2Q9NQ36 999 aa17.25■□□□□ 0.35
HFM1-202ENST00000427444 PDAP1Q13442 181 aaKnown RBP17.24■□□□□ 0.35
HFM1-202ENST00000427444 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
HFM1-202ENST00000427444 IRX5P78411 483 aaPredicted RBP17.23■□□□□ 0.35
HFM1-202ENST00000427444 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
HFM1-202ENST00000427444 OCEL1Q9H607 264 aa17.18■□□□□ 0.34
HFM1-202ENST00000427444 MKRN3Q13064 507 aaKnown RBP17.17■□□□□ 0.34
HFM1-202ENST00000427444 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
HFM1-202ENST00000427444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.07■□□□□ 0.32
HFM1-202ENST00000427444 RIOK3O14730 519 aaKnown RBP17.05■□□□□ 0.32
HFM1-202ENST00000427444 RNF25Q96BH1 459 aaPredicted RBP17.05■□□□□ 0.32
HFM1-202ENST00000427444 PDCD7Q8N8D1 485 aaKnown RBP17.04■□□□□ 0.32
HFM1-202ENST00000427444 SLAIN1Q8ND83 568 aa16.99■□□□□ 0.31
HFM1-202ENST00000427444 ECM2O94769 699 aaPredicted RBP16.95■□□□□ 0.3
HFM1-202ENST00000427444 FAM163AQ96GL9 167 aaPredicted RBP16.95■□□□□ 0.3
HFM1-202ENST00000427444 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.94■□□□□ 0.3
HFM1-202ENST00000427444 VGFO15240 615 aaPredicted RBP16.94■□□□□ 0.3
HFM1-202ENST00000427444 ZFP91Q96JP5 570 aaPredicted RBP16.94■□□□□ 0.3
HFM1-202ENST00000427444 EFCAB3Q8N7B9 438 aa16.93■□□□□ 0.3
HFM1-202ENST00000427444 L3MBTL3Q96JM7 780 aaPredicted RBP16.92■□□□□ 0.3
HFM1-202ENST00000427444 DPY19L2Q6NUT2 758 aa16.91■□□□□ 0.3
HFM1-202ENST00000427444 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.91■□□□□ 0.3
HFM1-202ENST00000427444 PKD2Q13563 968 aa16.89■□□□□ 0.29
HFM1-202ENST00000427444 ILDR1Q86SU0 546 aaPredicted RBP16.89■□□□□ 0.29
HFM1-202ENST00000427444 C3orf67Q6ZVT6 689 aa16.86■□□□□ 0.29
HFM1-202ENST00000427444 POTEMA6NI47 508 aa16.85■□□□□ 0.29
HFM1-202ENST00000427444 POTEGQ6S5H5 508 aa16.83■□□□□ 0.28
HFM1-202ENST00000427444 LCE2DQ5TA82 110 aaPredicted RBP16.82■□□□□ 0.28
HFM1-202ENST00000427444 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
HFM1-202ENST00000427444 G3V3G9 751 aa16.8■□□□□ 0.28
HFM1-202ENST00000427444 RGL2O15211 777 aa16.79■□□□□ 0.28
HFM1-202ENST00000427444 BCL11BQ9C0K0 894 aaPredicted RBP16.79■□□□□ 0.28
HFM1-202ENST00000427444 BOLA1Q9Y3E2 137 aa16.78■□□□□ 0.28
HFM1-202ENST00000427444 STK24Q9Y6E0 443 aa16.76■□□□□ 0.27
HFM1-202ENST00000427444 SOX12O15370 315 aa16.74■□□□□ 0.27
HFM1-202ENST00000427444 STK25O00506 426 aa16.73■□□□□ 0.27
HFM1-202ENST00000427444 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
HFM1-202ENST00000427444 ST18O60284 1047 aa16.67■□□□□ 0.26
HFM1-202ENST00000427444 SNPHO15079 494 aa16.66■□□□□ 0.26
HFM1-202ENST00000427444 MS4A4AQ96JQ5 239 aa16.66■□□□□ 0.26
HFM1-202ENST00000427444 TMEM121BQ9BXQ6 578 aaPredicted RBP16.62■□□□□ 0.25
HFM1-202ENST00000427444 NLRP6P59044 892 aa16.61■□□□□ 0.25
HFM1-202ENST00000427444 MICALL2Q8IY33 904 aa16.6■□□□□ 0.25
HFM1-202ENST00000427444 FBXO22Q8NEZ5 403 aa16.56■□□□□ 0.24
HFM1-202ENST00000427444 MFRPQ9BY79 579 aa16.56■□□□□ 0.24
HFM1-202ENST00000427444 PLSCR2Q9NRY7 297 aa16.54■□□□□ 0.24
HFM1-202ENST00000427444 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
HFM1-202ENST00000427444 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
HFM1-202ENST00000427444 TMEM92Q6UXU6 159 aa16.47■□□□□ 0.23
HFM1-202ENST00000427444 HOXB3P14651 431 aaPredicted RBP16.42■□□□□ 0.22
HFM1-202ENST00000427444 CDAN1Q8IWY9 1227 aa16.42■□□□□ 0.22
HFM1-202ENST00000427444 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
HFM1-202ENST00000427444 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
HFM1-202ENST00000427444 EMP3P54852 163 aa16.38■□□□□ 0.21
HFM1-202ENST00000427444 ZNF710Q8N1W2 664 aa16.37■□□□□ 0.21
HFM1-202ENST00000427444 DOK7Q18PE1 504 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms