RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 RASEFQ8IZ41 740 aa16.28■□□□□ 0.2
LINC00458-202ENST00000427299 KIF12Q96FN5 646 aa16.22■□□□□ 0.19
LINC00458-202ENST00000427299 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
LINC00458-202ENST00000427299 ASTLQ6HA08 431 aaPredicted RBP16.19■□□□□ 0.18
LINC00458-202ENST00000427299 PELP1Q8IZL8 1130 aaKnown RBP16.19■□□□□ 0.18
LINC00458-202ENST00000427299 NUBP1P53384 320 aa16.16■□□□□ 0.18
LINC00458-202ENST00000427299 ATMINO43313 823 aaPredicted RBP16.14■□□□□ 0.17
LINC00458-202ENST00000427299 POTEB2H3BUK9 544 aa16.13■□□□□ 0.17
LINC00458-202ENST00000427299 FBXO3Q9UK99 471 aa16.13■□□□□ 0.17
LINC00458-202ENST00000427299 MAP3K13O43283 966 aa16.11■□□□□ 0.17
LINC00458-202ENST00000427299 OTUD5Q96G74 571 aa16.09■□□□□ 0.17
LINC00458-202ENST00000427299 TRPC6Q9Y210 931 aa16.06■□□□□ 0.16
LINC00458-202ENST00000427299 SLC39A7Q92504 469 aa16.03■□□□□ 0.16
LINC00458-202ENST00000427299 METRNQ9UJH8 293 aa16.03■□□□□ 0.16
LINC00458-202ENST00000427299 ATN1P54259 1190 aaPredicted RBP16.02■□□□□ 0.16
LINC00458-202ENST00000427299 BMP2KQ9NSY1 1161 aaPredicted RBP16.02■□□□□ 0.16
LINC00458-202ENST00000427299 C7P10643 843 aa16.01■□□□□ 0.15
LINC00458-202ENST00000427299 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
LINC00458-202ENST00000427299 SGIP1Q9BQI5 828 aa15.99■□□□□ 0.15
LINC00458-202ENST00000427299 TIE1P35590 1138 aa15.98■□□□□ 0.15
LINC00458-202ENST00000427299 VASPP50552 380 aaPredicted RBP15.96■□□□□ 0.15
LINC00458-202ENST00000427299 PCDHB13Q9Y5F0 798 aa15.95■□□□□ 0.14
LINC00458-202ENST00000427299 TTLL13PA6NNM8 815 aa15.91■□□□□ 0.14
LINC00458-202ENST00000427299 IFNL1Q8IU54 200 aa15.89■□□□□ 0.13
LINC00458-202ENST00000427299 POTEJP0CG39 1038 aa15.88■□□□□ 0.13
LINC00458-202ENST00000427299 DCAF8Q5TAQ9 597 aa15.85■□□□□ 0.13
LINC00458-202ENST00000427299 POTEFA5A3E0 1075 aa15.84■□□□□ 0.13
LINC00458-202ENST00000427299 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
LINC00458-202ENST00000427299 PLSCR2Q9NRY7 297 aa15.8■□□□□ 0.12
LINC00458-202ENST00000427299 PYGBP11216 843 aa15.79■□□□□ 0.12
LINC00458-202ENST00000427299 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
LINC00458-202ENST00000427299 IER5LQ5T953 404 aa15.75■□□□□ 0.11
LINC00458-202ENST00000427299 MAMSTRQ6ZN01 415 aa15.75■□□□□ 0.11
LINC00458-202ENST00000427299 TMEM106CQ9BVX2 250 aa15.75■□□□□ 0.11
LINC00458-202ENST00000427299 COLQQ9Y215 455 aaPredicted RBP15.75■□□□□ 0.11
LINC00458-202ENST00000427299 POTEMA6NI47 508 aa15.72■□□□□ 0.11
LINC00458-202ENST00000427299 GSE1Q14687 1217 aa15.71■□□□□ 0.11
LINC00458-202ENST00000427299 SEC24BO95487 1268 aa15.69■□□□□ 0.1
LINC00458-202ENST00000427299 IFNLR1Q8IU57 520 aaPredicted RBP15.69■□□□□ 0.1
LINC00458-202ENST00000427299 POTEGQ6S5H5 508 aa15.68■□□□□ 0.1
LINC00458-202ENST00000427299 PCDHB8Q9UN66 801 aa15.67■□□□□ 0.1
LINC00458-202ENST00000427299 SCUBE2Q9NQ36 999 aa15.66■□□□□ 0.1
LINC00458-202ENST00000427299 CHRM1P11229 460 aaPredicted RBP15.62■□□□□ 0.09
LINC00458-202ENST00000427299 SPOCK2Q92563 424 aa15.61■□□□□ 0.09
LINC00458-202ENST00000427299 ZNF467Q7Z7K2 595 aaPredicted RBP15.58■□□□□ 0.08
LINC00458-202ENST00000427299 IRX5P78411 483 aaPredicted RBP15.57■□□□□ 0.08
LINC00458-202ENST00000427299 LCE2DQ5TA82 110 aaPredicted RBP15.57■□□□□ 0.08
LINC00458-202ENST00000427299 PLCG2P16885 1265 aa15.54■□□□□ 0.08
LINC00458-202ENST00000427299 FAM163AQ96GL9 167 aaPredicted RBP15.53■□□□□ 0.08
LINC00458-202ENST00000427299 OCEL1Q9H607 264 aa15.48■□□□□ 0.07
LINC00458-202ENST00000427299 CIZ1Q9ULV3 898 aaPredicted RBP15.48■□□□□ 0.07
LINC00458-202ENST00000427299 PSEN1P49768 467 aa15.44■□□□□ 0.06
LINC00458-202ENST00000427299 PCDH10Q9P2E7 1040 aa15.42■□□□□ 0.06
LINC00458-202ENST00000427299 PDAP1Q13442 181 aaKnown RBP15.39■□□□□ 0.05
LINC00458-202ENST00000427299 PDCD7Q8N8D1 485 aaKnown RBP15.38■□□□□ 0.05
LINC00458-202ENST00000427299 SLAIN1Q8ND83 568 aa15.36■□□□□ 0.05
LINC00458-202ENST00000427299 GOLGA2Q08379 1002 aa15.35■□□□□ 0.05
LINC00458-202ENST00000427299 MKRN3Q13064 507 aaKnown RBP15.35■□□□□ 0.05
LINC00458-202ENST00000427299 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
LINC00458-202ENST00000427299 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
LINC00458-202ENST00000427299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.28■□□□□ 0.04
LINC00458-202ENST00000427299 CABP2Q9NPB3 220 aa15.24■□□□□ 0.03
LINC00458-202ENST00000427299 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.24■□□□□ 0.03
LINC00458-202ENST00000427299 L3MBTL3Q96JM7 780 aaPredicted RBP15.21■□□□□ 0.03
LINC00458-202ENST00000427299 ST18O60284 1047 aa15.18■□□□□ 0.02
LINC00458-202ENST00000427299 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
LINC00458-202ENST00000427299 DPY19L2Q6NUT2 758 aa15.15■□□□□ 0.02
LINC00458-202ENST00000427299 CDAN1Q8IWY9 1227 aa15.15■□□□□ 0.02
LINC00458-202ENST00000427299 RNF25Q96BH1 459 aaPredicted RBP15.15■□□□□ 0.02
LINC00458-202ENST00000427299 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
LINC00458-202ENST00000427299 SNPHO15079 494 aa15.09■□□□□ 0.01
LINC00458-202ENST00000427299 EFCAB3Q8N7B9 438 aa15.08■□□□□ 0
LINC00458-202ENST00000427299 BOLA1Q9Y3E2 137 aa15.06■□□□□ 0
LINC00458-202ENST00000427299 TMEM121BQ9BXQ6 578 aaPredicted RBP15.05■□□□□ -0
LINC00458-202ENST00000427299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
LINC00458-202ENST00000427299 VGFO15240 615 aaPredicted RBP15.03■□□□□ -0
LINC00458-202ENST00000427299 ZFP91Q96JP5 570 aaPredicted RBP15.03■□□□□ -0
LINC00458-202ENST00000427299 G3V3G9 751 aa14.98□□□□□ -0.01
LINC00458-202ENST00000427299 SOX12O15370 315 aa14.94□□□□□ -0.02
LINC00458-202ENST00000427299 MARVELD3Q96A59 401 aa14.93□□□□□ -0.02
LINC00458-202ENST00000427299 MS4A4AQ96JQ5 239 aa14.91□□□□□ -0.02
LINC00458-202ENST00000427299 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
LINC00458-202ENST00000427299 MICALL2Q8IY33 904 aa14.87□□□□□ -0.03
LINC00458-202ENST00000427299 HOXB3P14651 431 aaPredicted RBP14.86□□□□□ -0.03
LINC00458-202ENST00000427299 BCL11BQ9C0K0 894 aaPredicted RBP14.86□□□□□ -0.03
LINC00458-202ENST00000427299 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
LINC00458-202ENST00000427299 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
LINC00458-202ENST00000427299 PKD2Q13563 968 aa14.85□□□□□ -0.03
LINC00458-202ENST00000427299 EMP3P54852 163 aa14.82□□□□□ -0.04
LINC00458-202ENST00000427299 TMEM92Q6UXU6 159 aa14.8□□□□□ -0.04
LINC00458-202ENST00000427299 SPNS2Q8IVW8 549 aa14.79□□□□□ -0.04
LINC00458-202ENST00000427299 FBXO22Q8NEZ5 403 aa14.79□□□□□ -0.04
LINC00458-202ENST00000427299 STK24Q9Y6E0 443 aa14.79□□□□□ -0.04
LINC00458-202ENST00000427299 RGL2O15211 777 aa14.77□□□□□ -0.05
LINC00458-202ENST00000427299 NLRP6P59044 892 aa14.77□□□□□ -0.05
LINC00458-202ENST00000427299 STK25O00506 426 aa14.76□□□□□ -0.05
LINC00458-202ENST00000427299 MMRN1Q13201 1228 aa14.76□□□□□ -0.05
LINC00458-202ENST00000427299 POTEB3A0JP26 581 aa14.74□□□□□ -0.05
LINC00458-202ENST00000427299 DOK7Q18PE1 504 aa14.74□□□□□ -0.05
LINC00458-202ENST00000427299 POTEBQ6S5H4 581 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms