RNA–Protein interactions for RNA: ENST00000426471.6

LINC00993-202, long intergenic non-protein coding RNA 993, humanhuman

TSL 2

Gene LINC00993, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-202ENST00000426471 CCDC61Q9Y6R9 512 aa14.83□□□□□ -0.04
LINC00993-202ENST00000426471 MS4A3Q96HJ5 214 aa14.81□□□□□ -0.04
LINC00993-202ENST00000426471 VASPP50552 380 aaPredicted RBP14.8□□□□□ -0.04
LINC00993-202ENST00000426471 KLHL34Q8N239 644 aa14.8□□□□□ -0.04
LINC00993-202ENST00000426471 NUBP1P53384 320 aa14.77□□□□□ -0.05
LINC00993-202ENST00000426471 FAM212AQ96EL1 285 aa14.77□□□□□ -0.05
LINC00993-202ENST00000426471 LHX8Q68G74 356 aa14.74□□□□□ -0.05
LINC00993-202ENST00000426471 KIF12Q96FN5 646 aa14.74□□□□□ -0.05
LINC00993-202ENST00000426471 MAP3K13O43283 966 aa14.69□□□□□ -0.06
LINC00993-202ENST00000426471 DCAF8Q5TAQ9 597 aa14.69□□□□□ -0.06
LINC00993-202ENST00000426471 PCDHB13Q9Y5F0 798 aa14.63□□□□□ -0.07
LINC00993-202ENST00000426471 ATMINO43313 823 aaPredicted RBP14.6□□□□□ -0.07
LINC00993-202ENST00000426471 ASTLQ6HA08 431 aaPredicted RBP14.6□□□□□ -0.07
LINC00993-202ENST00000426471 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
LINC00993-202ENST00000426471 SGIP1Q9BQI5 828 aa14.57□□□□□ -0.08
LINC00993-202ENST00000426471 SLC39A7Q92504 469 aa14.55□□□□□ -0.08
LINC00993-202ENST00000426471 TRPC6Q9Y210 931 aa14.55□□□□□ -0.08
LINC00993-202ENST00000426471 PYGBP11216 843 aa14.54□□□□□ -0.08
LINC00993-202ENST00000426471 GSE1Q14687 1217 aa14.54□□□□□ -0.08
LINC00993-202ENST00000426471 BMP2KQ9NSY1 1161 aaPredicted RBP14.54□□□□□ -0.08
LINC00993-202ENST00000426471 TIE1P35590 1138 aa14.53□□□□□ -0.08
LINC00993-202ENST00000426471 ATN1P54259 1190 aaPredicted RBP14.53□□□□□ -0.08
LINC00993-202ENST00000426471 METRNQ9UJH8 293 aa14.53□□□□□ -0.08
LINC00993-202ENST00000426471 C7P10643 843 aa14.51□□□□□ -0.09
LINC00993-202ENST00000426471 SPOCK2Q92563 424 aa14.51□□□□□ -0.09
LINC00993-202ENST00000426471 IFNLR1Q8IU57 520 aaPredicted RBP14.5□□□□□ -0.09
LINC00993-202ENST00000426471 IFNL1Q8IU54 200 aa14.49□□□□□ -0.09
LINC00993-202ENST00000426471 TTLL13PA6NNM8 815 aa14.46□□□□□ -0.09
LINC00993-202ENST00000426471 CIZ1Q9ULV3 898 aaPredicted RBP14.45□□□□□ -0.1
LINC00993-202ENST00000426471 TMEM106CQ9BVX2 250 aa14.42□□□□□ -0.1
LINC00993-202ENST00000426471 PCDHB8Q9UN66 801 aa14.39□□□□□ -0.11
LINC00993-202ENST00000426471 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
LINC00993-202ENST00000426471 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
LINC00993-202ENST00000426471 SEC24BO95487 1268 aa14.38□□□□□ -0.11
LINC00993-202ENST00000426471 ZNF467Q7Z7K2 595 aaPredicted RBP14.34□□□□□ -0.11
LINC00993-202ENST00000426471 OTUD5Q96G74 571 aa14.31□□□□□ -0.12
LINC00993-202ENST00000426471 CHRM1P11229 460 aaPredicted RBP14.3□□□□□ -0.12
LINC00993-202ENST00000426471 IER5LQ5T953 404 aa14.29□□□□□ -0.12
LINC00993-202ENST00000426471 MAMSTRQ6ZN01 415 aa14.29□□□□□ -0.12
LINC00993-202ENST00000426471 SCUBE2Q9NQ36 999 aa14.25□□□□□ -0.13
LINC00993-202ENST00000426471 PLCG2P16885 1265 aa14.24□□□□□ -0.13
LINC00993-202ENST00000426471 COLQQ9Y215 455 aaPredicted RBP14.24□□□□□ -0.13
LINC00993-202ENST00000426471 POTEFA5A3E0 1075 aa14.23□□□□□ -0.13
LINC00993-202ENST00000426471 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
LINC00993-202ENST00000426471 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
LINC00993-202ENST00000426471 PSEN1P49768 467 aa14.2□□□□□ -0.14
LINC00993-202ENST00000426471 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
LINC00993-202ENST00000426471 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
LINC00993-202ENST00000426471 MKRN3Q13064 507 aaKnown RBP14.15□□□□□ -0.14
LINC00993-202ENST00000426471 IRX5P78411 483 aaPredicted RBP14.12□□□□□ -0.15
LINC00993-202ENST00000426471 OCEL1Q9H607 264 aa14.12□□□□□ -0.15
LINC00993-202ENST00000426471 CABP2Q9NPB3 220 aa14.04□□□□□ -0.16
LINC00993-202ENST00000426471 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.04□□□□□ -0.16
LINC00993-202ENST00000426471 RIOK3O14730 519 aaKnown RBP13.99□□□□□ -0.17
LINC00993-202ENST00000426471 SLAIN1Q8ND83 568 aa13.98□□□□□ -0.17
LINC00993-202ENST00000426471 FAM163AQ96GL9 167 aaPredicted RBP13.96□□□□□ -0.17
LINC00993-202ENST00000426471 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
LINC00993-202ENST00000426471 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
LINC00993-202ENST00000426471 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.94□□□□□ -0.18
LINC00993-202ENST00000426471 VGFO15240 615 aaPredicted RBP13.92□□□□□ -0.18
LINC00993-202ENST00000426471 G3V3G9 751 aa13.91□□□□□ -0.18
LINC00993-202ENST00000426471 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
LINC00993-202ENST00000426471 C3orf67Q6ZVT6 689 aa13.91□□□□□ -0.18
LINC00993-202ENST00000426471 RNF25Q96BH1 459 aaPredicted RBP13.91□□□□□ -0.18
LINC00993-202ENST00000426471 TAOK2Q9UL54 1235 aa13.9□□□□□ -0.18
LINC00993-202ENST00000426471 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.88□□□□□ -0.19
LINC00993-202ENST00000426471 EFCAB3Q8N7B9 438 aa13.88□□□□□ -0.19
LINC00993-202ENST00000426471 ZFP91Q96JP5 570 aaPredicted RBP13.88□□□□□ -0.19
LINC00993-202ENST00000426471 POTEMA6NI47 508 aa13.87□□□□□ -0.19
LINC00993-202ENST00000426471 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
LINC00993-202ENST00000426471 DPY19L2Q6NUT2 758 aa13.83□□□□□ -0.2
LINC00993-202ENST00000426471 ILDR1Q86SU0 546 aaPredicted RBP13.8□□□□□ -0.2
LINC00993-202ENST00000426471 BOLA1Q9Y3E2 137 aa13.79□□□□□ -0.2
LINC00993-202ENST00000426471 PKD2Q13563 968 aa13.77□□□□□ -0.21
LINC00993-202ENST00000426471 STK24Q9Y6E0 443 aa13.77□□□□□ -0.21
LINC00993-202ENST00000426471 SNPHO15079 494 aa13.76□□□□□ -0.21
LINC00993-202ENST00000426471 SOX12O15370 315 aa13.76□□□□□ -0.21
LINC00993-202ENST00000426471 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
LINC00993-202ENST00000426471 STK25O00506 426 aa13.74□□□□□ -0.21
LINC00993-202ENST00000426471 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
LINC00993-202ENST00000426471 RGL2O15211 777 aa13.72□□□□□ -0.21
LINC00993-202ENST00000426471 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
LINC00993-202ENST00000426471 ST18O60284 1047 aa13.69□□□□□ -0.22
LINC00993-202ENST00000426471 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
LINC00993-202ENST00000426471 NLRP6P59044 892 aa13.66□□□□□ -0.22
LINC00993-202ENST00000426471 PCDH10Q9P2E7 1040 aa13.62□□□□□ -0.23
LINC00993-202ENST00000426471 MICALL2Q8IY33 904 aa13.61□□□□□ -0.23
LINC00993-202ENST00000426471 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
LINC00993-202ENST00000426471 TMEM121BQ9BXQ6 578 aaPredicted RBP13.6□□□□□ -0.23
LINC00993-202ENST00000426471 MARVELD3Q96A59 401 aa13.54□□□□□ -0.24
LINC00993-202ENST00000426471 MFRPQ9BY79 579 aa13.54□□□□□ -0.24
LINC00993-202ENST00000426471 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
LINC00993-202ENST00000426471 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.25
LINC00993-202ENST00000426471 CDAN1Q8IWY9 1227 aa13.51□□□□□ -0.25
LINC00993-202ENST00000426471 EMP3P54852 163 aa13.49□□□□□ -0.25
LINC00993-202ENST00000426471 DOK7Q18PE1 504 aa13.48□□□□□ -0.25
LINC00993-202ENST00000426471 CHGAP10645 457 aaKnown RBP13.46□□□□□ -0.25
LINC00993-202ENST00000426471 RIMBP2O15034 1052 aa13.45□□□□□ -0.26
LINC00993-202ENST00000426471 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
LINC00993-202ENST00000426471 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms