RNA–Protein interactions for RNA: ENST00000426217.1

MTND4P28-201, Transcript of MT-ND4 pseudogene 28, humanhuman

BASIC

Gene MTND4P28, Length 387 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTND4P28-201ENST00000426217 POTEJP0CG39 1038 aa14.13□□□□□ -0.15
MTND4P28-201ENST00000426217 METRNQ9UJH8 293 aa14.12□□□□□ -0.15
MTND4P28-201ENST00000426217 POTEMA6NI47 508 aa14.08□□□□□ -0.16
MTND4P28-201ENST00000426217 SLC39A7Q92504 469 aa14.06□□□□□ -0.16
MTND4P28-201ENST00000426217 TSPYL2Q9H2G4 693 aaPredicted RBP14.06□□□□□ -0.16
MTND4P28-201ENST00000426217 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
MTND4P28-201ENST00000426217 C7P10643 843 aa14.05□□□□□ -0.16
MTND4P28-201ENST00000426217 POTEGQ6S5H5 508 aa14.03□□□□□ -0.16
MTND4P28-201ENST00000426217 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
MTND4P28-201ENST00000426217 KIF12Q96FN5 646 aa13.99□□□□□ -0.17
MTND4P28-201ENST00000426217 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
MTND4P28-201ENST00000426217 POTEFA5A3E0 1075 aa13.93□□□□□ -0.18
MTND4P28-201ENST00000426217 LCE2DQ5TA82 110 aaPredicted RBP13.93□□□□□ -0.18
MTND4P28-201ENST00000426217 BMP2KQ9NSY1 1161 aaPredicted RBP13.93□□□□□ -0.18
MTND4P28-201ENST00000426217 MAMSTRQ6ZN01 415 aa13.9□□□□□ -0.18
MTND4P28-201ENST00000426217 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
MTND4P28-201ENST00000426217 MAP3K13O43283 966 aa13.88□□□□□ -0.19
MTND4P28-201ENST00000426217 TIE1P35590 1138 aa13.82□□□□□ -0.2
MTND4P28-201ENST00000426217 MIER1Q8N108 512 aa13.82□□□□□ -0.2
MTND4P28-201ENST00000426217 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
MTND4P28-201ENST00000426217 PCDH10Q9P2E7 1040 aa13.81□□□□□ -0.2
MTND4P28-201ENST00000426217 FAM163AQ96GL9 167 aaPredicted RBP13.78□□□□□ -0.2
MTND4P28-201ENST00000426217 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
MTND4P28-201ENST00000426217 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
MTND4P28-201ENST00000426217 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
MTND4P28-201ENST00000426217 NUBP1P53384 320 aa13.67□□□□□ -0.22
MTND4P28-201ENST00000426217 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
MTND4P28-201ENST00000426217 SEC24BO95487 1268 aa13.66□□□□□ -0.22
MTND4P28-201ENST00000426217 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
MTND4P28-201ENST00000426217 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
MTND4P28-201ENST00000426217 PCDHB13Q9Y5F0 798 aa13.65□□□□□ -0.22
MTND4P28-201ENST00000426217 IER5LQ5T953 404 aa13.63□□□□□ -0.23
MTND4P28-201ENST00000426217 IFNL1Q8IU54 200 aa13.62□□□□□ -0.23
MTND4P28-201ENST00000426217 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
MTND4P28-201ENST00000426217 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
MTND4P28-201ENST00000426217 CDAN1Q8IWY9 1227 aa13.49□□□□□ -0.25
MTND4P28-201ENST00000426217 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
MTND4P28-201ENST00000426217 FAM212AQ96EL1 285 aa13.49□□□□□ -0.25
MTND4P28-201ENST00000426217 IRX5P78411 483 aaPredicted RBP13.48□□□□□ -0.25
MTND4P28-201ENST00000426217 ST18O60284 1047 aa13.47□□□□□ -0.25
MTND4P28-201ENST00000426217 PLCG2P16885 1265 aa13.44□□□□□ -0.26
MTND4P28-201ENST00000426217 FKBP8Q14318 412 aa13.38□□□□□ -0.27
MTND4P28-201ENST00000426217 PYGBP11216 843 aa13.37□□□□□ -0.27
MTND4P28-201ENST00000426217 OCEL1Q9H607 264 aa13.36□□□□□ -0.27
MTND4P28-201ENST00000426217 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
MTND4P28-201ENST00000426217 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
MTND4P28-201ENST00000426217 TMEM121BQ9BXQ6 578 aaPredicted RBP13.25□□□□□ -0.29
MTND4P28-201ENST00000426217 PDCD7Q8N8D1 485 aaKnown RBP13.24□□□□□ -0.29
MTND4P28-201ENST00000426217 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.23□□□□□ -0.29
MTND4P28-201ENST00000426217 MARVELD3Q96A59 401 aa13.21□□□□□ -0.29
MTND4P28-201ENST00000426217 SPNS2Q8IVW8 549 aa13.2□□□□□ -0.3
MTND4P28-201ENST00000426217 SNPHO15079 494 aa13.19□□□□□ -0.3
MTND4P28-201ENST00000426217 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
MTND4P28-201ENST00000426217 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
MTND4P28-201ENST00000426217 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
MTND4P28-201ENST00000426217 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
MTND4P28-201ENST00000426217 GSE1Q14687 1217 aa13.1□□□□□ -0.31
MTND4P28-201ENST00000426217 C3orf67Q6ZVT6 689 aa13.09□□□□□ -0.31
MTND4P28-201ENST00000426217 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
MTND4P28-201ENST00000426217 MKRN3Q13064 507 aaKnown RBP13.08□□□□□ -0.32
MTND4P28-201ENST00000426217 POTEB3A0JP26 581 aa13.07□□□□□ -0.32
MTND4P28-201ENST00000426217 POTEBQ6S5H4 581 aa13.07□□□□□ -0.32
MTND4P28-201ENST00000426217 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
MTND4P28-201ENST00000426217 PSEN1P49768 467 aa13.06□□□□□ -0.32
MTND4P28-201ENST00000426217 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
MTND4P28-201ENST00000426217 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
MTND4P28-201ENST00000426217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.06□□□□□ -0.32
MTND4P28-201ENST00000426217 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
MTND4P28-201ENST00000426217 EMP3P54852 163 aa13.04□□□□□ -0.32
MTND4P28-201ENST00000426217 KRTAP3-3Q9BYR6 98 aa13.02□□□□□ -0.33
MTND4P28-201ENST00000426217 KRTAP3-2Q9BYR7 98 aa13.02□□□□□ -0.33
MTND4P28-201ENST00000426217 DPY19L2Q6NUT2 758 aa13.01□□□□□ -0.33
MTND4P28-201ENST00000426217 HS3ST6Q96QI5 342 aa12.99□□□□□ -0.33
MTND4P28-201ENST00000426217 FAM205CA6NFA0 338 aa12.95□□□□□ -0.34
MTND4P28-201ENST00000426217 PDAP1Q13442 181 aaKnown RBP12.95□□□□□ -0.34
MTND4P28-201ENST00000426217 HOXB3P14651 431 aaPredicted RBP12.92□□□□□ -0.34
MTND4P28-201ENST00000426217 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
MTND4P28-201ENST00000426217 BOLA1Q9Y3E2 137 aa12.88□□□□□ -0.35
MTND4P28-201ENST00000426217 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
MTND4P28-201ENST00000426217 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
MTND4P28-201ENST00000426217 CIZ1Q9ULV3 898 aaPredicted RBP12.81□□□□□ -0.36
MTND4P28-201ENST00000426217 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
MTND4P28-201ENST00000426217 G3V3G9 751 aa12.77□□□□□ -0.37
MTND4P28-201ENST00000426217 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
MTND4P28-201ENST00000426217 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
MTND4P28-201ENST00000426217 DOK7Q18PE1 504 aa12.72□□□□□ -0.37
MTND4P28-201ENST00000426217 ERBB3P21860 1342 aa12.7□□□□□ -0.38
MTND4P28-201ENST00000426217 TMEM92Q6UXU6 159 aa12.7□□□□□ -0.38
MTND4P28-201ENST00000426217 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.38
MTND4P28-201ENST00000426217 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
MTND4P28-201ENST00000426217 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
MTND4P28-201ENST00000426217 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
MTND4P28-201ENST00000426217 RNF166Q96A37 237 aaPredicted RBP12.6□□□□□ -0.39
MTND4P28-201ENST00000426217 GPR153Q6NV75 609 aa12.59□□□□□ -0.39
MTND4P28-201ENST00000426217 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
MTND4P28-201ENST00000426217 ZSWIM6Q9HCJ5 1215 aa12.58□□□□□ -0.4
MTND4P28-201ENST00000426217 RNF25Q96BH1 459 aaPredicted RBP12.57□□□□□ -0.4
MTND4P28-201ENST00000426217 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
MTND4P28-201ENST00000426217 MYT1LQ9UL68 1186 aa12.54□□□□□ -0.4
MTND4P28-201ENST00000426217 SOX12O15370 315 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms