RNA–Protein interactions for RNA: ENST00000425868.5

BBX-208, Transcript of BBX, HMG-box containing, humanhuman

TSL 4

Gene BBX, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-208ENST00000425868 SPRYD3Q8NCJ5 442 aa12.7□□□□□ -0.38
BBX-208ENST00000425868 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
BBX-208ENST00000425868 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
BBX-208ENST00000425868 BCANQ96GW7 911 aa12.67□□□□□ -0.38
BBX-208ENST00000425868 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
BBX-208ENST00000425868 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
BBX-208ENST00000425868 TAOK2Q9UL54 1235 aa12.62□□□□□ -0.39
BBX-208ENST00000425868 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
BBX-208ENST00000425868 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
BBX-208ENST00000425868 KDM2AQ9Y2K7 1162 aa12.59□□□□□ -0.39
BBX-208ENST00000425868 CHRM1P11229 460 aaPredicted RBP12.58□□□□□ -0.4
BBX-208ENST00000425868 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
BBX-208ENST00000425868 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
BBX-208ENST00000425868 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
BBX-208ENST00000425868 PYGBP11216 843 aa12.5□□□□□ -0.41
BBX-208ENST00000425868 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
BBX-208ENST00000425868 STK25O00506 426 aa12.49□□□□□ -0.41
BBX-208ENST00000425868 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
BBX-208ENST00000425868 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
BBX-208ENST00000425868 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
BBX-208ENST00000425868 TSPYL2Q9H2G4 693 aaPredicted RBP12.43□□□□□ -0.42
BBX-208ENST00000425868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.41□□□□□ -0.42
BBX-208ENST00000425868 ZFP91Q96JP5 570 aaPredicted RBP12.41□□□□□ -0.42
BBX-208ENST00000425868 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
BBX-208ENST00000425868 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
BBX-208ENST00000425868 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
BBX-208ENST00000425868 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
BBX-208ENST00000425868 FXR2P51116 673 aaKnown RBP eCLIP12.34□□□□□ -0.43
BBX-208ENST00000425868 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
BBX-208ENST00000425868 ZNF467Q7Z7K2 595 aaPredicted RBP12.33□□□□□ -0.44
BBX-208ENST00000425868 RYDENQ9NUL5 291 aaKnown RBP12.31□□□□□ -0.44
BBX-208ENST00000425868 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
BBX-208ENST00000425868 NBR1Q14596 966 aa12.27□□□□□ -0.45
BBX-208ENST00000425868 TPRNQ4KMQ1 711 aa12.27□□□□□ -0.45
BBX-208ENST00000425868 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
BBX-208ENST00000425868 PCDHB8Q9UN66 801 aa12.26□□□□□ -0.45
BBX-208ENST00000425868 PCDHB13Q9Y5F0 798 aa12.26□□□□□ -0.45
BBX-208ENST00000425868 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
BBX-208ENST00000425868 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
BBX-208ENST00000425868 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
BBX-208ENST00000425868 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
BBX-208ENST00000425868 PSEN1P49768 467 aa12.19□□□□□ -0.46
BBX-208ENST00000425868 MAP3K13O43283 966 aa12.14□□□□□ -0.47
BBX-208ENST00000425868 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
BBX-208ENST00000425868 KIF12Q96FN5 646 aa12.14□□□□□ -0.47
BBX-208ENST00000425868 MFRPQ9BY79 579 aa12.08□□□□□ -0.48
BBX-208ENST00000425868 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
BBX-208ENST00000425868 CD44P16070 742 aaKnown RBP12.06□□□□□ -0.48
BBX-208ENST00000425868 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
BBX-208ENST00000425868 CABP2Q9NPB3 220 aa12.04□□□□□ -0.48
BBX-208ENST00000425868 SOX12O15370 315 aa12.02□□□□□ -0.49
BBX-208ENST00000425868 POTEHQ6S545 545 aa12.02□□□□□ -0.49
BBX-208ENST00000425868 CADPS2Q86UW7 1296 aa12.02□□□□□ -0.49
BBX-208ENST00000425868 NLRP6P59044 892 aa12.01□□□□□ -0.49
BBX-208ENST00000425868 PHF12Q96QT6 1004 aa12.01□□□□□ -0.49
BBX-208ENST00000425868 WDR70Q9NW82 654 aa12.01□□□□□ -0.49
BBX-208ENST00000425868 FBXO22Q8NEZ5 403 aa11.98□□□□□ -0.49
BBX-208ENST00000425868 PPP1R37O75864 691 aa11.97□□□□□ -0.49
BBX-208ENST00000425868 P3H3Q8IVL6 736 aa11.97□□□□□ -0.49
BBX-208ENST00000425868 PHF8Q9UPP1 1060 aa11.97□□□□□ -0.49
BBX-208ENST00000425868 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
BBX-208ENST00000425868 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
BBX-208ENST00000425868 C19orf67A6NJJ6 358 aa11.89□□□□□ -0.51
BBX-208ENST00000425868 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
BBX-208ENST00000425868 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
BBX-208ENST00000425868 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
BBX-208ENST00000425868 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
BBX-208ENST00000425868 MKRN3Q13064 507 aaKnown RBP11.83□□□□□ -0.52
BBX-208ENST00000425868 E2F4Q16254 413 aa11.8□□□□□ -0.52
BBX-208ENST00000425868 TIE1P35590 1138 aa11.79□□□□□ -0.52
BBX-208ENST00000425868 PDE4AP27815 886 aa11.78□□□□□ -0.52
BBX-208ENST00000425868 ARHGEF1Q92888 912 aaKnown RBP11.78□□□□□ -0.52
BBX-208ENST00000425868 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.53
BBX-208ENST00000425868 NCKAP5LQ9HCH0 1330 aa11.77□□□□□ -0.53
BBX-208ENST00000425868 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
BBX-208ENST00000425868 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
BBX-208ENST00000425868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
BBX-208ENST00000425868 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
BBX-208ENST00000425868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.72□□□□□ -0.532e-8■□□□□ 10.9
BBX-208ENST00000425868 CRISPLD2Q9H0B8 497 aa11.71□□□□□ -0.53
BBX-208ENST00000425868 HAX1O00165 279 aa11.7□□□□□ -0.54
BBX-208ENST00000425868 LMOD2Q6P5Q4 547 aa11.7□□□□□ -0.54
BBX-208ENST00000425868 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
BBX-208ENST00000425868 MFSD10Q14728 455 aa11.69□□□□□ -0.54
BBX-208ENST00000425868 ILDR1Q86SU0 546 aaPredicted RBP11.69□□□□□ -0.54
BBX-208ENST00000425868 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
BBX-208ENST00000425868 TRIM35Q9UPQ4 493 aa11.69□□□□□ -0.54
BBX-208ENST00000425868 CLCN6P51797 869 aa11.67□□□□□ -0.54
BBX-208ENST00000425868 SEMA3EO15041 775 aa11.65□□□□□ -0.54
BBX-208ENST00000425868 EVX2Q03828 476 aa11.63□□□□□ -0.55
BBX-208ENST00000425868 TESPA1A2RU30 521 aaPredicted RBP11.62□□□□□ -0.55
BBX-208ENST00000425868 CAMK2BQ13554 666 aa11.6□□□□□ -0.55
BBX-208ENST00000425868 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
BBX-208ENST00000425868 GPHNQ9NQX3 736 aaPredicted RBP11.6□□□□□ -0.55
BBX-208ENST00000425868 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
BBX-208ENST00000425868 ATN1P54259 1190 aaPredicted RBP11.58□□□□□ -0.56
BBX-208ENST00000425868 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
BBX-208ENST00000425868 SMYD5Q6GMV2 418 aa11.56□□□□□ -0.56
BBX-208ENST00000425868 ATMINO43313 823 aaPredicted RBP11.55□□□□□ -0.56
BBX-208ENST00000425868 MICALL2Q8IY33 904 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms