RNA–Protein interactions for RNA: ENST00000425658.1

AFF4-205, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 5

Gene AFF4, Length 513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-205ENST00000425658 ZNF579Q8NAF0 562 aaKnown RBP11.86□□□□□ -0.51
AFF4-205ENST00000425658 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
AFF4-205ENST00000425658 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
AFF4-205ENST00000425658 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.52
AFF4-205ENST00000425658 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
AFF4-205ENST00000425658 CLCN6P51797 869 aa11.77□□□□□ -0.53
AFF4-205ENST00000425658 PYGBP11216 843 aa11.76□□□□□ -0.53
AFF4-205ENST00000425658 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
AFF4-205ENST00000425658 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
AFF4-205ENST00000425658 GABBR2O75899 941 aa11.72□□□□□ -0.53
AFF4-205ENST00000425658 MAP3K13O43283 966 aa11.71□□□□□ -0.53
AFF4-205ENST00000425658 CHRM1P11229 460 aaPredicted RBP11.7□□□□□ -0.54
AFF4-205ENST00000425658 PKD2Q13563 968 aa11.69□□□□□ -0.54
AFF4-205ENST00000425658 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
AFF4-205ENST00000425658 SGIP1Q9BQI5 828 aa11.68□□□□□ -0.54
AFF4-205ENST00000425658 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
AFF4-205ENST00000425658 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
AFF4-205ENST00000425658 ECM2O94769 699 aaPredicted RBP11.66□□□□□ -0.54
AFF4-205ENST00000425658 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
AFF4-205ENST00000425658 ZNF467Q7Z7K2 595 aaPredicted RBP11.62□□□□□ -0.55
AFF4-205ENST00000425658 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
AFF4-205ENST00000425658 PCDHB8Q9UN66 801 aa11.59□□□□□ -0.55
AFF4-205ENST00000425658 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
AFF4-205ENST00000425658 DCBLD2Q96PD2 775 aa11.56□□□□□ -0.56
AFF4-205ENST00000425658 RNF25Q96BH1 459 aaPredicted RBP11.55□□□□□ -0.56
AFF4-205ENST00000425658 RIOK3O14730 519 aaKnown RBP11.54□□□□□ -0.56
AFF4-205ENST00000425658 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
AFF4-205ENST00000425658 RGL2O15211 777 aa11.53□□□□□ -0.56
AFF4-205ENST00000425658 TIE1P35590 1138 aa11.52□□□□□ -0.57
AFF4-205ENST00000425658 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
AFF4-205ENST00000425658 TAOK2Q9UL54 1235 aa11.5□□□□□ -0.57
AFF4-205ENST00000425658 VGFO15240 615 aaPredicted RBP11.49□□□□□ -0.57
AFF4-205ENST00000425658 PSEN1P49768 467 aa11.48□□□□□ -0.57
AFF4-205ENST00000425658 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
AFF4-205ENST00000425658 BMP2KQ9NSY1 1161 aaPredicted RBP11.48□□□□□ -0.57
AFF4-205ENST00000425658 ASTLQ6HA08 431 aaPredicted RBP11.47□□□□□ -0.57
AFF4-205ENST00000425658 TTLL13PA6NNM8 815 aa11.46□□□□□ -0.57
AFF4-205ENST00000425658 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
AFF4-205ENST00000425658 ATMINO43313 823 aaPredicted RBP11.45□□□□□ -0.58
AFF4-205ENST00000425658 ATN1P54259 1190 aaPredicted RBP11.43□□□□□ -0.58
AFF4-205ENST00000425658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.42□□□□□ -0.58
AFF4-205ENST00000425658 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
AFF4-205ENST00000425658 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
AFF4-205ENST00000425658 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
AFF4-205ENST00000425658 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
AFF4-205ENST00000425658 STK25O00506 426 aa11.36□□□□□ -0.59
AFF4-205ENST00000425658 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
AFF4-205ENST00000425658 BCL11BQ9C0K0 894 aaPredicted RBP11.35□□□□□ -0.59
AFF4-205ENST00000425658 CABP2Q9NPB3 220 aa11.35□□□□□ -0.59
AFF4-205ENST00000425658 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
AFF4-205ENST00000425658 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
AFF4-205ENST00000425658 CHGAP10645 457 aaKnown RBP11.32□□□□□ -0.6
AFF4-205ENST00000425658 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
AFF4-205ENST00000425658 IER5LQ5T953 404 aa11.31□□□□□ -0.6
AFF4-205ENST00000425658 C7P10643 843 aa11.3□□□□□ -0.6
AFF4-205ENST00000425658 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
AFF4-205ENST00000425658 METRNQ9UJH8 293 aa11.3□□□□□ -0.6
AFF4-205ENST00000425658 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
AFF4-205ENST00000425658 SEC24BO95487 1268 aa11.25□□□□□ -0.61
AFF4-205ENST00000425658 SOX12O15370 315 aa11.22□□□□□ -0.61
AFF4-205ENST00000425658 PLCG2P16885 1265 aa11.22□□□□□ -0.61
AFF4-205ENST00000425658 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
AFF4-205ENST00000425658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.21□□□□□ -0.612e-9■■■□□ 15.8
AFF4-205ENST00000425658 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
AFF4-205ENST00000425658 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
AFF4-205ENST00000425658 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
AFF4-205ENST00000425658 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
AFF4-205ENST00000425658 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
AFF4-205ENST00000425658 PHF8Q9UPP1 1060 aa11.16□□□□□ -0.62
AFF4-205ENST00000425658 NLRP6P59044 892 aa11.15□□□□□ -0.62
AFF4-205ENST00000425658 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
AFF4-205ENST00000425658 MFRPQ9BY79 579 aa11.14□□□□□ -0.63
AFF4-205ENST00000425658 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
AFF4-205ENST00000425658 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
AFF4-205ENST00000425658 BBXQ8WY36 941 aaPredicted RBP11.11□□□□□ -0.63
AFF4-205ENST00000425658 POTEB2H3BUK9 544 aa11.09□□□□□ -0.63
AFF4-205ENST00000425658 LHX8Q68G74 356 aa11.09□□□□□ -0.63
AFF4-205ENST00000425658 MS4A4AQ96JQ5 239 aa11.09□□□□□ -0.63
AFF4-205ENST00000425658 RYDENQ9NUL5 291 aaKnown RBP11.09□□□□□ -0.63
AFF4-205ENST00000425658 DPY19L2Q6NUT2 758 aa11.08□□□□□ -0.64
AFF4-205ENST00000425658 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
AFF4-205ENST00000425658 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.06□□□□□ -0.64
AFF4-205ENST00000425658 G3V3G9 751 aa11.04□□□□□ -0.64
AFF4-205ENST00000425658 POTEJP0CG39 1038 aa11.02□□□□□ -0.65
AFF4-205ENST00000425658 MAMSTRQ6ZN01 415 aa11.02□□□□□ -0.65
AFF4-205ENST00000425658 BOLA1Q9Y3E2 137 aa11.02□□□□□ -0.65
AFF4-205ENST00000425658 GTPBP6O43824 516 aaPredicted RBP11.01□□□□□ -0.65
AFF4-205ENST00000425658 SCUBE2Q9NQ36 999 aa11□□□□□ -0.65
AFF4-205ENST00000425658 PPP1R37O75864 691 aa10.97□□□□□ -0.65
AFF4-205ENST00000425658 C3orf67Q6ZVT6 689 aa10.97□□□□□ -0.65
AFF4-205ENST00000425658 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
AFF4-205ENST00000425658 SPRYD3Q8NCJ5 442 aa10.97□□□□□ -0.65
AFF4-205ENST00000425658 TMEM121BQ9BXQ6 578 aaPredicted RBP10.96□□□□□ -0.65
AFF4-205ENST00000425658 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.95□□□□□ -0.66
AFF4-205ENST00000425658 PAXIP1Q6ZW49 1069 aaPredicted RBP10.94□□□□□ -0.66
AFF4-205ENST00000425658 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
AFF4-205ENST00000425658 CFAP44Q96MT7 982 aa10.94□□□□□ -0.66
AFF4-205ENST00000425658 SLAIN1Q8ND83 568 aa10.87□□□□□ -0.67
AFF4-205ENST00000425658 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
AFF4-205ENST00000425658 TMEM92Q6UXU6 159 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms