RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 HS6ST3Q8IZP7 471 aa11.04□□□□□ -0.64
LINC00400-201ENST00000425609 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
LINC00400-201ENST00000425609 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
LINC00400-201ENST00000425609 BCANQ96GW7 911 aa11.02□□□□□ -0.65
LINC00400-201ENST00000425609 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
LINC00400-201ENST00000425609 DCAF8Q5TAQ9 597 aa10.98□□□□□ -0.65
LINC00400-201ENST00000425609 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
LINC00400-201ENST00000425609 FAM212AQ96EL1 285 aa10.97□□□□□ -0.65
LINC00400-201ENST00000425609 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
LINC00400-201ENST00000425609 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
LINC00400-201ENST00000425609 RASEFQ8IZ41 740 aa10.94□□□□□ -0.66
LINC00400-201ENST00000425609 CHRM1P11229 460 aaPredicted RBP10.92□□□□□ -0.66
LINC00400-201ENST00000425609 NKX1-1Q15270 411 aaPredicted RBP10.9□□□□□ -0.66
LINC00400-201ENST00000425609 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
LINC00400-201ENST00000425609 VGFO15240 615 aaPredicted RBP10.88□□□□□ -0.67
LINC00400-201ENST00000425609 SGIP1Q9BQI5 828 aa10.85□□□□□ -0.67
LINC00400-201ENST00000425609 STK25O00506 426 aa10.83□□□□□ -0.68
LINC00400-201ENST00000425609 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
LINC00400-201ENST00000425609 PYGBP11216 843 aa10.81□□□□□ -0.68
LINC00400-201ENST00000425609 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
LINC00400-201ENST00000425609 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.79□□□□□ -0.68
LINC00400-201ENST00000425609 ZFP91Q96JP5 570 aaPredicted RBP10.79□□□□□ -0.68
LINC00400-201ENST00000425609 CHADLQ6NUI6 762 aa10.77□□□□□ -0.69
LINC00400-201ENST00000425609 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
LINC00400-201ENST00000425609 STK24Q9Y6E0 443 aa10.75□□□□□ -0.69
LINC00400-201ENST00000425609 FARP1Q9Y4F1 1045 aaPredicted RBP10.72□□□□□ -0.69
LINC00400-201ENST00000425609 POTEHQ6S545 545 aa10.69□□□□□ -0.7
LINC00400-201ENST00000425609 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
LINC00400-201ENST00000425609 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
LINC00400-201ENST00000425609 ZNF467Q7Z7K2 595 aaPredicted RBP10.67□□□□□ -0.7
LINC00400-201ENST00000425609 RYDENQ9NUL5 291 aaKnown RBP10.67□□□□□ -0.7
LINC00400-201ENST00000425609 CCDC61Q9Y6R9 512 aa10.65□□□□□ -0.7
LINC00400-201ENST00000425609 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
LINC00400-201ENST00000425609 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC00400-201ENST00000425609 PDAP1Q13442 181 aaKnown RBP10.62□□□□□ -0.71
LINC00400-201ENST00000425609 NBR1Q14596 966 aa10.62□□□□□ -0.71
LINC00400-201ENST00000425609 PCDHB8Q9UN66 801 aa10.6□□□□□ -0.71
LINC00400-201ENST00000425609 PCDHB13Q9Y5F0 798 aa10.6□□□□□ -0.71
LINC00400-201ENST00000425609 ZNF579Q8NAF0 562 aaKnown RBP10.58□□□□□ -0.72
LINC00400-201ENST00000425609 PSEN1P49768 467 aa10.55□□□□□ -0.72
LINC00400-201ENST00000425609 MFRPQ9BY79 579 aa10.53□□□□□ -0.72
LINC00400-201ENST00000425609 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
LINC00400-201ENST00000425609 PIP4P2Q8N4L2 257 aa10.52□□□□□ -0.73
LINC00400-201ENST00000425609 CHRDL2Q6WN34 429 aa10.51□□□□□ -0.73
LINC00400-201ENST00000425609 IFNL1Q8IU54 200 aa10.51□□□□□ -0.73
LINC00400-201ENST00000425609 KIF12Q96FN5 646 aa10.5□□□□□ -0.73
LINC00400-201ENST00000425609 PAK3O75914 559 aaPredicted RBP10.49□□□□□ -0.73
LINC00400-201ENST00000425609 MAP3K13O43283 966 aa10.48□□□□□ -0.73
LINC00400-201ENST00000425609 P3H3Q8IVL6 736 aa10.45□□□□□ -0.74
LINC00400-201ENST00000425609 FBXO22Q8NEZ5 403 aa10.44□□□□□ -0.74
LINC00400-201ENST00000425609 EFCAB3Q8N7B9 438 aa10.42□□□□□ -0.74
LINC00400-201ENST00000425609 PPP1R37O75864 691 aa10.41□□□□□ -0.74
LINC00400-201ENST00000425609 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
LINC00400-201ENST00000425609 CABP2Q9NPB3 220 aa10.41□□□□□ -0.74
LINC00400-201ENST00000425609 SOX12O15370 315 aa10.39□□□□□ -0.75
LINC00400-201ENST00000425609 NLRP6P59044 892 aa10.39□□□□□ -0.75
LINC00400-201ENST00000425609 PHF8Q9UPP1 1060 aa10.39□□□□□ -0.75
LINC00400-201ENST00000425609 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
LINC00400-201ENST00000425609 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
LINC00400-201ENST00000425609 CD44P16070 742 aaKnown RBP10.37□□□□□ -0.75
LINC00400-201ENST00000425609 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
LINC00400-201ENST00000425609 MS4A4AQ96JQ5 239 aa10.32□□□□□ -0.76
LINC00400-201ENST00000425609 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
LINC00400-201ENST00000425609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
LINC00400-201ENST00000425609 NCKAP5LQ9HCH0 1330 aa10.27□□□□□ -0.77
LINC00400-201ENST00000425609 ARHGEF1Q92888 912 aaKnown RBP10.26□□□□□ -0.77
LINC00400-201ENST00000425609 MS4A3Q96HJ5 214 aa10.26□□□□□ -0.77
LINC00400-201ENST00000425609 TMEM106CQ9BVX2 250 aa10.26□□□□□ -0.77
LINC00400-201ENST00000425609 C19orf67A6NJJ6 358 aa10.25□□□□□ -0.77
LINC00400-201ENST00000425609 E2F4Q16254 413 aa10.25□□□□□ -0.77
LINC00400-201ENST00000425609 LMOD2Q6P5Q4 547 aa10.24□□□□□ -0.77
LINC00400-201ENST00000425609 MFSD10Q14728 455 aa10.23□□□□□ -0.77
LINC00400-201ENST00000425609 CRISPLD2Q9H0B8 497 aa10.22□□□□□ -0.77
LINC00400-201ENST00000425609 GOLGA2Q08379 1002 aa10.2□□□□□ -0.78
LINC00400-201ENST00000425609 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
LINC00400-201ENST00000425609 PDE4AP27815 886 aa10.19□□□□□ -0.78
LINC00400-201ENST00000425609 LARP6Q9BRS8 491 aaKnown RBP10.19□□□□□ -0.78
LINC00400-201ENST00000425609 TIE1P35590 1138 aa10.18□□□□□ -0.78
LINC00400-201ENST00000425609 TESPA1A2RU30 521 aaPredicted RBP10.17□□□□□ -0.78
LINC00400-201ENST00000425609 TTLL13PA6NNM8 815 aa10.17□□□□□ -0.78
LINC00400-201ENST00000425609 MKRN3Q13064 507 aaKnown RBP10.17□□□□□ -0.78
LINC00400-201ENST00000425609 SEMA3EO15041 775 aa10.16□□□□□ -0.78
LINC00400-201ENST00000425609 ARIH1Q9Y4X5 557 aaPredicted RBP10.16□□□□□ -0.78
LINC00400-201ENST00000425609 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
LINC00400-201ENST00000425609 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
LINC00400-201ENST00000425609 BMP2KQ9NSY1 1161 aaPredicted RBP10.14□□□□□ -0.79
LINC00400-201ENST00000425609 TULP1O00294 542 aaPredicted RBP10.13□□□□□ -0.79
LINC00400-201ENST00000425609 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
LINC00400-201ENST00000425609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC00400-201ENST00000425609 GALR2O43603 387 aaPredicted RBP10.09□□□□□ -0.79
LINC00400-201ENST00000425609 TRIM35Q9UPQ4 493 aa10.08□□□□□ -0.8
LINC00400-201ENST00000425609 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
LINC00400-201ENST00000425609 PPP1R15BQ5SWA1 713 aa10.05□□□□□ -0.8
LINC00400-201ENST00000425609 TMEM132AQ24JP5 1023 aa10.04□□□□□ -0.8
LINC00400-201ENST00000425609 DPY19L2Q6NUT2 758 aa10.04□□□□□ -0.8
LINC00400-201ENST00000425609 PDCD7Q8N8D1 485 aaKnown RBP10.03□□□□□ -0.8
LINC00400-201ENST00000425609 MICALL2Q8IY33 904 aa10.02□□□□□ -0.81
LINC00400-201ENST00000425609 EVX2Q03828 476 aa10.01□□□□□ -0.81
LINC00400-201ENST00000425609 SMYD5Q6GMV2 418 aa10.01□□□□□ -0.81
LINC00400-201ENST00000425609 CLCN6P51797 869 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms