RNA–Protein interactions for RNA: ENST00000425322.1

AC006041.1-201, humanhuman

TSL 3 BASIC

Gene AC006041.1, Length 328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006041.1-201ENST00000425322 SLC39A7Q92504 469 aa17.1■□□□□ 0.33
AC006041.1-201ENST00000425322 PLSCR2Q9NRY7 297 aa17.1■□□□□ 0.33
AC006041.1-201ENST00000425322 C7P10643 843 aa17.09■□□□□ 0.33
AC006041.1-201ENST00000425322 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
AC006041.1-201ENST00000425322 TSPYL2Q9H2G4 693 aaPredicted RBP17.05■□□□□ 0.32
AC006041.1-201ENST00000425322 POTEJP0CG39 1038 aa17.03■□□□□ 0.32
AC006041.1-201ENST00000425322 POTEMA6NI47 508 aa17■□□□□ 0.31
AC006041.1-201ENST00000425322 KIF12Q96FN5 646 aa16.99■□□□□ 0.31
AC006041.1-201ENST00000425322 ATN1P54259 1190 aaPredicted RBP16.96■□□□□ 0.31
AC006041.1-201ENST00000425322 POTEGQ6S5H5 508 aa16.94■□□□□ 0.3
AC006041.1-201ENST00000425322 MAMSTRQ6ZN01 415 aa16.94■□□□□ 0.3
AC006041.1-201ENST00000425322 BMP2KQ9NSY1 1161 aaPredicted RBP16.89■□□□□ 0.29
AC006041.1-201ENST00000425322 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
AC006041.1-201ENST00000425322 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
AC006041.1-201ENST00000425322 TRPC6Q9Y210 931 aa16.86■□□□□ 0.29
AC006041.1-201ENST00000425322 POTEFA5A3E0 1075 aa16.84■□□□□ 0.29
AC006041.1-201ENST00000425322 MAP3K13O43283 966 aa16.84■□□□□ 0.29
AC006041.1-201ENST00000425322 TIE1P35590 1138 aa16.84■□□□□ 0.29
AC006041.1-201ENST00000425322 MIER1Q8N108 512 aa16.83■□□□□ 0.28
AC006041.1-201ENST00000425322 SCUBE2Q9NQ36 999 aa16.8■□□□□ 0.28
AC006041.1-201ENST00000425322 LCE2DQ5TA82 110 aaPredicted RBP16.79■□□□□ 0.28
AC006041.1-201ENST00000425322 PCDH10Q9P2E7 1040 aa16.79■□□□□ 0.28
AC006041.1-201ENST00000425322 TTLL13PA6NNM8 815 aa16.72■□□□□ 0.27
AC006041.1-201ENST00000425322 SGIP1Q9BQI5 828 aa16.7■□□□□ 0.26
AC006041.1-201ENST00000425322 PLCD3Q8N3E9 789 aa16.66■□□□□ 0.26
AC006041.1-201ENST00000425322 COLQQ9Y215 455 aaPredicted RBP16.66■□□□□ 0.26
AC006041.1-201ENST00000425322 NUBP1P53384 320 aa16.64■□□□□ 0.25
AC006041.1-201ENST00000425322 FAM163AQ96GL9 167 aaPredicted RBP16.64■□□□□ 0.25
AC006041.1-201ENST00000425322 IER5LQ5T953 404 aa16.63■□□□□ 0.25
AC006041.1-201ENST00000425322 ZBTB47Q9UFB7 747 aaPredicted RBP16.62■□□□□ 0.25
AC006041.1-201ENST00000425322 PCDHB13Q9Y5F0 798 aa16.61■□□□□ 0.25
AC006041.1-201ENST00000425322 SEC24BO95487 1268 aa16.6■□□□□ 0.25
AC006041.1-201ENST00000425322 TRIM35Q9UPQ4 493 aa16.6■□□□□ 0.25
AC006041.1-201ENST00000425322 IFNL1Q8IU54 200 aa16.53■□□□□ 0.24
AC006041.1-201ENST00000425322 FAM212AQ96EL1 285 aa16.49■□□□□ 0.23
AC006041.1-201ENST00000425322 TMEM106CQ9BVX2 250 aa16.44■□□□□ 0.22
AC006041.1-201ENST00000425322 FKBP8Q14318 412 aa16.42■□□□□ 0.22
AC006041.1-201ENST00000425322 IRX5P78411 483 aaPredicted RBP16.38■□□□□ 0.21
AC006041.1-201ENST00000425322 PLCG2P16885 1265 aa16.36■□□□□ 0.21
AC006041.1-201ENST00000425322 SLAIN1Q8ND83 568 aa16.36■□□□□ 0.21
AC006041.1-201ENST00000425322 CDAN1Q8IWY9 1227 aa16.31■□□□□ 0.2
AC006041.1-201ENST00000425322 ST18O60284 1047 aa16.29■□□□□ 0.2
AC006041.1-201ENST00000425322 PYGBP11216 843 aa16.25■□□□□ 0.19
AC006041.1-201ENST00000425322 OCEL1Q9H607 264 aa16.25■□□□□ 0.19
AC006041.1-201ENST00000425322 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
AC006041.1-201ENST00000425322 PCDHB8Q9UN66 801 aa16.19■□□□□ 0.18
AC006041.1-201ENST00000425322 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
AC006041.1-201ENST00000425322 TMEM121BQ9BXQ6 578 aaPredicted RBP16.14■□□□□ 0.17
AC006041.1-201ENST00000425322 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.11■□□□□ 0.17
AC006041.1-201ENST00000425322 SNPHO15079 494 aa16.08■□□□□ 0.16
AC006041.1-201ENST00000425322 PDCD7Q8N8D1 485 aaKnown RBP16.08■□□□□ 0.16
AC006041.1-201ENST00000425322 GSE1Q14687 1217 aa16.05■□□□□ 0.16
AC006041.1-201ENST00000425322 ZNF467Q7Z7K2 595 aaPredicted RBP16.05■□□□□ 0.16
AC006041.1-201ENST00000425322 CHRM1P11229 460 aaPredicted RBP16.02■□□□□ 0.16
AC006041.1-201ENST00000425322 VASPP50552 380 aaPredicted RBP16■□□□□ 0.15
AC006041.1-201ENST00000425322 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
AC006041.1-201ENST00000425322 SPNS2Q8IVW8 549 aa15.95■□□□□ 0.14
AC006041.1-201ENST00000425322 KLHL34Q8N239 644 aa15.95■□□□□ 0.14
AC006041.1-201ENST00000425322 L3MBTL3Q96JM7 780 aaPredicted RBP15.95■□□□□ 0.14
AC006041.1-201ENST00000425322 MMRN1Q13201 1228 aa15.94■□□□□ 0.14
AC006041.1-201ENST00000425322 C3orf67Q6ZVT6 689 aa15.94■□□□□ 0.14
AC006041.1-201ENST00000425322 MARVELD3Q96A59 401 aa15.94■□□□□ 0.14
AC006041.1-201ENST00000425322 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
AC006041.1-201ENST00000425322 ILDR1Q86SU0 546 aaPredicted RBP15.91■□□□□ 0.14
AC006041.1-201ENST00000425322 PSEN1P49768 467 aa15.9■□□□□ 0.14
AC006041.1-201ENST00000425322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.89■□□□□ 0.13
AC006041.1-201ENST00000425322 EMP3P54852 163 aa15.82■□□□□ 0.12
AC006041.1-201ENST00000425322 PDAP1Q13442 181 aaKnown RBP15.82■□□□□ 0.12
AC006041.1-201ENST00000425322 POTEB3A0JP26 581 aa15.75■□□□□ 0.11
AC006041.1-201ENST00000425322 POTEBQ6S5H4 581 aa15.75■□□□□ 0.11
AC006041.1-201ENST00000425322 DPY19L2Q6NUT2 758 aa15.74■□□□□ 0.11
AC006041.1-201ENST00000425322 HS3ST6Q96QI5 342 aa15.74■□□□□ 0.11
AC006041.1-201ENST00000425322 KRTAP3-3Q9BYR6 98 aa15.74■□□□□ 0.11
AC006041.1-201ENST00000425322 KRTAP3-2Q9BYR7 98 aa15.74■□□□□ 0.11
AC006041.1-201ENST00000425322 SPOCK2Q92563 424 aa15.7■□□□□ 0.1
AC006041.1-201ENST00000425322 CABP2Q9NPB3 220 aa15.7■□□□□ 0.1
AC006041.1-201ENST00000425322 IFNLR1Q8IU57 520 aaPredicted RBP15.69■□□□□ 0.1
AC006041.1-201ENST00000425322 BOLA1Q9Y3E2 137 aa15.69■□□□□ 0.1
AC006041.1-201ENST00000425322 FAM205CA6NFA0 338 aa15.68■□□□□ 0.1
AC006041.1-201ENST00000425322 HOXB3P14651 431 aaPredicted RBP15.66■□□□□ 0.1
AC006041.1-201ENST00000425322 CIZ1Q9ULV3 898 aaPredicted RBP15.63■□□□□ 0.09
AC006041.1-201ENST00000425322 G3V3G9 751 aa15.61■□□□□ 0.09
AC006041.1-201ENST00000425322 HOXB1P14653 301 aaPredicted RBP15.57■□□□□ 0.08
AC006041.1-201ENST00000425322 DOK7Q18PE1 504 aa15.52■□□□□ 0.08
AC006041.1-201ENST00000425322 ZNF710Q8N1W2 664 aa15.5■□□□□ 0.07
AC006041.1-201ENST00000425322 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
AC006041.1-201ENST00000425322 EFCAB3Q8N7B9 438 aa15.48■□□□□ 0.07
AC006041.1-201ENST00000425322 ERBB3P21860 1342 aa15.43■□□□□ 0.06
AC006041.1-201ENST00000425322 RIMBP2O15034 1052 aa15.4■□□□□ 0.06
AC006041.1-201ENST00000425322 MICALL2Q8IY33 904 aa15.4■□□□□ 0.06
AC006041.1-201ENST00000425322 TMEM92Q6UXU6 159 aa15.39■□□□□ 0.05
AC006041.1-201ENST00000425322 ZSWIM6Q9HCJ5 1215 aa15.37■□□□□ 0.05
AC006041.1-201ENST00000425322 VARS2Q5ST30 1063 aaKnown RBP15.34■□□□□ 0.05
AC006041.1-201ENST00000425322 SOX12O15370 315 aa15.33■□□□□ 0.04
AC006041.1-201ENST00000425322 MS4A4AQ96JQ5 239 aa15.32■□□□□ 0.04
AC006041.1-201ENST00000425322 RIOK3O14730 519 aaKnown RBP15.29■□□□□ 0.04
AC006041.1-201ENST00000425322 GPR153Q6NV75 609 aa15.29■□□□□ 0.04
AC006041.1-201ENST00000425322 RNF166Q96A37 237 aaPredicted RBP15.29■□□□□ 0.04
AC006041.1-201ENST00000425322 RNF25Q96BH1 459 aaPredicted RBP15.29■□□□□ 0.04
AC006041.1-201ENST00000425322 ZNF687Q8N1G0 1237 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms