RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 NUBP1P53384 320 aa8.8□□□□□ -1
SF3B1-205ENST00000424674 DCBLD2Q96PD2 775 aa8.8□□□□□ -1
SF3B1-205ENST00000424674 POTEIP0CG38 1075 aa8.79□□□□□ -1
SF3B1-205ENST00000424674 MS4A3Q96HJ5 214 aa8.77□□□□□ -1.01
SF3B1-205ENST00000424674 FAM212AQ96EL1 285 aa8.76□□□□□ -1.01
SF3B1-205ENST00000424674 KLHL34Q8N239 644 aa8.75□□□□□ -1.01
SF3B1-205ENST00000424674 KIF12Q96FN5 646 aa8.74□□□□□ -1.01
SF3B1-205ENST00000424674 MAP3K13O43283 966 aa8.7□□□□□ -1.02
SF3B1-205ENST00000424674 DCAF8Q5TAQ9 597 aa8.68□□□□□ -1.02
SF3B1-205ENST00000424674 IFNLR1Q8IU57 520 aaPredicted RBP8.68□□□□□ -1.02
SF3B1-205ENST00000424674 ASTLQ6HA08 431 aaPredicted RBP8.66□□□□□ -1.02
SF3B1-205ENST00000424674 SGIP1Q9BQI5 828 aa8.66□□□□□ -1.02
SF3B1-205ENST00000424674 PCDHB13Q9Y5F0 798 aa8.66□□□□□ -1.02
SF3B1-205ENST00000424674 LHX8Q68G74 356 aa8.65□□□□□ -1.02
SF3B1-205ENST00000424674 ATMINO43313 823 aaPredicted RBP8.64□□□□□ -1.03
SF3B1-205ENST00000424674 GSE1Q14687 1217 aa8.64□□□□□ -1.03
SF3B1-205ENST00000424674 SPOCK2Q92563 424 aa8.63□□□□□ -1.03
SF3B1-205ENST00000424674 TRPC6Q9Y210 931 aa8.63□□□□□ -1.03
SF3B1-205ENST00000424674 PYGBP11216 843 aa8.62□□□□□ -1.03
SF3B1-205ENST00000424674 TIE1P35590 1138 aa8.62□□□□□ -1.03
SF3B1-205ENST00000424674 IFNL1Q8IU54 200 aa8.61□□□□□ -1.03
SF3B1-205ENST00000424674 PELP1Q8IZL8 1130 aaKnown RBP8.61□□□□□ -1.03
SF3B1-205ENST00000424674 BMP2KQ9NSY1 1161 aaPredicted RBP8.61□□□□□ -1.03
SF3B1-205ENST00000424674 ATN1P54259 1190 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-205ENST00000424674 SLC39A7Q92504 469 aa8.59□□□□□ -1.03
SF3B1-205ENST00000424674 TTLL13PA6NNM8 815 aa8.57□□□□□ -1.04
SF3B1-205ENST00000424674 METRNQ9UJH8 293 aa8.57□□□□□ -1.04
SF3B1-205ENST00000424674 C7P10643 843 aa8.56□□□□□ -1.04
SF3B1-205ENST00000424674 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
SF3B1-205ENST00000424674 PCDHB8Q9UN66 801 aa8.53□□□□□ -1.04
SF3B1-205ENST00000424674 CHRM1P11229 460 aaPredicted RBP8.52□□□□□ -1.05
SF3B1-205ENST00000424674 ZNF467Q7Z7K2 595 aaPredicted RBP8.52□□□□□ -1.05
SF3B1-205ENST00000424674 TMEM106CQ9BVX2 250 aa8.52□□□□□ -1.05
SF3B1-205ENST00000424674 TRIM35Q9UPQ4 493 aa8.52□□□□□ -1.05
SF3B1-205ENST00000424674 POTEB2H3BUK9 544 aa8.5□□□□□ -1.05
SF3B1-205ENST00000424674 IER5LQ5T953 404 aa8.48□□□□□ -1.05
SF3B1-205ENST00000424674 TRIM41Q8WV44 630 aa8.47□□□□□ -1.05
SF3B1-205ENST00000424674 SEC24BO95487 1268 aa8.46□□□□□ -1.06
SF3B1-205ENST00000424674 POTEFA5A3E0 1075 aa8.45□□□□□ -1.06
SF3B1-205ENST00000424674 OTUD5Q96G74 571 aa8.43□□□□□ -1.06
SF3B1-205ENST00000424674 COLQQ9Y215 455 aaPredicted RBP8.43□□□□□ -1.06
SF3B1-205ENST00000424674 PSEN1P49768 467 aa8.42□□□□□ -1.06
SF3B1-205ENST00000424674 PDAP1Q13442 181 aaKnown RBP8.42□□□□□ -1.06
SF3B1-205ENST00000424674 MAMSTRQ6ZN01 415 aa8.41□□□□□ -1.06
SF3B1-205ENST00000424674 POTEJP0CG39 1038 aa8.4□□□□□ -1.06
SF3B1-205ENST00000424674 PLCG2P16885 1265 aa8.4□□□□□ -1.06
SF3B1-205ENST00000424674 GOLGA2Q08379 1002 aa8.4□□□□□ -1.06
SF3B1-205ENST00000424674 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
SF3B1-205ENST00000424674 SCUBE2Q9NQ36 999 aa8.38□□□□□ -1.07
SF3B1-205ENST00000424674 MKRN3Q13064 507 aaKnown RBP8.35□□□□□ -1.07
SF3B1-205ENST00000424674 OCEL1Q9H607 264 aa8.35□□□□□ -1.07
SF3B1-205ENST00000424674 RNF25Q96BH1 459 aaPredicted RBP8.34□□□□□ -1.07
SF3B1-205ENST00000424674 RIOK3O14730 519 aaKnown RBP8.33□□□□□ -1.08
SF3B1-205ENST00000424674 CABP2Q9NPB3 220 aa8.33□□□□□ -1.08
SF3B1-205ENST00000424674 VGFO15240 615 aaPredicted RBP8.3□□□□□ -1.08
SF3B1-205ENST00000424674 PDCD7Q8N8D1 485 aaKnown RBP8.3□□□□□ -1.08
SF3B1-205ENST00000424674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.29□□□□□ -1.085e-26■■■■□ 21.4
SF3B1-205ENST00000424674 ECM2O94769 699 aaPredicted RBP8.28□□□□□ -1.08
SF3B1-205ENST00000424674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.27□□□□□ -1.09
SF3B1-205ENST00000424674 PKD2Q13563 968 aa8.27□□□□□ -1.09
SF3B1-205ENST00000424674 ZFP91Q96JP5 570 aaPredicted RBP8.27□□□□□ -1.09
SF3B1-205ENST00000424674 ILDR1Q86SU0 546 aaPredicted RBP8.26□□□□□ -1.09
SF3B1-205ENST00000424674 TAOK2Q9UL54 1235 aa8.26□□□□□ -1.09
SF3B1-205ENST00000424674 EFCAB3Q8N7B9 438 aa8.24□□□□□ -1.09
SF3B1-205ENST00000424674 SLAIN1Q8ND83 568 aa8.23□□□□□ -1.09
SF3B1-205ENST00000424674 L3MBTL3Q96JM7 780 aaPredicted RBP8.23□□□□□ -1.09
SF3B1-205ENST00000424674 RGL2O15211 777 aa8.21□□□□□ -1.1
SF3B1-205ENST00000424674 C3orf67Q6ZVT6 689 aa8.21□□□□□ -1.1
SF3B1-205ENST00000424674 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.21□□□□□ -1.1
SF3B1-205ENST00000424674 BCL11BQ9C0K0 894 aaPredicted RBP8.2□□□□□ -1.1
SF3B1-205ENST00000424674 DPY19L2Q6NUT2 758 aa8.19□□□□□ -1.1
SF3B1-205ENST00000424674 G3V3G9 751 aa8.18□□□□□ -1.1
SF3B1-205ENST00000424674 SOX12O15370 315 aa8.18□□□□□ -1.1
SF3B1-205ENST00000424674 STK24Q9Y6E0 443 aa8.18□□□□□ -1.1
SF3B1-205ENST00000424674 STK25O00506 426 aa8.17□□□□□ -1.1
SF3B1-205ENST00000424674 BOLA1Q9Y3E2 137 aa8.16□□□□□ -1.1
SF3B1-205ENST00000424674 SLC24A1O60721 1099 aa8.15□□□□□ -1.1
SF3B1-205ENST00000424674 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
SF3B1-205ENST00000424674 FAM163AQ96GL9 167 aaPredicted RBP8.15□□□□□ -1.1
SF3B1-205ENST00000424674 POTEMA6NI47 508 aa8.14□□□□□ -1.11
SF3B1-205ENST00000424674 PHF8Q9UPP1 1060 aa8.14□□□□□ -1.11
SF3B1-205ENST00000424674 POTEGQ6S5H5 508 aa8.12□□□□□ -1.11
SF3B1-205ENST00000424674 MS4A4AQ96JQ5 239 aa8.12□□□□□ -1.11
SF3B1-205ENST00000424674 NLRP6P59044 892 aa8.11□□□□□ -1.11
SF3B1-205ENST00000424674 SNPHO15079 494 aa8.1□□□□□ -1.11
SF3B1-205ENST00000424674 TMEM121BQ9BXQ6 578 aaPredicted RBP8.1□□□□□ -1.11
SF3B1-205ENST00000424674 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
SF3B1-205ENST00000424674 FBXO22Q8NEZ5 403 aa8.09□□□□□ -1.11
SF3B1-205ENST00000424674 MFRPQ9BY79 579 aa8.09□□□□□ -1.11
SF3B1-205ENST00000424674 ST18O60284 1047 aa8.07□□□□□ -1.12
SF3B1-205ENST00000424674 HS6ST3Q8IZP7 471 aa8.05□□□□□ -1.12
SF3B1-205ENST00000424674 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
SF3B1-205ENST00000424674 TMEM92Q6UXU6 159 aa8.01□□□□□ -1.13
SF3B1-205ENST00000424674 PCDH10Q9P2E7 1040 aa7.99□□□□□ -1.13
SF3B1-205ENST00000424674 HOXB3P14651 431 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-205ENST00000424674 DOK7Q18PE1 504 aa7.97□□□□□ -1.13
SF3B1-205ENST00000424674 MARVELD3Q96A59 401 aa7.96□□□□□ -1.14
SF3B1-205ENST00000424674 ZNF710Q8N1W2 664 aa7.95□□□□□ -1.14
SF3B1-205ENST00000424674 DNAJC5Q9H3Z4 198 aa7.95□□□□□ -1.14
SF3B1-205ENST00000424674 RIMBP2O15034 1052 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms