RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 TMC1Q8TDI8 760 aa14.74□□□□□ -0.05
SCN5A-205ENST00000423572 ZRSR1Q15695 479 aaKnown RBP14.72□□□□□ -0.05
SCN5A-205ENST00000423572 ANP32AP39687 249 aaKnown RBP14.72□□□□□ -0.05
SCN5A-205ENST00000423572 PPM1GO15355 546 aaPredicted RBP14.72□□□□□ -0.05
SCN5A-205ENST00000423572 PRM3Q9NNZ6 103 aa14.71□□□□□ -0.05
SCN5A-205ENST00000423572 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
SCN5A-205ENST00000423572 SALL2Q9Y467 1007 aaPredicted RBP14.68□□□□□ -0.06
SCN5A-205ENST00000423572 TAOK2Q9UL54 1235 aa14.67□□□□□ -0.06
SCN5A-205ENST00000423572 MLECQ14165 292 aa14.67□□□□□ -0.06
SCN5A-205ENST00000423572 TONSLQ96HA7 1378 aa14.66□□□□□ -0.06
SCN5A-205ENST00000423572 HDGFP51858 240 aaKnown RBP14.66□□□□□ -0.06
SCN5A-205ENST00000423572 G3V3G9 751 aa14.65□□□□□ -0.06
SCN5A-205ENST00000423572 DCAF8Q5TAQ9 597 aa14.65□□□□□ -0.06
SCN5A-205ENST00000423572 POGKQ9P215 609 aa14.63□□□□□ -0.07
SCN5A-205ENST00000423572 CHIC2Q9UKJ5 165 aa14.63□□□□□ -0.07
SCN5A-205ENST00000423572 MEX3CQ5U5Q3 659 aaKnown RBP14.61□□□□□ -0.07
SCN5A-205ENST00000423572 NCLP19338 710 aaKnown RBP14.59□□□□□ -0.07
SCN5A-205ENST00000423572 PLEKHD1A6NEE1 506 aa14.58□□□□□ -0.07
SCN5A-205ENST00000423572 CASC1Q6TDU7 716 aa14.57□□□□□ -0.08
SCN5A-205ENST00000423572 OS9Q13438 667 aaPredicted RBP14.57□□□□□ -0.08
SCN5A-205ENST00000423572 CFAP53Q96M91 514 aa14.57□□□□□ -0.08
SCN5A-205ENST00000423572 FGD1P98174 961 aa14.54□□□□□ -0.08
SCN5A-205ENST00000423572 ACIN1Q9UKV3 1341 aaKnown RBP14.54□□□□□ -0.08
SCN5A-205ENST00000423572 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
SCN5A-205ENST00000423572 CSB-PGBD3P0DP91 1061 aa14.52□□□□□ -0.08
SCN5A-205ENST00000423572 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.08
SCN5A-205ENST00000423572 LAS1LQ9Y4W2 734 aaKnown RBP14.52□□□□□ -0.08
SCN5A-205ENST00000423572 FOXD1Q16676 465 aa14.52□□□□□ -0.09
SCN5A-205ENST00000423572 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.51□□□□□ -0.09
SCN5A-205ENST00000423572 MTUS2Q5JR59 1369 aa14.51□□□□□ -0.09
SCN5A-205ENST00000423572 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
SCN5A-205ENST00000423572 ZNF330Q9Y3S2 320 aaPredicted RBP14.49□□□□□ -0.09
SCN5A-205ENST00000423572 MSH5O43196 834 aa14.48□□□□□ -0.09
SCN5A-205ENST00000423572 GLIPR1L2Q4G1C9 344 aa14.48□□□□□ -0.09
SCN5A-205ENST00000423572 PAK3O75914 559 aaPredicted RBP14.48□□□□□ -0.09
SCN5A-205ENST00000423572 SOX12O15370 315 aa14.48□□□□□ -0.09
SCN5A-205ENST00000423572 KLHL34Q8N239 644 aa14.48□□□□□ -0.09
SCN5A-205ENST00000423572 EIF5BO60841 1220 aaKnown RBP14.46□□□□□ -0.09
SCN5A-205ENST00000423572 TRIM44Q96DX7 344 aaPredicted RBP14.46□□□□□ -0.1
SCN5A-205ENST00000423572 MAPK8IP3Q9UPT6 1336 aa14.45□□□□□ -0.1
SCN5A-205ENST00000423572 FKBP8Q14318 412 aa14.45□□□□□ -0.1
SCN5A-205ENST00000423572 KCNJ4P48050 445 aa14.45□□□□□ -0.1
SCN5A-205ENST00000423572 RGL3Q3MIN7 710 aa14.44□□□□□ -0.1
SCN5A-205ENST00000423572 CDCA8Q53HL2 280 aa14.44□□□□□ -0.1
SCN5A-205ENST00000423572 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
SCN5A-205ENST00000423572 ANP32EQ9BTT0 268 aa14.43□□□□□ -0.1
SCN5A-205ENST00000423572 TPRNQ4KMQ1 711 aa14.43□□□□□ -0.1
SCN5A-205ENST00000423572 FTSJ3Q8IY81 847 aaKnown RBP14.43□□□□□ -0.1
SCN5A-205ENST00000423572 KANK1Q14678 1352 aa14.41□□□□□ -0.1
SCN5A-205ENST00000423572 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
SCN5A-205ENST00000423572 NUDCQ9Y266 331 aa14.4□□□□□ -0.1
SCN5A-205ENST00000423572 CWC22Q9HCG8 908 aaKnown RBP14.4□□□□□ -0.1
SCN5A-205ENST00000423572 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
SCN5A-205ENST00000423572 KNSTRNQ9Y448 316 aa14.38□□□□□ -0.11
SCN5A-205ENST00000423572 GTF2E1P29083 439 aaPredicted RBP14.37□□□□□ -0.11
SCN5A-205ENST00000423572 PNNQ9H307 717 aaKnown RBP14.37□□□□□ -0.11
SCN5A-205ENST00000423572 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCN5A-205ENST00000423572 GOLGA6L22H0YM25 854 aa14.35□□□□□ -0.11
SCN5A-205ENST00000423572 GNL2Q13823 731 aaKnown RBP14.35□□□□□ -0.11
SCN5A-205ENST00000423572 SRPK2P78362 688 aaKnown RBP14.34□□□□□ -0.11
SCN5A-205ENST00000423572 GOLGA6L6A8MZA4 724 aa14.34□□□□□ -0.11
SCN5A-205ENST00000423572 RTF1Q92541 710 aaKnown RBP14.34□□□□□ -0.11
SCN5A-205ENST00000423572 EID1Q9Y6B2 187 aa14.33□□□□□ -0.12
SCN5A-205ENST00000423572 KIAA2012Q0VF49 1180 aa14.32□□□□□ -0.12
SCN5A-205ENST00000423572 CFDP1Q9UEE9 299 aaPredicted RBP14.32□□□□□ -0.12
SCN5A-205ENST00000423572 CCDC136Q96JN2 1154 aa14.31□□□□□ -0.12
SCN5A-205ENST00000423572 TAF7LQ5H9L4 462 aa14.3□□□□□ -0.12
SCN5A-205ENST00000423572 EVA1CP58658 441 aa14.3□□□□□ -0.12
SCN5A-205ENST00000423572 SF3B2Q13435 895 aaKnown RBP14.29□□□□□ -0.12
SCN5A-205ENST00000423572 TNNT2P45379 298 aaPredicted RBP14.29□□□□□ -0.12
SCN5A-205ENST00000423572 U2SURPO15042 1029 aaKnown RBP14.29□□□□□ -0.12
SCN5A-205ENST00000423572 VPS53Q5VIR6 699 aa14.29□□□□□ -0.12
SCN5A-205ENST00000423572 FRAT2O75474 233 aaPredicted RBP14.29□□□□□ -0.12
SCN5A-205ENST00000423572 CTDP1Q9Y5B0 961 aaPredicted RBP14.28□□□□□ -0.12
SCN5A-205ENST00000423572 CHMP4BQ9H444 224 aaKnown RBP14.28□□□□□ -0.12
SCN5A-205ENST00000423572 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
SCN5A-205ENST00000423572 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
SCN5A-205ENST00000423572 BECN1Q14457 450 aa14.27□□□□□ -0.12
SCN5A-205ENST00000423572 CHAF1AQ13111 956 aaPredicted RBP14.26□□□□□ -0.13
SCN5A-205ENST00000423572 PTMAP06454 111 aaKnown RBP14.26□□□□□ -0.13
SCN5A-205ENST00000423572 NEUROD2Q15784 382 aa14.26□□□□□ -0.13
SCN5A-205ENST00000423572 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
SCN5A-205ENST00000423572 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
SCN5A-205ENST00000423572 TRIM34Q9BYJ4 488 aa14.26□□□□□ -0.13
SCN5A-205ENST00000423572 NRDCO43847 1150 aa14.25□□□□□ -0.13
SCN5A-205ENST00000423572 GORABQ5T7V8 394 aa14.25□□□□□ -0.13
SCN5A-205ENST00000423572 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
SCN5A-205ENST00000423572 TCEAL9Q9UHQ7 104 aa14.25□□□□□ -0.13
SCN5A-205ENST00000423572 L1TD1Q5T7N2 865 aaKnown RBP14.25□□□□□ -0.13
SCN5A-205ENST00000423572 MRS2Q9HD23 443 aa14.24□□□□□ -0.13
SCN5A-205ENST00000423572 GGT6Q6P531 493 aa14.23□□□□□ -0.13
SCN5A-205ENST00000423572 SAFB2Q14151 953 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCN5A-205ENST00000423572 NOC3LQ8WTT2 800 aaKnown RBP14.21□□□□□ -0.13
SCN5A-205ENST00000423572 GOLGA6L4A6NEF3 574 aa14.2□□□□□ -0.14
SCN5A-205ENST00000423572 STK26Q9P289 416 aa14.2□□□□□ -0.14
SCN5A-205ENST00000423572 NBR1Q14596 966 aa14.19□□□□□ -0.14
SCN5A-205ENST00000423572 DNTTIP2Q5QJE6 756 aaKnown RBP14.19□□□□□ -0.14
SCN5A-205ENST00000423572 DDX10Q13206 875 aaKnown RBP14.18□□□□□ -0.14
SCN5A-205ENST00000423572 PPP1R1BQ9UD71 204 aaPredicted RBP14.18□□□□□ -0.14
SCN5A-205ENST00000423572 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms