RNA–Protein interactions for RNA: ENST00000421322.1

XIST-203, X inactive specific transcript, humanhuman

TSL 2

Gene XIST, Length 446 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-203ENST00000421322 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
XIST-203ENST00000421322 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
XIST-203ENST00000421322 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
XIST-203ENST00000421322 SCUBE2Q9NQ36 999 aa11.67□□□□□ -0.54
XIST-203ENST00000421322 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
XIST-203ENST00000421322 POTEJP0CG39 1038 aa11.59□□□□□ -0.55
XIST-203ENST00000421322 FAM163AQ96GL9 167 aaPredicted RBP11.59□□□□□ -0.55
XIST-203ENST00000421322 LCE2DQ5TA82 110 aaPredicted RBP11.54□□□□□ -0.56
XIST-203ENST00000421322 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
XIST-203ENST00000421322 TSPYL2Q9H2G4 693 aaPredicted RBP11.49□□□□□ -0.57
XIST-203ENST00000421322 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
XIST-203ENST00000421322 CCDC61Q9Y6R9 512 aa11.47□□□□□ -0.57
XIST-203ENST00000421322 TIE1P35590 1138 aa11.44□□□□□ -0.58
XIST-203ENST00000421322 KIF12Q96FN5 646 aa11.44□□□□□ -0.58
XIST-203ENST00000421322 BMP2KQ9NSY1 1161 aaPredicted RBP11.43□□□□□ -0.58
XIST-203ENST00000421322 SEC24BO95487 1268 aa11.4□□□□□ -0.58
XIST-203ENST00000421322 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
XIST-203ENST00000421322 CDAN1Q8IWY9 1227 aa11.39□□□□□ -0.59
XIST-203ENST00000421322 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
XIST-203ENST00000421322 IER5LQ5T953 404 aa11.34□□□□□ -0.59
XIST-203ENST00000421322 MAP3K13O43283 966 aa11.33□□□□□ -0.6
XIST-203ENST00000421322 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
XIST-203ENST00000421322 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
XIST-203ENST00000421322 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
XIST-203ENST00000421322 PROM2Q8N271 834 aa11.28□□□□□ -0.6
XIST-203ENST00000421322 SGIP1Q9BQI5 828 aa11.28□□□□□ -0.6
XIST-203ENST00000421322 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
XIST-203ENST00000421322 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
XIST-203ENST00000421322 ST18O60284 1047 aa11.22□□□□□ -0.61
XIST-203ENST00000421322 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
XIST-203ENST00000421322 MIER1Q8N108 512 aa11.21□□□□□ -0.61
XIST-203ENST00000421322 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
XIST-203ENST00000421322 TMEM121BQ9BXQ6 578 aaPredicted RBP11.18□□□□□ -0.62
XIST-203ENST00000421322 PLCG2P16885 1265 aa11.17□□□□□ -0.62
XIST-203ENST00000421322 SNPHO15079 494 aa11.15□□□□□ -0.62
XIST-203ENST00000421322 MMRN1Q13201 1228 aa11.14□□□□□ -0.63
XIST-203ENST00000421322 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
XIST-203ENST00000421322 SPNS2Q8IVW8 549 aa11.11□□□□□ -0.63
XIST-203ENST00000421322 TMEM106CQ9BVX2 250 aa11.09□□□□□ -0.63
XIST-203ENST00000421322 PLCD3Q8N3E9 789 aa11.08□□□□□ -0.64
XIST-203ENST00000421322 IFNL1Q8IU54 200 aa11.06□□□□□ -0.64
XIST-203ENST00000421322 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
XIST-203ENST00000421322 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
XIST-203ENST00000421322 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
XIST-203ENST00000421322 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
XIST-203ENST00000421322 OCEL1Q9H607 264 aa11.02□□□□□ -0.65
XIST-203ENST00000421322 NUBP1P53384 320 aa11□□□□□ -0.65
XIST-203ENST00000421322 MARVELD3Q96A59 401 aa10.95□□□□□ -0.66
XIST-203ENST00000421322 EMP3P54852 163 aa10.91□□□□□ -0.66
XIST-203ENST00000421322 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
XIST-203ENST00000421322 L3MBTL3Q96JM7 780 aaPredicted RBP10.86□□□□□ -0.67
XIST-203ENST00000421322 DCAF8Q5TAQ9 597 aa10.82□□□□□ -0.68
XIST-203ENST00000421322 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
XIST-203ENST00000421322 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
XIST-203ENST00000421322 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
XIST-203ENST00000421322 KRTAP3-2Q9BYR7 98 aa10.8□□□□□ -0.68
XIST-203ENST00000421322 FAM205CA6NFA0 338 aa10.79□□□□□ -0.68
XIST-203ENST00000421322 PYGBP11216 843 aa10.79□□□□□ -0.68
XIST-203ENST00000421322 MKRN3Q13064 507 aaKnown RBP10.78□□□□□ -0.68
XIST-203ENST00000421322 PDCD7Q8N8D1 485 aaKnown RBP10.78□□□□□ -0.68
XIST-203ENST00000421322 PCDHB8Q9UN66 801 aa10.76□□□□□ -0.69
XIST-203ENST00000421322 ZNF467Q7Z7K2 595 aaPredicted RBP10.75□□□□□ -0.69
XIST-203ENST00000421322 POTEB3A0JP26 581 aa10.7□□□□□ -0.7
XIST-203ENST00000421322 POTEBQ6S5H4 581 aa10.7□□□□□ -0.7
XIST-203ENST00000421322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.7
XIST-203ENST00000421322 GSE1Q14687 1217 aa10.67□□□□□ -0.7
XIST-203ENST00000421322 G3V3G9 751 aa10.66□□□□□ -0.7
XIST-203ENST00000421322 ZNF710Q8N1W2 664 aa10.63□□□□□ -0.71
XIST-203ENST00000421322 RNF166Q96A37 237 aaPredicted RBP10.63□□□□□ -0.71
XIST-203ENST00000421322 HOXB1P14653 301 aaPredicted RBP10.61□□□□□ -0.71
XIST-203ENST00000421322 PSEN1P49768 467 aa10.6□□□□□ -0.71
XIST-203ENST00000421322 DOK7Q18PE1 504 aa10.6□□□□□ -0.71
XIST-203ENST00000421322 CHRM1P11229 460 aaPredicted RBP10.59□□□□□ -0.71
XIST-203ENST00000421322 ILDR1Q86SU0 546 aaPredicted RBP10.59□□□□□ -0.71
XIST-203ENST00000421322 ERBB3P21860 1342 aa10.58□□□□□ -0.71
XIST-203ENST00000421322 FBXO3Q9UK99 471 aa10.58□□□□□ -0.72
XIST-203ENST00000421322 RIMBP2O15034 1052 aa10.57□□□□□ -0.72
XIST-203ENST00000421322 HOXB3P14651 431 aaPredicted RBP10.57□□□□□ -0.72
XIST-203ENST00000421322 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
XIST-203ENST00000421322 MYT1LQ9UL68 1186 aa10.55□□□□□ -0.72
XIST-203ENST00000421322 PTGER2P43116 358 aa10.53□□□□□ -0.72
XIST-203ENST00000421322 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
XIST-203ENST00000421322 KLHL34Q8N239 644 aa10.51□□□□□ -0.73
XIST-203ENST00000421322 FKBP8Q14318 412 aa10.5□□□□□ -0.73
XIST-203ENST00000421322 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
XIST-203ENST00000421322 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
XIST-203ENST00000421322 ZSWIM6Q9HCJ5 1215 aa10.46□□□□□ -0.73
XIST-203ENST00000421322 CABP2Q9NPB3 220 aa10.46□□□□□ -0.73
XIST-203ENST00000421322 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
XIST-203ENST00000421322 VASPP50552 380 aaPredicted RBP10.38□□□□□ -0.75
XIST-203ENST00000421322 GPR153Q6NV75 609 aa10.3□□□□□ -0.76
XIST-203ENST00000421322 ANKRD13DQ6ZTN6 518 aa10.29□□□□□ -0.76
XIST-203ENST00000421322 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
XIST-203ENST00000421322 CIZ1Q9ULV3 898 aaPredicted RBP10.28□□□□□ -0.76
XIST-203ENST00000421322 SPOCK2Q92563 424 aa10.26□□□□□ -0.77
XIST-203ENST00000421322 EFCAB3Q8N7B9 438 aa10.25□□□□□ -0.77
XIST-203ENST00000421322 LSM11P83369 360 aaKnown RBP eCLIP10.24□□□□□ -0.77
XIST-203ENST00000421322 ZNF316A6NFI3 1004 aaPredicted RBP10.23□□□□□ -0.77
XIST-203ENST00000421322 TMEM92Q6UXU6 159 aa10.23□□□□□ -0.77
XIST-203ENST00000421322 TRIM41Q8WV44 630 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms