RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
VPS8-202ENST00000421069 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS8-202ENST00000421069 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
VPS8-202ENST00000421069 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
VPS8-202ENST00000421069 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
VPS8-202ENST00000421069 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
VPS8-202ENST00000421069 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
VPS8-202ENST00000421069 HS6ST3Q8IZP7 471 aa11.32□□□□□ -0.6
VPS8-202ENST00000421069 HAP1P54257 671 aaPredicted RBP11.31□□□□□ -0.6
VPS8-202ENST00000421069 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
VPS8-202ENST00000421069 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
VPS8-202ENST00000421069 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
VPS8-202ENST00000421069 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
VPS8-202ENST00000421069 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.61
VPS8-202ENST00000421069 PYGBP11216 843 aa11.26□□□□□ -0.61
VPS8-202ENST00000421069 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
VPS8-202ENST00000421069 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
VPS8-202ENST00000421069 CFAP44Q96MT7 982 aa11.24□□□□□ -0.61
VPS8-202ENST00000421069 TSPYL2Q9H2G4 693 aaPredicted RBP11.24□□□□□ -0.61
VPS8-202ENST00000421069 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
VPS8-202ENST00000421069 STK25O00506 426 aa11.18□□□□□ -0.62
VPS8-202ENST00000421069 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
VPS8-202ENST00000421069 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
VPS8-202ENST00000421069 ZNF467Q7Z7K2 595 aaPredicted RBP11.17□□□□□ -0.62
VPS8-202ENST00000421069 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.15□□□□□ -0.62
VPS8-202ENST00000421069 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
VPS8-202ENST00000421069 BCL11BQ9C0K0 894 aaPredicted RBP11.13□□□□□ -0.63
VPS8-202ENST00000421069 NKX1-1Q15270 411 aaPredicted RBP11.12□□□□□ -0.63
VPS8-202ENST00000421069 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
VPS8-202ENST00000421069 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
VPS8-202ENST00000421069 PDAP1Q13442 181 aaKnown RBP11.09□□□□□ -0.63
VPS8-202ENST00000421069 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
VPS8-202ENST00000421069 GTPBP6O43824 516 aaPredicted RBP11.08□□□□□ -0.64
VPS8-202ENST00000421069 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
VPS8-202ENST00000421069 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
VPS8-202ENST00000421069 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
VPS8-202ENST00000421069 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
VPS8-202ENST00000421069 KIF12Q96FN5 646 aa11.05□□□□□ -0.64
VPS8-202ENST00000421069 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
VPS8-202ENST00000421069 MAP3K13O43283 966 aa11.02□□□□□ -0.65
VPS8-202ENST00000421069 PSEN1P49768 467 aa11.02□□□□□ -0.65
VPS8-202ENST00000421069 ZRANB1Q9UGI0 708 aa11.02□□□□□ -0.65
VPS8-202ENST00000421069 IFNL1Q8IU54 200 aa11□□□□□ -0.65
VPS8-202ENST00000421069 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.65
VPS8-202ENST00000421069 BCANQ96GW7 911 aa10.95□□□□□ -0.66
VPS8-202ENST00000421069 PHF12Q96QT6 1004 aa10.93□□□□□ -0.66
VPS8-202ENST00000421069 SOX12O15370 315 aa10.87□□□□□ -0.67
VPS8-202ENST00000421069 MFRPQ9BY79 579 aa10.87□□□□□ -0.67
VPS8-202ENST00000421069 CABP2Q9NPB3 220 aa10.86□□□□□ -0.67
VPS8-202ENST00000421069 EFCAB3Q8N7B9 438 aa10.84□□□□□ -0.67
VPS8-202ENST00000421069 NLRP6P59044 892 aa10.83□□□□□ -0.68
VPS8-202ENST00000421069 MS4A3Q96HJ5 214 aa10.83□□□□□ -0.68
VPS8-202ENST00000421069 FBXO22Q8NEZ5 403 aa10.81□□□□□ -0.68
VPS8-202ENST00000421069 CLCN6P51797 869 aa10.8□□□□□ -0.68
VPS8-202ENST00000421069 TMEM106CQ9BVX2 250 aa10.8□□□□□ -0.68
VPS8-202ENST00000421069 PHF8Q9UPP1 1060 aa10.78□□□□□ -0.68
VPS8-202ENST00000421069 TIE1P35590 1138 aa10.77□□□□□ -0.69
VPS8-202ENST00000421069 HAX1O00165 279 aa10.76□□□□□ -0.69
VPS8-202ENST00000421069 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
VPS8-202ENST00000421069 GOLGA2Q08379 1002 aa10.75□□□□□ -0.69
VPS8-202ENST00000421069 PPP1R37O75864 691 aa10.73□□□□□ -0.69
VPS8-202ENST00000421069 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
VPS8-202ENST00000421069 CADPS2Q86UW7 1296 aa10.72□□□□□ -0.69
VPS8-202ENST00000421069 TTLL13PA6NNM8 815 aa10.71□□□□□ -0.69
VPS8-202ENST00000421069 NBR1Q14596 966 aa10.7□□□□□ -0.7
VPS8-202ENST00000421069 GALR2O43603 387 aaPredicted RBP10.69□□□□□ -0.7
VPS8-202ENST00000421069 MS4A4AQ96JQ5 239 aa10.69□□□□□ -0.7
VPS8-202ENST00000421069 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
VPS8-202ENST00000421069 EVX2Q03828 476 aa10.68□□□□□ -0.7
VPS8-202ENST00000421069 WDR70Q9NW82 654 aa10.68□□□□□ -0.7
VPS8-202ENST00000421069 P3H3Q8IVL6 736 aa10.67□□□□□ -0.7
VPS8-202ENST00000421069 ILDR1Q86SU0 546 aaPredicted RBP10.66□□□□□ -0.7
VPS8-202ENST00000421069 TRIM35Q9UPQ4 493 aa10.63□□□□□ -0.71
VPS8-202ENST00000421069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.62□□□□□ -0.713e-6■■■□□ 14.8
VPS8-202ENST00000421069 PDE4AP27815 886 aa10.58□□□□□ -0.72
VPS8-202ENST00000421069 ASTLQ6HA08 431 aaPredicted RBP10.58□□□□□ -0.72
VPS8-202ENST00000421069 ATMINO43313 823 aaPredicted RBP10.57□□□□□ -0.72
VPS8-202ENST00000421069 ATN1P54259 1190 aaPredicted RBP10.56□□□□□ -0.72
VPS8-202ENST00000421069 IER5LQ5T953 404 aa10.56□□□□□ -0.72
VPS8-202ENST00000421069 KCNV2Q8TDN2 545 aa10.56□□□□□ -0.72
VPS8-202ENST00000421069 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
VPS8-202ENST00000421069 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
VPS8-202ENST00000421069 GABBR2O75899 941 aa10.54□□□□□ -0.72
VPS8-202ENST00000421069 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
VPS8-202ENST00000421069 MFSD10Q14728 455 aa10.54□□□□□ -0.72
VPS8-202ENST00000421069 E2F4Q16254 413 aa10.54□□□□□ -0.72
VPS8-202ENST00000421069 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
VPS8-202ENST00000421069 POTEHQ6S545 545 aa10.53□□□□□ -0.72
VPS8-202ENST00000421069 ARHGEF1Q92888 912 aaKnown RBP10.52□□□□□ -0.73
VPS8-202ENST00000421069 LARP6Q9BRS8 491 aaKnown RBP10.52□□□□□ -0.73
VPS8-202ENST00000421069 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
VPS8-202ENST00000421069 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
VPS8-202ENST00000421069 OCEL1Q9H607 264 aa10.51□□□□□ -0.73
VPS8-202ENST00000421069 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
VPS8-202ENST00000421069 DDX27Q96GQ7 796 aaKnown RBP10.49□□□□□ -0.73
VPS8-202ENST00000421069 MICALL2Q8IY33 904 aa10.46□□□□□ -0.73
VPS8-202ENST00000421069 GPHNQ9NQX3 736 aaPredicted RBP10.46□□□□□ -0.73
VPS8-202ENST00000421069 DCBLD2Q96PD2 775 aa10.45□□□□□ -0.74
VPS8-202ENST00000421069 TMEM121BQ9BXQ6 578 aaPredicted RBP10.45□□□□□ -0.74
VPS8-202ENST00000421069 ARIH1Q9Y4X5 557 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms