RNA–Protein interactions for RNA: ENST00000421012.1

MDH1-204, Transcript of malate dehydrogenase 1, humanhuman

TSL 4

Gene MDH1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-204ENST00000421012 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
MDH1-204ENST00000421012 PAK3O75914 559 aaPredicted RBP8.56□□□□□ -1.04
MDH1-204ENST00000421012 ZBTB47Q9UFB7 747 aaPredicted RBP8.56□□□□□ -1.04
MDH1-204ENST00000421012 TRPC6Q9Y210 931 aa8.56□□□□□ -1.04
MDH1-204ENST00000421012 KIF12Q96FN5 646 aa8.55□□□□□ -1.04
MDH1-204ENST00000421012 MS4A3Q96HJ5 214 aa8.55□□□□□ -1.04
MDH1-204ENST00000421012 MAP3K13O43283 966 aa8.53□□□□□ -1.04
MDH1-204ENST00000421012 DCAF8Q5TAQ9 597 aa8.5□□□□□ -1.05
MDH1-204ENST00000421012 PYGBP11216 843 aa8.49□□□□□ -1.05
MDH1-204ENST00000421012 FAM212AQ96EL1 285 aa8.49□□□□□ -1.05
MDH1-204ENST00000421012 PELP1Q8IZL8 1130 aaKnown RBP8.48□□□□□ -1.05
MDH1-204ENST00000421012 SPOCK2Q92563 424 aa8.48□□□□□ -1.05
MDH1-204ENST00000421012 CLCN6P51797 869 aa8.45□□□□□ -1.06
MDH1-204ENST00000421012 IFNL1Q8IU54 200 aa8.45□□□□□ -1.06
MDH1-204ENST00000421012 DCBLD2Q96PD2 775 aa8.43□□□□□ -1.06
MDH1-204ENST00000421012 PCDHB13Q9Y5F0 798 aa8.43□□□□□ -1.06
MDH1-204ENST00000421012 BMP2KQ9NSY1 1161 aaPredicted RBP8.42□□□□□ -1.06
MDH1-204ENST00000421012 ATMINO43313 823 aaPredicted RBP8.41□□□□□ -1.06
MDH1-204ENST00000421012 CIZ1Q9ULV3 898 aaPredicted RBP8.41□□□□□ -1.06
MDH1-204ENST00000421012 PCDHB8Q9UN66 801 aa8.41□□□□□ -1.06
MDH1-204ENST00000421012 ATN1P54259 1190 aaPredicted RBP8.4□□□□□ -1.06
MDH1-204ENST00000421012 ASTLQ6HA08 431 aaPredicted RBP8.4□□□□□ -1.06
MDH1-204ENST00000421012 GSE1Q14687 1217 aa8.39□□□□□ -1.07
MDH1-204ENST00000421012 TTLL13PA6NNM8 815 aa8.36□□□□□ -1.07
MDH1-204ENST00000421012 POTEB2H3BUK9 544 aa8.36□□□□□ -1.07
MDH1-204ENST00000421012 SGIP1Q9BQI5 828 aa8.36□□□□□ -1.07
MDH1-204ENST00000421012 CHRM1P11229 460 aaPredicted RBP8.35□□□□□ -1.07
MDH1-204ENST00000421012 POTEFA5A3E0 1075 aa8.33□□□□□ -1.08
MDH1-204ENST00000421012 TIE1P35590 1138 aa8.33□□□□□ -1.08
MDH1-204ENST00000421012 LHX8Q68G74 356 aa8.33□□□□□ -1.08
MDH1-204ENST00000421012 RNF25Q96BH1 459 aaPredicted RBP8.33□□□□□ -1.08
MDH1-204ENST00000421012 POTEJP0CG39 1038 aa8.31□□□□□ -1.08
MDH1-204ENST00000421012 PKD2Q13563 968 aa8.31□□□□□ -1.08
MDH1-204ENST00000421012 TMEM106CQ9BVX2 250 aa8.3□□□□□ -1.08
MDH1-204ENST00000421012 TRIM35Q9UPQ4 493 aa8.29□□□□□ -1.08
MDH1-204ENST00000421012 METRNQ9UJH8 293 aa8.28□□□□□ -1.08
MDH1-204ENST00000421012 COLQQ9Y215 455 aaPredicted RBP8.28□□□□□ -1.08
MDH1-204ENST00000421012 PSEN1P49768 467 aa8.25□□□□□ -1.09
MDH1-204ENST00000421012 ZNF467Q7Z7K2 595 aaPredicted RBP8.24□□□□□ -1.09
MDH1-204ENST00000421012 C7P10643 843 aa8.23□□□□□ -1.09
MDH1-204ENST00000421012 SLC39A7Q92504 469 aa8.23□□□□□ -1.09
MDH1-204ENST00000421012 RGL2O15211 777 aa8.21□□□□□ -1.1
MDH1-204ENST00000421012 ECM2O94769 699 aaPredicted RBP8.2□□□□□ -1.1
MDH1-204ENST00000421012 OTUD5Q96G74 571 aa8.2□□□□□ -1.1
MDH1-204ENST00000421012 IRX5P78411 483 aaPredicted RBP8.19□□□□□ -1.1
MDH1-204ENST00000421012 PDAP1Q13442 181 aaKnown RBP8.19□□□□□ -1.1
MDH1-204ENST00000421012 TRIM41Q8WV44 630 aa8.19□□□□□ -1.1
MDH1-204ENST00000421012 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.18□□□□□ -1.1
MDH1-204ENST00000421012 RIOK3O14730 519 aaKnown RBP8.18□□□□□ -1.1
MDH1-204ENST00000421012 ZFP91Q96JP5 570 aaPredicted RBP8.18□□□□□ -1.1
MDH1-204ENST00000421012 CABP2Q9NPB3 220 aa8.16□□□□□ -1.1
MDH1-204ENST00000421012 IER5LQ5T953 404 aa8.15□□□□□ -1.1
MDH1-204ENST00000421012 PDCD7Q8N8D1 485 aaKnown RBP8.14□□□□□ -1.11
MDH1-204ENST00000421012 EFCAB3Q8N7B9 438 aa8.13□□□□□ -1.11
MDH1-204ENST00000421012 SEC24BO95487 1268 aa8.12□□□□□ -1.11
MDH1-204ENST00000421012 DPY19L2Q6NUT2 758 aa8.12□□□□□ -1.11
MDH1-204ENST00000421012 VGFO15240 615 aaPredicted RBP8.11□□□□□ -1.11
MDH1-204ENST00000421012 ILDR1Q86SU0 546 aaPredicted RBP8.11□□□□□ -1.11
MDH1-204ENST00000421012 OCEL1Q9H607 264 aa8.1□□□□□ -1.11
MDH1-204ENST00000421012 PLCG2P16885 1265 aa8.08□□□□□ -1.12
MDH1-204ENST00000421012 MKRN3Q13064 507 aaKnown RBP8.08□□□□□ -1.12
MDH1-204ENST00000421012 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
MDH1-204ENST00000421012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.07□□□□□ -1.124e-11■□□□□ 8.9
MDH1-204ENST00000421012 GOLGA2Q08379 1002 aa8.06□□□□□ -1.12
MDH1-204ENST00000421012 MS4A4AQ96JQ5 239 aa8.06□□□□□ -1.12
MDH1-204ENST00000421012 PHF8Q9UPP1 1060 aa8.05□□□□□ -1.12
MDH1-204ENST00000421012 STK24Q9Y6E0 443 aa8.05□□□□□ -1.12
MDH1-204ENST00000421012 STK25O00506 426 aa8.04□□□□□ -1.12
MDH1-204ENST00000421012 PLSCR2Q9NRY7 297 aa8.03□□□□□ -1.12
MDH1-204ENST00000421012 MFRPQ9BY79 579 aa8.02□□□□□ -1.13
MDH1-204ENST00000421012 FBXO22Q8NEZ5 403 aa8.01□□□□□ -1.13
MDH1-204ENST00000421012 RTN4Q9NQC3 1192 aaKnown RBP8.01□□□□□ -1.13
MDH1-204ENST00000421012 SCUBE2Q9NQ36 999 aa7.98□□□□□ -1.13
MDH1-204ENST00000421012 SOX12O15370 315 aa7.97□□□□□ -1.13
MDH1-204ENST00000421012 CHGAP10645 457 aaKnown RBP7.97□□□□□ -1.13
MDH1-204ENST00000421012 NKX1-1Q15270 411 aaPredicted RBP7.97□□□□□ -1.13
MDH1-204ENST00000421012 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
MDH1-204ENST00000421012 MAMSTRQ6ZN01 415 aa7.96□□□□□ -1.14
MDH1-204ENST00000421012 PPP1R37O75864 691 aa7.95□□□□□ -1.14
MDH1-204ENST00000421012 HS6ST3Q8IZP7 471 aa7.95□□□□□ -1.14
MDH1-204ENST00000421012 TMEM92Q6UXU6 159 aa7.94□□□□□ -1.14
MDH1-204ENST00000421012 SLAIN1Q8ND83 568 aa7.94□□□□□ -1.14
MDH1-204ENST00000421012 TMEM121BQ9BXQ6 578 aaPredicted RBP7.94□□□□□ -1.14
MDH1-204ENST00000421012 BOLA1Q9Y3E2 137 aa7.94□□□□□ -1.14
MDH1-204ENST00000421012 TAOK2Q9UL54 1235 aa7.93□□□□□ -1.14
MDH1-204ENST00000421012 MICALL2Q8IY33 904 aa7.92□□□□□ -1.14
MDH1-204ENST00000421012 L3MBTL3Q96JM7 780 aaPredicted RBP7.92□□□□□ -1.14
MDH1-204ENST00000421012 NLRP6P59044 892 aa7.91□□□□□ -1.14
MDH1-204ENST00000421012 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.9□□□□□ -1.14
MDH1-204ENST00000421012 FAM163AQ96GL9 167 aaPredicted RBP7.88□□□□□ -1.15
MDH1-204ENST00000421012 DCAF8L2P0C7V8 631 aa7.87□□□□□ -1.15
MDH1-204ENST00000421012 AMER1Q5JTC6 1135 aaPredicted RBP7.87□□□□□ -1.15
MDH1-204ENST00000421012 C3orf67Q6ZVT6 689 aa7.87□□□□□ -1.15
MDH1-204ENST00000421012 DNAJC5Q9H3Z4 198 aa7.87□□□□□ -1.15
MDH1-204ENST00000421012 POTEMA6NI47 508 aa7.86□□□□□ -1.15
MDH1-204ENST00000421012 POTEGQ6S5H5 508 aa7.83□□□□□ -1.16
MDH1-204ENST00000421012 GTPBP6O43824 516 aaPredicted RBP7.82□□□□□ -1.16
MDH1-204ENST00000421012 ST18O60284 1047 aa7.82□□□□□ -1.16
MDH1-204ENST00000421012 HOXB3P14651 431 aaPredicted RBP7.81□□□□□ -1.16
MDH1-204ENST00000421012 G3V3G9 751 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms