RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
PTP4A1P1-201ENST00000420539 NPM1P06748 294 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTP4A1P1-201ENST00000420539 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTP4A1P1-201ENST00000420539 RASEFQ8IZ41 740 aa10.55□□□□□ -0.72
PTP4A1P1-201ENST00000420539 ARXQ96QS3 562 aa10.55□□□□□ -0.72
PTP4A1P1-201ENST00000420539 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
PTP4A1P1-201ENST00000420539 TRIM41Q8WV44 630 aa10.52□□□□□ -0.73
PTP4A1P1-201ENST00000420539 FARP1Q9Y4F1 1045 aaPredicted RBP10.49□□□□□ -0.73
PTP4A1P1-201ENST00000420539 TIMELESSQ9UNS1 1208 aa10.48□□□□□ -0.73
PTP4A1P1-201ENST00000420539 CHGAP10645 457 aaKnown RBP10.47□□□□□ -0.73
PTP4A1P1-201ENST00000420539 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
PTP4A1P1-201ENST00000420539 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.73
PTP4A1P1-201ENST00000420539 TPRNQ4KMQ1 711 aa10.46□□□□□ -0.73
PTP4A1P1-201ENST00000420539 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
PTP4A1P1-201ENST00000420539 PYGBP11216 843 aa10.45□□□□□ -0.74
PTP4A1P1-201ENST00000420539 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
PTP4A1P1-201ENST00000420539 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
PTP4A1P1-201ENST00000420539 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
PTP4A1P1-201ENST00000420539 PAXIP1Q6ZW49 1069 aaPredicted RBP10.39□□□□□ -0.75
PTP4A1P1-201ENST00000420539 CFAP44Q96MT7 982 aa10.39□□□□□ -0.75
PTP4A1P1-201ENST00000420539 TULP1O00294 542 aaPredicted RBP10.38□□□□□ -0.75
PTP4A1P1-201ENST00000420539 CHRM1P11229 460 aaPredicted RBP10.35□□□□□ -0.75
PTP4A1P1-201ENST00000420539 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
PTP4A1P1-201ENST00000420539 STK25O00506 426 aa10.32□□□□□ -0.76
PTP4A1P1-201ENST00000420539 VGFO15240 615 aaPredicted RBP10.32□□□□□ -0.76
PTP4A1P1-201ENST00000420539 PAK3O75914 559 aaPredicted RBP10.32□□□□□ -0.76
PTP4A1P1-201ENST00000420539 VSIG10Q8N0Z9 540 aa10.3□□□□□ -0.76
PTP4A1P1-201ENST00000420539 SPRYD3Q8NCJ5 442 aa10.3□□□□□ -0.76
PTP4A1P1-201ENST00000420539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.29□□□□□ -0.76
PTP4A1P1-201ENST00000420539 ZFP91Q96JP5 570 aaPredicted RBP10.29□□□□□ -0.76
PTP4A1P1-201ENST00000420539 CCDC61Q9Y6R9 512 aa10.29□□□□□ -0.76
PTP4A1P1-201ENST00000420539 HAX1O00165 279 aa10.28□□□□□ -0.76
PTP4A1P1-201ENST00000420539 STK24Q9Y6E0 443 aa10.28□□□□□ -0.76
PTP4A1P1-201ENST00000420539 BCL11BQ9C0K0 894 aaPredicted RBP10.27□□□□□ -0.77
PTP4A1P1-201ENST00000420539 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
PTP4A1P1-201ENST00000420539 PCDHB13Q9Y5F0 798 aa10.27□□□□□ -0.77
PTP4A1P1-201ENST00000420539 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
PTP4A1P1-201ENST00000420539 ZNF467Q7Z7K2 595 aaPredicted RBP10.25□□□□□ -0.77
PTP4A1P1-201ENST00000420539 HOMEZQ8IX15 550 aa10.24□□□□□ -0.77
PTP4A1P1-201ENST00000420539 ZRANB1Q9UGI0 708 aa10.24□□□□□ -0.77
PTP4A1P1-201ENST00000420539 NKX1-1Q15270 411 aaPredicted RBP10.22□□□□□ -0.77
PTP4A1P1-201ENST00000420539 C19orf67A6NJJ6 358 aa10.2□□□□□ -0.78
PTP4A1P1-201ENST00000420539 MAP3K13O43283 966 aa10.2□□□□□ -0.78
PTP4A1P1-201ENST00000420539 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
PTP4A1P1-201ENST00000420539 GTF3C3Q9Y5Q9 886 aa10.2□□□□□ -0.78
PTP4A1P1-201ENST00000420539 PDAP1Q13442 181 aaKnown RBP10.19□□□□□ -0.78
PTP4A1P1-201ENST00000420539 PHF12Q96QT6 1004 aa10.19□□□□□ -0.78
PTP4A1P1-201ENST00000420539 SGIP1Q9BQI5 828 aa10.19□□□□□ -0.78
PTP4A1P1-201ENST00000420539 KIF12Q96FN5 646 aa10.18□□□□□ -0.78
PTP4A1P1-201ENST00000420539 EVX2Q03828 476 aa10.17□□□□□ -0.78
PTP4A1P1-201ENST00000420539 IFNL1Q8IU54 200 aa10.17□□□□□ -0.78
PTP4A1P1-201ENST00000420539 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
PTP4A1P1-201ENST00000420539 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
PTP4A1P1-201ENST00000420539 PSEN1P49768 467 aa10.16□□□□□ -0.78
PTP4A1P1-201ENST00000420539 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
PTP4A1P1-201ENST00000420539 ERICH6Q7L0X2 663 aa10.14□□□□□ -0.79
PTP4A1P1-201ENST00000420539 KDM2AQ9Y2K7 1162 aa10.12□□□□□ -0.79
PTP4A1P1-201ENST00000420539 CABP2Q9NPB3 220 aa10.07□□□□□ -0.8
PTP4A1P1-201ENST00000420539 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
PTP4A1P1-201ENST00000420539 MS4A3Q96HJ5 214 aa10.06□□□□□ -0.8
PTP4A1P1-201ENST00000420539 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
PTP4A1P1-201ENST00000420539 RANGAP1P46060 587 aaPredicted RBP10.04□□□□□ -0.8
PTP4A1P1-201ENST00000420539 EFCAB3Q8N7B9 438 aa10.03□□□□□ -0.8
PTP4A1P1-201ENST00000420539 TRPC6Q9Y210 931 aa10.03□□□□□ -0.8
PTP4A1P1-201ENST00000420539 TMEM106CQ9BVX2 250 aa10.01□□□□□ -0.81
PTP4A1P1-201ENST00000420539 MFRPQ9BY79 579 aa10□□□□□ -0.81
PTP4A1P1-201ENST00000420539 GOLGA2Q08379 1002 aa9.98□□□□□ -0.81
PTP4A1P1-201ENST00000420539 TMEM132AQ24JP5 1023 aa9.98□□□□□ -0.81
PTP4A1P1-201ENST00000420539 PHF8Q9UPP1 1060 aa9.97□□□□□ -0.81
PTP4A1P1-201ENST00000420539 GABBR2O75899 941 aa9.96□□□□□ -0.82
PTP4A1P1-201ENST00000420539 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
PTP4A1P1-201ENST00000420539 NLRP6P59044 892 aa9.94□□□□□ -0.82
PTP4A1P1-201ENST00000420539 SOX12O15370 315 aa9.92□□□□□ -0.82
PTP4A1P1-201ENST00000420539 PPP1R37O75864 691 aa9.91□□□□□ -0.82
PTP4A1P1-201ENST00000420539 CLCN6P51797 869 aa9.91□□□□□ -0.82
PTP4A1P1-201ENST00000420539 FBXO22Q8NEZ5 403 aa9.91□□□□□ -0.82
PTP4A1P1-201ENST00000420539 TTLL13PA6NNM8 815 aa9.9□□□□□ -0.82
PTP4A1P1-201ENST00000420539 MKRN3Q13064 507 aaKnown RBP9.9□□□□□ -0.82
PTP4A1P1-201ENST00000420539 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
PTP4A1P1-201ENST00000420539 BMP2KQ9NSY1 1161 aaPredicted RBP9.9□□□□□ -0.82
PTP4A1P1-201ENST00000420539 TIE1P35590 1138 aa9.89□□□□□ -0.83
PTP4A1P1-201ENST00000420539 C14orf37Q86TY3 774 aa9.89□□□□□ -0.83
PTP4A1P1-201ENST00000420539 PODXL2Q9NZ53 605 aa9.89□□□□□ -0.83
PTP4A1P1-201ENST00000420539 TRIM35Q9UPQ4 493 aa9.86□□□□□ -0.83
PTP4A1P1-201ENST00000420539 MS4A4AQ96JQ5 239 aa9.85□□□□□ -0.83
PTP4A1P1-201ENST00000420539 NBR1Q14596 966 aa9.82□□□□□ -0.84
PTP4A1P1-201ENST00000420539 WDR70Q9NW82 654 aa9.82□□□□□ -0.84
PTP4A1P1-201ENST00000420539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.82□□□□□ -0.84
PTP4A1P1-201ENST00000420539 ATN1P54259 1190 aaPredicted RBP9.8□□□□□ -0.84
PTP4A1P1-201ENST00000420539 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
PTP4A1P1-201ENST00000420539 ATMINO43313 823 aaPredicted RBP9.77□□□□□ -0.85
PTP4A1P1-201ENST00000420539 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
PTP4A1P1-201ENST00000420539 POTEIP0CG38 1075 aa9.74□□□□□ -0.85
PTP4A1P1-201ENST00000420539 ASTLQ6HA08 431 aaPredicted RBP9.73□□□□□ -0.85
PTP4A1P1-201ENST00000420539 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
PTP4A1P1-201ENST00000420539 KCNV2Q8TDN2 545 aa9.71□□□□□ -0.86
PTP4A1P1-201ENST00000420539 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
PTP4A1P1-201ENST00000420539 NCKAP5LQ9HCH0 1330 aa9.71□□□□□ -0.86
PTP4A1P1-201ENST00000420539 ILDR1Q86SU0 546 aaPredicted RBP9.69□□□□□ -0.86
PTP4A1P1-201ENST00000420539 PDCD7Q8N8D1 485 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms