RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 LHX8Q68G74 356 aa11.29□□□□□ -0.6
LINC00993-201ENST00000420453 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
LINC00993-201ENST00000420453 RASEFQ8IZ41 740 aa11.27□□□□□ -0.61
LINC00993-201ENST00000420453 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
LINC00993-201ENST00000420453 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
LINC00993-201ENST00000420453 NUBP1P53384 320 aa11.2□□□□□ -0.62
LINC00993-201ENST00000420453 FAM212AQ96EL1 285 aa11.19□□□□□ -0.62
LINC00993-201ENST00000420453 VASPP50552 380 aaPredicted RBP11.16□□□□□ -0.62
LINC00993-201ENST00000420453 MAP3K13O43283 966 aa11.15□□□□□ -0.62
LINC00993-201ENST00000420453 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
LINC00993-201ENST00000420453 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
LINC00993-201ENST00000420453 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
LINC00993-201ENST00000420453 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
LINC00993-201ENST00000420453 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
LINC00993-201ENST00000420453 SGIP1Q9BQI5 828 aa11.1□□□□□ -0.63
LINC00993-201ENST00000420453 PCDHB13Q9Y5F0 798 aa11.1□□□□□ -0.63
LINC00993-201ENST00000420453 SLC39A7Q92504 469 aa11.09□□□□□ -0.63
LINC00993-201ENST00000420453 C7P10643 843 aa11.08□□□□□ -0.64
LINC00993-201ENST00000420453 TIE1P35590 1138 aa11.07□□□□□ -0.64
LINC00993-201ENST00000420453 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
LINC00993-201ENST00000420453 ATN1P54259 1190 aaPredicted RBP11.05□□□□□ -0.64
LINC00993-201ENST00000420453 BMP2KQ9NSY1 1161 aaPredicted RBP11.05□□□□□ -0.64
LINC00993-201ENST00000420453 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
LINC00993-201ENST00000420453 GSE1Q14687 1217 aa11.02□□□□□ -0.65
LINC00993-201ENST00000420453 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
LINC00993-201ENST00000420453 PYGBP11216 843 aa11□□□□□ -0.65
LINC00993-201ENST00000420453 IFNL1Q8IU54 200 aa11□□□□□ -0.65
LINC00993-201ENST00000420453 TTLL13PA6NNM8 815 aa10.99□□□□□ -0.65
LINC00993-201ENST00000420453 POTEB2H3BUK9 544 aa10.97□□□□□ -0.65
LINC00993-201ENST00000420453 SPOCK2Q92563 424 aa10.96□□□□□ -0.65
LINC00993-201ENST00000420453 IFNLR1Q8IU57 520 aaPredicted RBP10.94□□□□□ -0.66
LINC00993-201ENST00000420453 TMEM106CQ9BVX2 250 aa10.94□□□□□ -0.66
LINC00993-201ENST00000420453 SEC24BO95487 1268 aa10.93□□□□□ -0.66
LINC00993-201ENST00000420453 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
LINC00993-201ENST00000420453 TRIM35Q9UPQ4 493 aa10.93□□□□□ -0.66
LINC00993-201ENST00000420453 MAMSTRQ6ZN01 415 aa10.92□□□□□ -0.66
LINC00993-201ENST00000420453 IER5LQ5T953 404 aa10.9□□□□□ -0.66
LINC00993-201ENST00000420453 PCDHB8Q9UN66 801 aa10.89□□□□□ -0.67
LINC00993-201ENST00000420453 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
LINC00993-201ENST00000420453 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
LINC00993-201ENST00000420453 CHRM1P11229 460 aaPredicted RBP10.87□□□□□ -0.67
LINC00993-201ENST00000420453 SCUBE2Q9NQ36 999 aa10.87□□□□□ -0.67
LINC00993-201ENST00000420453 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
LINC00993-201ENST00000420453 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
LINC00993-201ENST00000420453 AMER1Q5JTC6 1135 aaPredicted RBP10.83□□□□□ -0.68
LINC00993-201ENST00000420453 COLQQ9Y215 455 aaPredicted RBP10.83□□□□□ -0.68
LINC00993-201ENST00000420453 PLCG2P16885 1265 aa10.81□□□□□ -0.68
LINC00993-201ENST00000420453 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
LINC00993-201ENST00000420453 PSEN1P49768 467 aa10.76□□□□□ -0.69
LINC00993-201ENST00000420453 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
LINC00993-201ENST00000420453 OCEL1Q9H607 264 aa10.75□□□□□ -0.69
LINC00993-201ENST00000420453 IRX5P78411 483 aaPredicted RBP10.74□□□□□ -0.69
LINC00993-201ENST00000420453 MKRN3Q13064 507 aaKnown RBP10.74□□□□□ -0.69
LINC00993-201ENST00000420453 PDAP1Q13442 181 aaKnown RBP10.74□□□□□ -0.69
LINC00993-201ENST00000420453 FAM163AQ96GL9 167 aaPredicted RBP10.65□□□□□ -0.7
LINC00993-201ENST00000420453 SLAIN1Q8ND83 568 aa10.64□□□□□ -0.71
LINC00993-201ENST00000420453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC00993-201ENST00000420453 CABP2Q9NPB3 220 aa10.63□□□□□ -0.71
LINC00993-201ENST00000420453 POTEMA6NI47 508 aa10.61□□□□□ -0.71
LINC00993-201ENST00000420453 L3MBTL3Q96JM7 780 aaPredicted RBP10.61□□□□□ -0.71
LINC00993-201ENST00000420453 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.61□□□□□ -0.71
LINC00993-201ENST00000420453 PDCD7Q8N8D1 485 aaKnown RBP10.6□□□□□ -0.71
LINC00993-201ENST00000420453 POTEGQ6S5H5 508 aa10.59□□□□□ -0.71
LINC00993-201ENST00000420453 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
LINC00993-201ENST00000420453 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
LINC00993-201ENST00000420453 PKD2Q13563 968 aa10.55□□□□□ -0.72
LINC00993-201ENST00000420453 G3V3G9 751 aa10.54□□□□□ -0.72
LINC00993-201ENST00000420453 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
LINC00993-201ENST00000420453 VGFO15240 615 aaPredicted RBP10.52□□□□□ -0.73
LINC00993-201ENST00000420453 SNPHO15079 494 aa10.51□□□□□ -0.73
LINC00993-201ENST00000420453 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
LINC00993-201ENST00000420453 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
LINC00993-201ENST00000420453 EFCAB3Q8N7B9 438 aa10.5□□□□□ -0.73
LINC00993-201ENST00000420453 RNF25Q96BH1 459 aaPredicted RBP10.49□□□□□ -0.73
LINC00993-201ENST00000420453 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
LINC00993-201ENST00000420453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.48□□□□□ -0.73
LINC00993-201ENST00000420453 DPY19L2Q6NUT2 758 aa10.48□□□□□ -0.73
LINC00993-201ENST00000420453 ZFP91Q96JP5 570 aaPredicted RBP10.48□□□□□ -0.73
LINC00993-201ENST00000420453 ECM2O94769 699 aaPredicted RBP10.47□□□□□ -0.73
LINC00993-201ENST00000420453 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
LINC00993-201ENST00000420453 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
LINC00993-201ENST00000420453 SOX12O15370 315 aa10.45□□□□□ -0.74
LINC00993-201ENST00000420453 ST18O60284 1047 aa10.44□□□□□ -0.74
LINC00993-201ENST00000420453 TMEM121BQ9BXQ6 578 aaPredicted RBP10.39□□□□□ -0.75
LINC00993-201ENST00000420453 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
LINC00993-201ENST00000420453 STK24Q9Y6E0 443 aa10.38□□□□□ -0.75
LINC00993-201ENST00000420453 STK25O00506 426 aa10.36□□□□□ -0.75
LINC00993-201ENST00000420453 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
LINC00993-201ENST00000420453 NLRP6P59044 892 aa10.35□□□□□ -0.75
LINC00993-201ENST00000420453 DCAF8L2P0C7V8 631 aa10.33□□□□□ -0.76
LINC00993-201ENST00000420453 CDAN1Q8IWY9 1227 aa10.33□□□□□ -0.76
LINC00993-201ENST00000420453 RGL2O15211 777 aa10.32□□□□□ -0.76
LINC00993-201ENST00000420453 MICALL2Q8IY33 904 aa10.32□□□□□ -0.76
LINC00993-201ENST00000420453 MS4A4AQ96JQ5 239 aa10.31□□□□□ -0.76
LINC00993-201ENST00000420453 MARVELD3Q96A59 401 aa10.29□□□□□ -0.76
LINC00993-201ENST00000420453 EMP3P54852 163 aa10.27□□□□□ -0.77
LINC00993-201ENST00000420453 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.77
LINC00993-201ENST00000420453 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
LINC00993-201ENST00000420453 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
LINC00993-201ENST00000420453 FBXO22Q8NEZ5 403 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms