RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
HMGB1P49-201ENST00000418882 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
HMGB1P49-201ENST00000418882 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
HMGB1P49-201ENST00000418882 GSE1Q14687 1217 aa12.91□□□□□ -0.34
HMGB1P49-201ENST00000418882 PHF12Q96QT6 1004 aa12.9□□□□□ -0.34
HMGB1P49-201ENST00000418882 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
HMGB1P49-201ENST00000418882 PYGBP11216 843 aa12.87□□□□□ -0.35
HMGB1P49-201ENST00000418882 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
HMGB1P49-201ENST00000418882 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
HMGB1P49-201ENST00000418882 RNF25Q96BH1 459 aaPredicted RBP12.81□□□□□ -0.36
HMGB1P49-201ENST00000418882 KIF12Q96FN5 646 aa12.81□□□□□ -0.36
HMGB1P49-201ENST00000418882 MAP3K13O43283 966 aa12.79□□□□□ -0.36
HMGB1P49-201ENST00000418882 RGL2O15211 777 aa12.78□□□□□ -0.36
HMGB1P49-201ENST00000418882 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
HMGB1P49-201ENST00000418882 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
HMGB1P49-201ENST00000418882 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
HMGB1P49-201ENST00000418882 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
HMGB1P49-201ENST00000418882 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
HMGB1P49-201ENST00000418882 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
HMGB1P49-201ENST00000418882 PCDHB13Q9Y5F0 798 aa12.71□□□□□ -0.37
HMGB1P49-201ENST00000418882 SP7Q8TDD2 431 aaPredicted RBP12.7□□□□□ -0.38
HMGB1P49-201ENST00000418882 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
HMGB1P49-201ENST00000418882 GABBR2O75899 941 aa12.69□□□□□ -0.38
HMGB1P49-201ENST00000418882 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
HMGB1P49-201ENST00000418882 RIOK3O14730 519 aaKnown RBP12.64□□□□□ -0.39
HMGB1P49-201ENST00000418882 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
HMGB1P49-201ENST00000418882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.55□□□□□ -0.4
HMGB1P49-201ENST00000418882 CLCN6P51797 869 aa12.55□□□□□ -0.4
HMGB1P49-201ENST00000418882 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
HMGB1P49-201ENST00000418882 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
HMGB1P49-201ENST00000418882 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
HMGB1P49-201ENST00000418882 PSEN1P49768 467 aa12.54□□□□□ -0.4
HMGB1P49-201ENST00000418882 PDAP1Q13442 181 aaKnown RBP12.53□□□□□ -0.4
HMGB1P49-201ENST00000418882 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
HMGB1P49-201ENST00000418882 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
HMGB1P49-201ENST00000418882 TTLL13PA6NNM8 815 aa12.49□□□□□ -0.41
HMGB1P49-201ENST00000418882 TIE1P35590 1138 aa12.48□□□□□ -0.41
HMGB1P49-201ENST00000418882 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
HMGB1P49-201ENST00000418882 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
HMGB1P49-201ENST00000418882 CHGAP10645 457 aaKnown RBP12.46□□□□□ -0.41
HMGB1P49-201ENST00000418882 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.41
HMGB1P49-201ENST00000418882 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.41
HMGB1P49-201ENST00000418882 STK25O00506 426 aa12.45□□□□□ -0.42
HMGB1P49-201ENST00000418882 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
HMGB1P49-201ENST00000418882 PELP1Q8IZL8 1130 aaKnown RBP12.44□□□□□ -0.42
HMGB1P49-201ENST00000418882 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
HMGB1P49-201ENST00000418882 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
HMGB1P49-201ENST00000418882 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
HMGB1P49-201ENST00000418882 TAOK2Q9UL54 1235 aa12.4□□□□□ -0.42
HMGB1P49-201ENST00000418882 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
HMGB1P49-201ENST00000418882 TRIM35Q9UPQ4 493 aa12.39□□□□□ -0.43
HMGB1P49-201ENST00000418882 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
HMGB1P49-201ENST00000418882 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
HMGB1P49-201ENST00000418882 DNAJC5Q9H3Z4 198 aa12.32□□□□□ -0.44
HMGB1P49-201ENST00000418882 POTEFA5A3E0 1075 aa12.27□□□□□ -0.45
HMGB1P49-201ENST00000418882 MFRPQ9BY79 579 aa12.27□□□□□ -0.45
HMGB1P49-201ENST00000418882 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
HMGB1P49-201ENST00000418882 BBXQ8WY36 941 aaPredicted RBP12.25□□□□□ -0.45
HMGB1P49-201ENST00000418882 PHF8Q9UPP1 1060 aa12.25□□□□□ -0.45
HMGB1P49-201ENST00000418882 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
HMGB1P49-201ENST00000418882 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
HMGB1P49-201ENST00000418882 MKRN3Q13064 507 aaKnown RBP12.23□□□□□ -0.45
HMGB1P49-201ENST00000418882 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
HMGB1P49-201ENST00000418882 FBXO22Q8NEZ5 403 aa12.23□□□□□ -0.45
HMGB1P49-201ENST00000418882 MS4A4AQ96JQ5 239 aa12.23□□□□□ -0.45
HMGB1P49-201ENST00000418882 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
HMGB1P49-201ENST00000418882 IER5LQ5T953 404 aa12.22□□□□□ -0.45
HMGB1P49-201ENST00000418882 PDCD7Q8N8D1 485 aaKnown RBP12.21□□□□□ -0.45
HMGB1P49-201ENST00000418882 SLC39A7Q92504 469 aa12.21□□□□□ -0.45
HMGB1P49-201ENST00000418882 SOX12O15370 315 aa12.2□□□□□ -0.46
HMGB1P49-201ENST00000418882 GTPBP6O43824 516 aaPredicted RBP12.19□□□□□ -0.46
HMGB1P49-201ENST00000418882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
HMGB1P49-201ENST00000418882 C7P10643 843 aa12.18□□□□□ -0.46
HMGB1P49-201ENST00000418882 DPY19L2Q6NUT2 758 aa12.18□□□□□ -0.46
HMGB1P49-201ENST00000418882 PPP1R37O75864 691 aa12.14□□□□□ -0.47
HMGB1P49-201ENST00000418882 NLRP6P59044 892 aa12.14□□□□□ -0.47
HMGB1P49-201ENST00000418882 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
HMGB1P49-201ENST00000418882 POTEB2H3BUK9 544 aa12.13□□□□□ -0.47
HMGB1P49-201ENST00000418882 PAXIP1Q6ZW49 1069 aaPredicted RBP12.12□□□□□ -0.47
HMGB1P49-201ENST00000418882 SEC24BO95487 1268 aa12.11□□□□□ -0.47
HMGB1P49-201ENST00000418882 PLCG2P16885 1265 aa12.11□□□□□ -0.47
HMGB1P49-201ENST00000418882 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
HMGB1P49-201ENST00000418882 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
HMGB1P49-201ENST00000418882 POTEJP0CG39 1038 aa12.09□□□□□ -0.47
HMGB1P49-201ENST00000418882 SPRYD3Q8NCJ5 442 aa12.07□□□□□ -0.48
HMGB1P49-201ENST00000418882 PLCB2Q00722 1185 aa12.06□□□□□ -0.48
HMGB1P49-201ENST00000418882 MICALL2Q8IY33 904 aa12□□□□□ -0.49
HMGB1P49-201ENST00000418882 RYDENQ9NUL5 291 aaKnown RBP11.99□□□□□ -0.49
HMGB1P49-201ENST00000418882 TMEM121BQ9BXQ6 578 aaPredicted RBP11.98□□□□□ -0.49
HMGB1P49-201ENST00000418882 BOLA1Q9Y3E2 137 aa11.98□□□□□ -0.49
HMGB1P49-201ENST00000418882 CADPS2Q86UW7 1296 aa11.96□□□□□ -0.49
HMGB1P49-201ENST00000418882 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
HMGB1P49-201ENST00000418882 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
HMGB1P49-201ENST00000418882 LHX8Q68G74 356 aa11.92□□□□□ -0.5
HMGB1P49-201ENST00000418882 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
HMGB1P49-201ENST00000418882 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
HMGB1P49-201ENST00000418882 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
HMGB1P49-201ENST00000418882 G3V3G9 751 aa11.85□□□□□ -0.51
HMGB1P49-201ENST00000418882 NCKAP5LQ9HCH0 1330 aa11.85□□□□□ -0.51
HMGB1P49-201ENST00000418882 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms