RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
RFC4-204ENST00000417876 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
RFC4-204ENST00000417876 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
RFC4-204ENST00000417876 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
RFC4-204ENST00000417876 VSIG10Q8N0Z9 540 aa12.12□□□□□ -0.47
RFC4-204ENST00000417876 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
RFC4-204ENST00000417876 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
RFC4-204ENST00000417876 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
RFC4-204ENST00000417876 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
RFC4-204ENST00000417876 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
RFC4-204ENST00000417876 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
RFC4-204ENST00000417876 SPRYD3Q8NCJ5 442 aa12.09□□□□□ -0.47
RFC4-204ENST00000417876 RIOK3O14730 519 aaKnown RBP12.07□□□□□ -0.48
RFC4-204ENST00000417876 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
RFC4-204ENST00000417876 TSHZ2Q9NRE2 1034 aa12.05□□□□□ -0.48
RFC4-204ENST00000417876 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
RFC4-204ENST00000417876 PYGBP11216 843 aa12.02□□□□□ -0.49
RFC4-204ENST00000417876 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
RFC4-204ENST00000417876 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
RFC4-204ENST00000417876 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
RFC4-204ENST00000417876 FXR2P51116 673 aaKnown RBP eCLIP11.95□□□□□ -0.5
RFC4-204ENST00000417876 HAX1O00165 279 aa11.94□□□□□ -0.5
RFC4-204ENST00000417876 STK25O00506 426 aa11.94□□□□□ -0.5
RFC4-204ENST00000417876 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
RFC4-204ENST00000417876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.93□□□□□ -0.5
RFC4-204ENST00000417876 ZFP91Q96JP5 570 aaPredicted RBP11.93□□□□□ -0.5
RFC4-204ENST00000417876 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
RFC4-204ENST00000417876 TAOK2Q9UL54 1235 aa11.93□□□□□ -0.5
RFC4-204ENST00000417876 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
RFC4-204ENST00000417876 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
RFC4-204ENST00000417876 EVX2Q03828 476 aa11.9□□□□□ -0.5
RFC4-204ENST00000417876 BCANQ96GW7 911 aa11.89□□□□□ -0.51
RFC4-204ENST00000417876 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
RFC4-204ENST00000417876 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
RFC4-204ENST00000417876 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
RFC4-204ENST00000417876 PCDHB8Q9UN66 801 aa11.81□□□□□ -0.52
RFC4-204ENST00000417876 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
RFC4-204ENST00000417876 ZNF467Q7Z7K2 595 aaPredicted RBP11.77□□□□□ -0.53
RFC4-204ENST00000417876 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
RFC4-204ENST00000417876 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
RFC4-204ENST00000417876 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
RFC4-204ENST00000417876 PSEN1P49768 467 aa11.7□□□□□ -0.54
RFC4-204ENST00000417876 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
RFC4-204ENST00000417876 MAP3K13O43283 966 aa11.69□□□□□ -0.54
RFC4-204ENST00000417876 KIF12Q96FN5 646 aa11.69□□□□□ -0.54
RFC4-204ENST00000417876 PAK3O75914 559 aaPredicted RBP11.65□□□□□ -0.54
RFC4-204ENST00000417876 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
RFC4-204ENST00000417876 MFRPQ9BY79 579 aa11.64□□□□□ -0.55
RFC4-204ENST00000417876 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
RFC4-204ENST00000417876 CADPS2Q86UW7 1296 aa11.61□□□□□ -0.55
RFC4-204ENST00000417876 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
RFC4-204ENST00000417876 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
RFC4-204ENST00000417876 C19orf67A6NJJ6 358 aa11.58□□□□□ -0.56
RFC4-204ENST00000417876 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
RFC4-204ENST00000417876 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
RFC4-204ENST00000417876 PPP1R37O75864 691 aa11.56□□□□□ -0.56
RFC4-204ENST00000417876 CABP2Q9NPB3 220 aa11.55□□□□□ -0.56
RFC4-204ENST00000417876 FBXO22Q8NEZ5 403 aa11.54□□□□□ -0.56
RFC4-204ENST00000417876 NBR1Q14596 966 aa11.53□□□□□ -0.56
RFC4-204ENST00000417876 GABBR2O75899 941 aa11.52□□□□□ -0.57
RFC4-204ENST00000417876 PHF8Q9UPP1 1060 aa11.52□□□□□ -0.57
RFC4-204ENST00000417876 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
RFC4-204ENST00000417876 SOX12O15370 315 aa11.48□□□□□ -0.57
RFC4-204ENST00000417876 NLRP6P59044 892 aa11.47□□□□□ -0.57
RFC4-204ENST00000417876 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
RFC4-204ENST00000417876 MS4A4AQ96JQ5 239 aa11.44□□□□□ -0.58
RFC4-204ENST00000417876 KCNV2Q8TDN2 545 aa11.42□□□□□ -0.58
RFC4-204ENST00000417876 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
RFC4-204ENST00000417876 WDR70Q9NW82 654 aa11.39□□□□□ -0.59
RFC4-204ENST00000417876 LHX8Q68G74 356 aa11.37□□□□□ -0.59
RFC4-204ENST00000417876 P3H3Q8IVL6 736 aa11.36□□□□□ -0.59
RFC4-204ENST00000417876 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
RFC4-204ENST00000417876 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
RFC4-204ENST00000417876 TTLL13PA6NNM8 815 aa11.33□□□□□ -0.6
RFC4-204ENST00000417876 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
RFC4-204ENST00000417876 TIE1P35590 1138 aa11.31□□□□□ -0.6
RFC4-204ENST00000417876 GOLGA2Q08379 1002 aa11.31□□□□□ -0.6
RFC4-204ENST00000417876 BMP2KQ9NSY1 1161 aaPredicted RBP11.31□□□□□ -0.6
RFC4-204ENST00000417876 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
RFC4-204ENST00000417876 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
RFC4-204ENST00000417876 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
RFC4-204ENST00000417876 E2F4Q16254 413 aa11.26□□□□□ -0.61
RFC4-204ENST00000417876 CRISPLD2Q9H0B8 497 aa11.26□□□□□ -0.61
RFC4-204ENST00000417876 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
RFC4-204ENST00000417876 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
RFC4-204ENST00000417876 PDE4AP27815 886 aa11.23□□□□□ -0.61
RFC4-204ENST00000417876 MFSD10Q14728 455 aa11.23□□□□□ -0.61
RFC4-204ENST00000417876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
RFC4-204ENST00000417876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.616e-6■■■■□ 21
RFC4-204ENST00000417876 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
RFC4-204ENST00000417876 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
RFC4-204ENST00000417876 SEMA3EO15041 775 aa11.18□□□□□ -0.62
RFC4-204ENST00000417876 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
RFC4-204ENST00000417876 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
RFC4-204ENST00000417876 PDCD7Q8N8D1 485 aaKnown RBP11.16□□□□□ -0.62
RFC4-204ENST00000417876 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
RFC4-204ENST00000417876 CAMK2BQ13554 666 aa11.14□□□□□ -0.63
RFC4-204ENST00000417876 TESPA1A2RU30 521 aaPredicted RBP11.13□□□□□ -0.63
RFC4-204ENST00000417876 ASTLQ6HA08 431 aaPredicted RBP11.12□□□□□ -0.63
RFC4-204ENST00000417876 GPHNQ9NQX3 736 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms