RNA–Protein interactions for RNA: ENST00000417503.1

SSXP9-201, Transcript of SSX family pseudogene 9, humanhuman

BASIC

Gene SSXP9, Length 292 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP9-201ENST00000417503 FAM212AQ96EL1 285 aa7.32□□□□□ -1.24
SSXP9-201ENST00000417503 RIOK3O14730 519 aaKnown RBP7.31□□□□□ -1.24
SSXP9-201ENST00000417503 POTEDQ86YR6 584 aa7.31□□□□□ -1.24
SSXP9-201ENST00000417503 RBM42Q9BTD8 480 aaKnown RBP7.31□□□□□ -1.24
SSXP9-201ENST00000417503 DCAF8Q5TAQ9 597 aa7.29□□□□□ -1.24
SSXP9-201ENST00000417503 VGFO15240 615 aaPredicted RBP7.27□□□□□ -1.25
SSXP9-201ENST00000417503 STK25O00506 426 aa7.25□□□□□ -1.25
SSXP9-201ENST00000417503 PRR29P0C7W0 189 aa7.24□□□□□ -1.25
SSXP9-201ENST00000417503 NUBP1P53384 320 aa7.24□□□□□ -1.25
SSXP9-201ENST00000417503 CACNB1Q02641 598 aaPredicted RBP7.24□□□□□ -1.25
SSXP9-201ENST00000417503 AKT1S1Q96B36 256 aa7.24□□□□□ -1.25
SSXP9-201ENST00000417503 RNF25Q96BH1 459 aaPredicted RBP7.22□□□□□ -1.25
SSXP9-201ENST00000417503 CHRM1P11229 460 aaPredicted RBP7.21□□□□□ -1.26
SSXP9-201ENST00000417503 P3H3Q8IVL6 736 aa7.2□□□□□ -1.26
SSXP9-201ENST00000417503 CLEC11AQ9Y240 323 aa7.2□□□□□ -1.26
SSXP9-201ENST00000417503 SGIP1Q9BQI5 828 aa7.19□□□□□ -1.26
SSXP9-201ENST00000417503 GTPBP6O43824 516 aaPredicted RBP7.17□□□□□ -1.26
SSXP9-201ENST00000417503 STK24Q9Y6E0 443 aa7.17□□□□□ -1.26
SSXP9-201ENST00000417503 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
SSXP9-201ENST00000417503 BCL11BQ9C0K0 894 aaPredicted RBP7.16□□□□□ -1.26
SSXP9-201ENST00000417503 NKX1-1Q15270 411 aaPredicted RBP7.15□□□□□ -1.26
SSXP9-201ENST00000417503 CREBZFQ9NS37 354 aa7.14□□□□□ -1.27
SSXP9-201ENST00000417503 TULP1O00294 542 aaPredicted RBP7.13□□□□□ -1.27
SSXP9-201ENST00000417503 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.12□□□□□ -1.27
SSXP9-201ENST00000417503 ZNF467Q7Z7K2 595 aaPredicted RBP7.12□□□□□ -1.27
SSXP9-201ENST00000417503 ZFP91Q96JP5 570 aaPredicted RBP7.12□□□□□ -1.27
SSXP9-201ENST00000417503 WDR70Q9NW82 654 aa7.12□□□□□ -1.27
SSXP9-201ENST00000417503 REM2Q8IYK8 340 aaPredicted RBP7.1□□□□□ -1.27
SSXP9-201ENST00000417503 RASEFQ8IZ41 740 aa7.1□□□□□ -1.27
SSXP9-201ENST00000417503 MNX1P50219 401 aaPredicted RBP7.09□□□□□ -1.27
SSXP9-201ENST00000417503 PYGBP11216 843 aa7.08□□□□□ -1.28
SSXP9-201ENST00000417503 PDAP1Q13442 181 aaKnown RBP7.05□□□□□ -1.28
SSXP9-201ENST00000417503 PITPNM1O00562 1244 aa7□□□□□ -1.29
SSXP9-201ENST00000417503 PAK3O75914 559 aaPredicted RBP7□□□□□ -1.29
SSXP9-201ENST00000417503 TMEM132AQ24JP5 1023 aa7□□□□□ -1.29
SSXP9-201ENST00000417503 TSPYL2Q9H2G4 693 aaPredicted RBP6.99□□□□□ -1.29
SSXP9-201ENST00000417503 GTF3C3Q9Y5Q9 886 aa6.98□□□□□ -1.29
SSXP9-201ENST00000417503 ZNF579Q8NAF0 562 aaKnown RBP6.97□□□□□ -1.29
SSXP9-201ENST00000417503 LMOD2Q6P5Q4 547 aa6.96□□□□□ -1.3
SSXP9-201ENST00000417503 PSEN1P49768 467 aa6.95□□□□□ -1.3
SSXP9-201ENST00000417503 KCNV2Q8TDN2 545 aa6.95□□□□□ -1.3
SSXP9-201ENST00000417503 ARHGEF1Q92888 912 aaKnown RBP6.95□□□□□ -1.3
SSXP9-201ENST00000417503 FARP1Q9Y4F1 1045 aaPredicted RBP6.95□□□□□ -1.3
SSXP9-201ENST00000417503 NLRP6P59044 892 aa6.94□□□□□ -1.3
SSXP9-201ENST00000417503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.92□□□□□ -1.3
SSXP9-201ENST00000417503 SOX12O15370 315 aa6.91□□□□□ -1.3
SSXP9-201ENST00000417503 E2F4Q16254 413 aa6.91□□□□□ -1.3
SSXP9-201ENST00000417503 SMYD5Q6GMV2 418 aa6.91□□□□□ -1.3
SSXP9-201ENST00000417503 MFRPQ9BY79 579 aa6.9□□□□□ -1.3
SSXP9-201ENST00000417503 PCDHB8Q9UN66 801 aa6.9□□□□□ -1.3
SSXP9-201ENST00000417503 PCDHB13Q9Y5F0 798 aa6.9□□□□□ -1.3
SSXP9-201ENST00000417503 DAXXQ9UER7 740 aaPredicted RBP6.89□□□□□ -1.31
SSXP9-201ENST00000417503 TIMELESSQ9UNS1 1208 aa6.89□□□□□ -1.31
SSXP9-201ENST00000417503 CCDC61Q9Y6R9 512 aa6.89□□□□□ -1.31
SSXP9-201ENST00000417503 CHADLQ6NUI6 762 aa6.88□□□□□ -1.31
SSXP9-201ENST00000417503 CADPS2Q86UW7 1296 aa6.88□□□□□ -1.31
SSXP9-201ENST00000417503 PRKAR2AP13861 404 aaKnown RBP6.86□□□□□ -1.31
SSXP9-201ENST00000417503 GOLGA2Q08379 1002 aa6.86□□□□□ -1.31
SSXP9-201ENST00000417503 C14orf37Q86TY3 774 aa6.85□□□□□ -1.31
SSXP9-201ENST00000417503 ARXQ96QS3 562 aa6.85□□□□□ -1.31
SSXP9-201ENST00000417503 CABP2Q9NPB3 220 aa6.85□□□□□ -1.31
SSXP9-201ENST00000417503 PDE4AP27815 886 aa6.84□□□□□ -1.31
SSXP9-201ENST00000417503 EFCAB3Q8N7B9 438 aa6.83□□□□□ -1.32
SSXP9-201ENST00000417503 TESPA1A2RU30 521 aaPredicted RBP6.82□□□□□ -1.32
SSXP9-201ENST00000417503 IFNL1Q8IU54 200 aa6.82□□□□□ -1.32
SSXP9-201ENST00000417503 FBXO22Q8NEZ5 403 aa6.82□□□□□ -1.32
SSXP9-201ENST00000417503 NEUROD2Q15784 382 aa6.81□□□□□ -1.32
SSXP9-201ENST00000417503 ZC3H15Q8WU90 426 aaKnown RBP6.81□□□□□ -1.32
SSXP9-201ENST00000417503 DDX27Q96GQ7 796 aaKnown RBP6.8□□□□□ -1.32
SSXP9-201ENST00000417503 PHF8Q9UPP1 1060 aa6.8□□□□□ -1.32
SSXP9-201ENST00000417503 MAP3K13O43283 966 aa6.79□□□□□ -1.32
SSXP9-201ENST00000417503 BRPF1P55201 1214 aaPredicted RBP6.79□□□□□ -1.32
SSXP9-201ENST00000417503 KIF12Q96FN5 646 aa6.79□□□□□ -1.32
SSXP9-201ENST00000417503 LARP6Q9BRS8 491 aaKnown RBP6.79□□□□□ -1.32
SSXP9-201ENST00000417503 SEMA3EO15041 775 aa6.78□□□□□ -1.32
SSXP9-201ENST00000417503 FXR2P51116 673 aaKnown RBP eCLIP6.78□□□□□ -1.32
SSXP9-201ENST00000417503 ARIH1Q9Y4X5 557 aaPredicted RBP6.78□□□□□ -1.32
SSXP9-201ENST00000417503 PPP1R37O75864 691 aa6.77□□□□□ -1.33
SSXP9-201ENST00000417503 MFSD10Q14728 455 aa6.77□□□□□ -1.33
SSXP9-201ENST00000417503 MKRN3Q13064 507 aaKnown RBP6.76□□□□□ -1.33
SSXP9-201ENST00000417503 CRISPLD2Q9H0B8 497 aa6.74□□□□□ -1.33
SSXP9-201ENST00000417503 ZRANB1Q9UGI0 708 aa6.74□□□□□ -1.33
SSXP9-201ENST00000417503 NCKAP5LQ9HCH0 1330 aa6.74□□□□□ -1.33
SSXP9-201ENST00000417503 ZMYND10O75800 440 aa6.73□□□□□ -1.33
SSXP9-201ENST00000417503 SLC24A3Q9HC58 644 aa6.73□□□□□ -1.33
SSXP9-201ENST00000417503 CD44P16070 742 aaKnown RBP6.72□□□□□ -1.33
SSXP9-201ENST00000417503 GPIHBP1Q8IV16 184 aa6.72□□□□□ -1.33
SSXP9-201ENST00000417503 HOMEZQ8IX15 550 aa6.72□□□□□ -1.33
SSXP9-201ENST00000417503 TMEM106CQ9BVX2 250 aa6.72□□□□□ -1.33
SSXP9-201ENST00000417503 CAMK2BQ13554 666 aa6.71□□□□□ -1.34
SSXP9-201ENST00000417503 CHRDL2Q6WN34 429 aa6.7□□□□□ -1.34
SSXP9-201ENST00000417503 AK7Q96M32 723 aa6.7□□□□□ -1.34
SSXP9-201ENST00000417503 SPDYE16A6NNV3 312 aaPredicted RBP6.69□□□□□ -1.34
SSXP9-201ENST00000417503 BARGINQ6ZT62 677 aa6.69□□□□□ -1.34
SSXP9-201ENST00000417503 KRI1Q8N9T8 703 aaKnown RBP6.69□□□□□ -1.34
SSXP9-201ENST00000417503 PPP1R15BQ5SWA1 713 aa6.68□□□□□ -1.34
SSXP9-201ENST00000417503 MS4A4AQ96JQ5 239 aa6.68□□□□□ -1.34
SSXP9-201ENST00000417503 PIP4P2Q8N4L2 257 aa6.67□□□□□ -1.34
SSXP9-201ENST00000417503 GPHNQ9NQX3 736 aaPredicted RBP6.66□□□□□ -1.34
SSXP9-201ENST00000417503 TIE1P35590 1138 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms