RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
ATG4AP1-201ENST00000416893 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
ATG4AP1-201ENST00000416893 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
ATG4AP1-201ENST00000416893 ASTLQ6HA08 431 aaPredicted RBP12.23□□□□□ -0.45
ATG4AP1-201ENST00000416893 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
ATG4AP1-201ENST00000416893 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
ATG4AP1-201ENST00000416893 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.45
ATG4AP1-201ENST00000416893 NUBP1P53384 320 aa12.21□□□□□ -0.45
ATG4AP1-201ENST00000416893 MAP3K13O43283 966 aa12.19□□□□□ -0.46
ATG4AP1-201ENST00000416893 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
ATG4AP1-201ENST00000416893 POTEB2H3BUK9 544 aa12.13□□□□□ -0.47
ATG4AP1-201ENST00000416893 SLC39A7Q92504 469 aa12.13□□□□□ -0.47
ATG4AP1-201ENST00000416893 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
ATG4AP1-201ENST00000416893 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
ATG4AP1-201ENST00000416893 ATN1P54259 1190 aaPredicted RBP12.12□□□□□ -0.47
ATG4AP1-201ENST00000416893 BMP2KQ9NSY1 1161 aaPredicted RBP12.12□□□□□ -0.47
ATG4AP1-201ENST00000416893 C7P10643 843 aa12.11□□□□□ -0.47
ATG4AP1-201ENST00000416893 TIE1P35590 1138 aa12.1□□□□□ -0.47
ATG4AP1-201ENST00000416893 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
ATG4AP1-201ENST00000416893 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
ATG4AP1-201ENST00000416893 PCDHB13Q9Y5F0 798 aa12.08□□□□□ -0.48
ATG4AP1-201ENST00000416893 VASPP50552 380 aaPredicted RBP12.07□□□□□ -0.48
ATG4AP1-201ENST00000416893 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
ATG4AP1-201ENST00000416893 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
ATG4AP1-201ENST00000416893 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
ATG4AP1-201ENST00000416893 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
ATG4AP1-201ENST00000416893 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
ATG4AP1-201ENST00000416893 POTEFA5A3E0 1075 aa11.96□□□□□ -0.49
ATG4AP1-201ENST00000416893 PYGBP11216 843 aa11.96□□□□□ -0.49
ATG4AP1-201ENST00000416893 TRIM35Q9UPQ4 493 aa11.95□□□□□ -0.5
ATG4AP1-201ENST00000416893 MAMSTRQ6ZN01 415 aa11.93□□□□□ -0.5
ATG4AP1-201ENST00000416893 GSE1Q14687 1217 aa11.92□□□□□ -0.5
ATG4AP1-201ENST00000416893 TMEM106CQ9BVX2 250 aa11.92□□□□□ -0.5
ATG4AP1-201ENST00000416893 IER5LQ5T953 404 aa11.91□□□□□ -0.5
ATG4AP1-201ENST00000416893 SEC24BO95487 1268 aa11.9□□□□□ -0.5
ATG4AP1-201ENST00000416893 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
ATG4AP1-201ENST00000416893 SCUBE2Q9NQ36 999 aa11.87□□□□□ -0.51
ATG4AP1-201ENST00000416893 PCDHB8Q9UN66 801 aa11.87□□□□□ -0.51
ATG4AP1-201ENST00000416893 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
ATG4AP1-201ENST00000416893 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
ATG4AP1-201ENST00000416893 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
ATG4AP1-201ENST00000416893 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
ATG4AP1-201ENST00000416893 PLCG2P16885 1265 aa11.78□□□□□ -0.52
ATG4AP1-201ENST00000416893 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
ATG4AP1-201ENST00000416893 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
ATG4AP1-201ENST00000416893 POTEMA6NI47 508 aa11.72□□□□□ -0.53
ATG4AP1-201ENST00000416893 OCEL1Q9H607 264 aa11.72□□□□□ -0.53
ATG4AP1-201ENST00000416893 POTEGQ6S5H5 508 aa11.7□□□□□ -0.54
ATG4AP1-201ENST00000416893 PSEN1P49768 467 aa11.69□□□□□ -0.54
ATG4AP1-201ENST00000416893 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
ATG4AP1-201ENST00000416893 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
ATG4AP1-201ENST00000416893 MKRN3Q13064 507 aaKnown RBP11.65□□□□□ -0.54
ATG4AP1-201ENST00000416893 PDAP1Q13442 181 aaKnown RBP11.65□□□□□ -0.54
ATG4AP1-201ENST00000416893 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
ATG4AP1-201ENST00000416893 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
ATG4AP1-201ENST00000416893 PDCD7Q8N8D1 485 aaKnown RBP11.61□□□□□ -0.55
ATG4AP1-201ENST00000416893 TRIM41Q8WV44 630 aa11.6□□□□□ -0.55
ATG4AP1-201ENST00000416893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.58□□□□□ -0.56
ATG4AP1-201ENST00000416893 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
ATG4AP1-201ENST00000416893 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.56□□□□□ -0.56
ATG4AP1-201ENST00000416893 CABP2Q9NPB3 220 aa11.55□□□□□ -0.56
ATG4AP1-201ENST00000416893 L3MBTL3Q96JM7 780 aaPredicted RBP11.53□□□□□ -0.56
ATG4AP1-201ENST00000416893 PCDH10Q9P2E7 1040 aa11.53□□□□□ -0.56
ATG4AP1-201ENST00000416893 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
ATG4AP1-201ENST00000416893 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
ATG4AP1-201ENST00000416893 ST18O60284 1047 aa11.47□□□□□ -0.57
ATG4AP1-201ENST00000416893 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
ATG4AP1-201ENST00000416893 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
ATG4AP1-201ENST00000416893 SNPHO15079 494 aa11.44□□□□□ -0.58
ATG4AP1-201ENST00000416893 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
ATG4AP1-201ENST00000416893 NISCHQ9Y2I1 1504 aa11.44□□□□□ -0.58
ATG4AP1-201ENST00000416893 EFCAB3Q8N7B9 438 aa11.42□□□□□ -0.58
ATG4AP1-201ENST00000416893 G3V3G9 751 aa11.4□□□□□ -0.58
ATG4AP1-201ENST00000416893 BOLA1Q9Y3E2 137 aa11.4□□□□□ -0.58
ATG4AP1-201ENST00000416893 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
ATG4AP1-201ENST00000416893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.38□□□□□ -0.59
ATG4AP1-201ENST00000416893 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
ATG4AP1-201ENST00000416893 TMEM121BQ9BXQ6 578 aaPredicted RBP11.37□□□□□ -0.59
ATG4AP1-201ENST00000416893 CDAN1Q8IWY9 1227 aa11.36□□□□□ -0.59
ATG4AP1-201ENST00000416893 SOX12O15370 315 aa11.32□□□□□ -0.6
ATG4AP1-201ENST00000416893 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
ATG4AP1-201ENST00000416893 TAOK2Q9UL54 1235 aa11.29□□□□□ -0.6
ATG4AP1-201ENST00000416893 ECM2O94769 699 aaPredicted RBP11.27□□□□□ -0.61
ATG4AP1-201ENST00000416893 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
ATG4AP1-201ENST00000416893 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
ATG4AP1-201ENST00000416893 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
ATG4AP1-201ENST00000416893 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
ATG4AP1-201ENST00000416893 EMP3P54852 163 aa11.23□□□□□ -0.61
ATG4AP1-201ENST00000416893 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
ATG4AP1-201ENST00000416893 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
ATG4AP1-201ENST00000416893 PKD2Q13563 968 aa11.22□□□□□ -0.61
ATG4AP1-201ENST00000416893 NLRP6P59044 892 aa11.2□□□□□ -0.62
ATG4AP1-201ENST00000416893 STK25O00506 426 aa11.19□□□□□ -0.62
ATG4AP1-201ENST00000416893 TMEM92Q6UXU6 159 aa11.18□□□□□ -0.62
ATG4AP1-201ENST00000416893 RGL2O15211 777 aa11.17□□□□□ -0.62
ATG4AP1-201ENST00000416893 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
ATG4AP1-201ENST00000416893 ZNF710Q8N1W2 664 aa11.17□□□□□ -0.62
ATG4AP1-201ENST00000416893 FBXO22Q8NEZ5 403 aa11.17□□□□□ -0.62
ATG4AP1-201ENST00000416893 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
ATG4AP1-201ENST00000416893 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms