RNA–Protein interactions for RNA: ENST00000416796.5

LRRK2-203, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 3

Gene LRRK2, Length 1,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-203ENST00000416796 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
LRRK2-203ENST00000416796 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
LRRK2-203ENST00000416796 KDM2AQ9Y2K7 1162 aa11.9□□□□□ -0.5
LRRK2-203ENST00000416796 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
LRRK2-203ENST00000416796 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
LRRK2-203ENST00000416796 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
LRRK2-203ENST00000416796 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
LRRK2-203ENST00000416796 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
LRRK2-203ENST00000416796 STK25O00506 426 aa11.8□□□□□ -0.52
LRRK2-203ENST00000416796 MNX1P50219 401 aaPredicted RBP11.78□□□□□ -0.52
LRRK2-203ENST00000416796 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
LRRK2-203ENST00000416796 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
LRRK2-203ENST00000416796 VGFO15240 615 aaPredicted RBP11.77□□□□□ -0.53
LRRK2-203ENST00000416796 PYGBP11216 843 aa11.73□□□□□ -0.53
LRRK2-203ENST00000416796 PRKCSHP14314 528 aaPredicted RBP11.73□□□□□ -0.53
LRRK2-203ENST00000416796 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.54
LRRK2-203ENST00000416796 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
LRRK2-203ENST00000416796 STK24Q9Y6E0 443 aa11.7□□□□□ -0.54
LRRK2-203ENST00000416796 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
LRRK2-203ENST00000416796 BCL11BQ9C0K0 894 aaPredicted RBP11.68□□□□□ -0.54
LRRK2-203ENST00000416796 NBR1Q14596 966 aa11.67□□□□□ -0.54
LRRK2-203ENST00000416796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.66□□□□□ -0.54
LRRK2-203ENST00000416796 TPRNQ4KMQ1 711 aa11.66□□□□□ -0.54
LRRK2-203ENST00000416796 ZFP91Q96JP5 570 aaPredicted RBP11.66□□□□□ -0.54
LRRK2-203ENST00000416796 CHADLQ6NUI6 762 aa11.65□□□□□ -0.55
LRRK2-203ENST00000416796 GTPBP6O43824 516 aaPredicted RBP11.64□□□□□ -0.55
LRRK2-203ENST00000416796 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
LRRK2-203ENST00000416796 RYDENQ9NUL5 291 aaKnown RBP11.63□□□□□ -0.55
LRRK2-203ENST00000416796 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
LRRK2-203ENST00000416796 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
LRRK2-203ENST00000416796 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
LRRK2-203ENST00000416796 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
LRRK2-203ENST00000416796 PAK3O75914 559 aaPredicted RBP11.49□□□□□ -0.57
LRRK2-203ENST00000416796 PDAP1Q13442 181 aaKnown RBP11.49□□□□□ -0.57
LRRK2-203ENST00000416796 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
LRRK2-203ENST00000416796 PCDHB13Q9Y5F0 798 aa11.48□□□□□ -0.57
LRRK2-203ENST00000416796 PSEN1P49768 467 aa11.42□□□□□ -0.58
LRRK2-203ENST00000416796 CCDC61Q9Y6R9 512 aa11.42□□□□□ -0.58
LRRK2-203ENST00000416796 WDR70Q9NW82 654 aa11.41□□□□□ -0.58
LRRK2-203ENST00000416796 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.59
LRRK2-203ENST00000416796 P3H3Q8IVL6 736 aa11.38□□□□□ -0.59
LRRK2-203ENST00000416796 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
LRRK2-203ENST00000416796 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
LRRK2-203ENST00000416796 IFNL1Q8IU54 200 aa11.33□□□□□ -0.6
LRRK2-203ENST00000416796 MAP3K13O43283 966 aa11.31□□□□□ -0.6
LRRK2-203ENST00000416796 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
LRRK2-203ENST00000416796 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
LRRK2-203ENST00000416796 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
LRRK2-203ENST00000416796 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
LRRK2-203ENST00000416796 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.6
LRRK2-203ENST00000416796 KIF12Q96FN5 646 aa11.27□□□□□ -0.6
LRRK2-203ENST00000416796 NLRP6P59044 892 aa11.27□□□□□ -0.61
LRRK2-203ENST00000416796 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
LRRK2-203ENST00000416796 SOX12O15370 315 aa11.24□□□□□ -0.61
LRRK2-203ENST00000416796 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
LRRK2-203ENST00000416796 GOLGA2Q08379 1002 aa11.24□□□□□ -0.61
LRRK2-203ENST00000416796 KCNV2Q8TDN2 545 aa11.24□□□□□ -0.61
LRRK2-203ENST00000416796 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
LRRK2-203ENST00000416796 PPP1R37O75864 691 aa11.2□□□□□ -0.62
LRRK2-203ENST00000416796 TULP1O00294 542 aaPredicted RBP11.19□□□□□ -0.62
LRRK2-203ENST00000416796 PHF12Q96QT6 1004 aa11.19□□□□□ -0.62
LRRK2-203ENST00000416796 FBXO22Q8NEZ5 403 aa11.17□□□□□ -0.62
LRRK2-203ENST00000416796 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
LRRK2-203ENST00000416796 E2F4Q16254 413 aa11.13□□□□□ -0.63
LRRK2-203ENST00000416796 LMOD2Q6P5Q4 547 aa11.12□□□□□ -0.63
LRRK2-203ENST00000416796 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
LRRK2-203ENST00000416796 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
LRRK2-203ENST00000416796 LARP6Q9BRS8 491 aaKnown RBP11.08□□□□□ -0.64
LRRK2-203ENST00000416796 PDE4AP27815 886 aa11.07□□□□□ -0.64
LRRK2-203ENST00000416796 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
LRRK2-203ENST00000416796 MS4A3Q96HJ5 214 aa11.05□□□□□ -0.64
LRRK2-203ENST00000416796 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
LRRK2-203ENST00000416796 NCKAP5LQ9HCH0 1330 aa11.03□□□□□ -0.64
LRRK2-203ENST00000416796 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.64
LRRK2-203ENST00000416796 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
LRRK2-203ENST00000416796 SEMA3EO15041 775 aa11.01□□□□□ -0.65
LRRK2-203ENST00000416796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.65
LRRK2-203ENST00000416796 C19orf67A6NJJ6 358 aa10.97□□□□□ -0.65
LRRK2-203ENST00000416796 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.65
LRRK2-203ENST00000416796 CRISPLD2Q9H0B8 497 aa10.96□□□□□ -0.65
LRRK2-203ENST00000416796 TIE1P35590 1138 aa10.95□□□□□ -0.66
LRRK2-203ENST00000416796 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
LRRK2-203ENST00000416796 TTLL13PA6NNM8 815 aa10.95□□□□□ -0.66
LRRK2-203ENST00000416796 MFSD10Q14728 455 aa10.95□□□□□ -0.66
LRRK2-203ENST00000416796 ZC3H15Q8WU90 426 aaKnown RBP10.92□□□□□ -0.66
LRRK2-203ENST00000416796 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
LRRK2-203ENST00000416796 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
LRRK2-203ENST00000416796 TMEM132AQ24JP5 1023 aa10.89□□□□□ -0.67
LRRK2-203ENST00000416796 GTF3C3Q9Y5Q9 886 aa10.89□□□□□ -0.67
LRRK2-203ENST00000416796 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
LRRK2-203ENST00000416796 HAX1O00165 279 aa10.86□□□□□ -0.67
LRRK2-203ENST00000416796 GALR2O43603 387 aaPredicted RBP10.85□□□□□ -0.67
LRRK2-203ENST00000416796 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
LRRK2-203ENST00000416796 CAMK2BQ13554 666 aa10.85□□□□□ -0.67
LRRK2-203ENST00000416796 G3V3G9 751 aa10.84□□□□□ -0.67
LRRK2-203ENST00000416796 TMC2Q8TDI7 906 aa10.84□□□□□ -0.67
LRRK2-203ENST00000416796 ARIH1Q9Y4X5 557 aaPredicted RBP10.84□□□□□ -0.67
LRRK2-203ENST00000416796 SLC24A3Q9HC58 644 aa10.83□□□□□ -0.68
LRRK2-203ENST00000416796 NEUROD2Q15784 382 aa10.82□□□□□ -0.68
LRRK2-203ENST00000416796 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms