RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 NPM1P06748 294 aaKnown RBP eCLIP11.3□□□□□ -0.6
TTC39DP-201ENST00000416781 GSE1Q14687 1217 aa11.29□□□□□ -0.6
TTC39DP-201ENST00000416781 FAM212AQ96EL1 285 aa11.27□□□□□ -0.6
TTC39DP-201ENST00000416781 DCAF8Q5TAQ9 597 aa11.26□□□□□ -0.61
TTC39DP-201ENST00000416781 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
TTC39DP-201ENST00000416781 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
TTC39DP-201ENST00000416781 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
TTC39DP-201ENST00000416781 RGL2O15211 777 aa11.21□□□□□ -0.61
TTC39DP-201ENST00000416781 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
TTC39DP-201ENST00000416781 CLCN6P51797 869 aa11.12□□□□□ -0.63
TTC39DP-201ENST00000416781 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
TTC39DP-201ENST00000416781 PYGBP11216 843 aa11.09□□□□□ -0.63
TTC39DP-201ENST00000416781 RNF25Q96BH1 459 aaPredicted RBP11.09□□□□□ -0.63
TTC39DP-201ENST00000416781 PCDH10Q9P2E7 1040 aa11.08□□□□□ -0.64
TTC39DP-201ENST00000416781 PAK3O75914 559 aaPredicted RBP11.08□□□□□ -0.64
TTC39DP-201ENST00000416781 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
TTC39DP-201ENST00000416781 CHRM1P11229 460 aaPredicted RBP11.08□□□□□ -0.64
TTC39DP-201ENST00000416781 POTEMA6NI47 508 aa11.05□□□□□ -0.64
TTC39DP-201ENST00000416781 RIOK3O14730 519 aaKnown RBP11.05□□□□□ -0.64
TTC39DP-201ENST00000416781 CHGAP10645 457 aaKnown RBP11.03□□□□□ -0.64
TTC39DP-201ENST00000416781 TAOK2Q9UL54 1235 aa11.03□□□□□ -0.64
TTC39DP-201ENST00000416781 CCDC61Q9Y6R9 512 aa11.01□□□□□ -0.65
TTC39DP-201ENST00000416781 CD44P16070 742 aaKnown RBP11□□□□□ -0.65
TTC39DP-201ENST00000416781 DCBLD2Q96PD2 775 aa11□□□□□ -0.65
TTC39DP-201ENST00000416781 PLCB2Q00722 1185 aa10.99□□□□□ -0.65
TTC39DP-201ENST00000416781 BBXQ8WY36 941 aaPredicted RBP10.99□□□□□ -0.65
TTC39DP-201ENST00000416781 VGFO15240 615 aaPredicted RBP10.98□□□□□ -0.65
TTC39DP-201ENST00000416781 POTEGQ6S5H5 508 aa10.98□□□□□ -0.65
TTC39DP-201ENST00000416781 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
TTC39DP-201ENST00000416781 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
TTC39DP-201ENST00000416781 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
TTC39DP-201ENST00000416781 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
TTC39DP-201ENST00000416781 STK25O00506 426 aa10.93□□□□□ -0.66
TTC39DP-201ENST00000416781 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
TTC39DP-201ENST00000416781 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
TTC39DP-201ENST00000416781 SGIP1Q9BQI5 828 aa10.9□□□□□ -0.66
TTC39DP-201ENST00000416781 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
TTC39DP-201ENST00000416781 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.66
TTC39DP-201ENST00000416781 KIF12Q96FN5 646 aa10.89□□□□□ -0.67
TTC39DP-201ENST00000416781 MAP3K13O43283 966 aa10.89□□□□□ -0.67
TTC39DP-201ENST00000416781 ZNF579Q8NAF0 562 aaKnown RBP10.89□□□□□ -0.67
TTC39DP-201ENST00000416781 OTUD5Q96G74 571 aa10.89□□□□□ -0.67
TTC39DP-201ENST00000416781 PHF12Q96QT6 1004 aa10.89□□□□□ -0.67
TTC39DP-201ENST00000416781 PAXIP1Q6ZW49 1069 aaPredicted RBP10.88□□□□□ -0.67
TTC39DP-201ENST00000416781 BCL11BQ9C0K0 894 aaPredicted RBP10.88□□□□□ -0.67
TTC39DP-201ENST00000416781 STK24Q9Y6E0 443 aa10.88□□□□□ -0.67
TTC39DP-201ENST00000416781 CFAP44Q96MT7 982 aa10.87□□□□□ -0.67
TTC39DP-201ENST00000416781 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
TTC39DP-201ENST00000416781 HAP1P54257 671 aaPredicted RBP10.85□□□□□ -0.67
TTC39DP-201ENST00000416781 IFNL1Q8IU54 200 aa10.85□□□□□ -0.67
TTC39DP-201ENST00000416781 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
TTC39DP-201ENST00000416781 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
TTC39DP-201ENST00000416781 PSEN1P49768 467 aa10.82□□□□□ -0.68
TTC39DP-201ENST00000416781 NKX1-1Q15270 411 aaPredicted RBP10.8□□□□□ -0.68
TTC39DP-201ENST00000416781 MS4A3Q96HJ5 214 aa10.76□□□□□ -0.69
TTC39DP-201ENST00000416781 GTPBP6O43824 516 aaPredicted RBP10.72□□□□□ -0.69
TTC39DP-201ENST00000416781 RYDENQ9NUL5 291 aaKnown RBP10.71□□□□□ -0.69
TTC39DP-201ENST00000416781 CABP2Q9NPB3 220 aa10.7□□□□□ -0.7
TTC39DP-201ENST00000416781 TMEM106CQ9BVX2 250 aa10.68□□□□□ -0.7
TTC39DP-201ENST00000416781 TRPC6Q9Y210 931 aa10.68□□□□□ -0.7
TTC39DP-201ENST00000416781 POTEB2H3BUK9 544 aa10.66□□□□□ -0.7
TTC39DP-201ENST00000416781 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
TTC39DP-201ENST00000416781 GALR2O43603 387 aaPredicted RBP10.66□□□□□ -0.7
TTC39DP-201ENST00000416781 VSIG10Q8N0Z9 540 aa10.65□□□□□ -0.7
TTC39DP-201ENST00000416781 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
TTC39DP-201ENST00000416781 GOLGA2Q08379 1002 aa10.64□□□□□ -0.71
TTC39DP-201ENST00000416781 TIE1P35590 1138 aa10.63□□□□□ -0.71
TTC39DP-201ENST00000416781 MFRPQ9BY79 579 aa10.63□□□□□ -0.71
TTC39DP-201ENST00000416781 MAMSTRQ6ZN01 415 aa10.62□□□□□ -0.71
TTC39DP-201ENST00000416781 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
TTC39DP-201ENST00000416781 SOX12O15370 315 aa10.6□□□□□ -0.71
TTC39DP-201ENST00000416781 BMP2KQ9NSY1 1161 aaPredicted RBP10.6□□□□□ -0.71
TTC39DP-201ENST00000416781 NLRP6P59044 892 aa10.59□□□□□ -0.71
TTC39DP-201ENST00000416781 PHF8Q9UPP1 1060 aa10.58□□□□□ -0.72
TTC39DP-201ENST00000416781 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
TTC39DP-201ENST00000416781 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
TTC39DP-201ENST00000416781 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
TTC39DP-201ENST00000416781 TRIM35Q9UPQ4 493 aa10.54□□□□□ -0.72
TTC39DP-201ENST00000416781 FAM163AQ96GL9 167 aaPredicted RBP10.53□□□□□ -0.72
TTC39DP-201ENST00000416781 ATMINO43313 823 aaPredicted RBP10.49□□□□□ -0.73
TTC39DP-201ENST00000416781 PPP1R37O75864 691 aa10.49□□□□□ -0.73
TTC39DP-201ENST00000416781 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
TTC39DP-201ENST00000416781 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
TTC39DP-201ENST00000416781 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
TTC39DP-201ENST00000416781 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
TTC39DP-201ENST00000416781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.47□□□□□ -0.73
TTC39DP-201ENST00000416781 LCE2DQ5TA82 110 aaPredicted RBP10.47□□□□□ -0.73
TTC39DP-201ENST00000416781 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
TTC39DP-201ENST00000416781 C7P10643 843 aa10.44□□□□□ -0.74
TTC39DP-201ENST00000416781 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
TTC39DP-201ENST00000416781 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
TTC39DP-201ENST00000416781 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
TTC39DP-201ENST00000416781 IER5LQ5T953 404 aa10.41□□□□□ -0.74
TTC39DP-201ENST00000416781 CDAN1Q8IWY9 1227 aa10.41□□□□□ -0.74
TTC39DP-201ENST00000416781 PELP1Q8IZL8 1130 aaKnown RBP10.4□□□□□ -0.74
TTC39DP-201ENST00000416781 IRX5P78411 483 aaPredicted RBP10.38□□□□□ -0.75
TTC39DP-201ENST00000416781 OCEL1Q9H607 264 aa10.37□□□□□ -0.75
TTC39DP-201ENST00000416781 PLCG2P16885 1265 aa10.36□□□□□ -0.75
TTC39DP-201ENST00000416781 PDCD7Q8N8D1 485 aaKnown RBP10.36□□□□□ -0.75
TTC39DP-201ENST00000416781 BCANQ96GW7 911 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms