RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 ECM2O94769 699 aaPredicted RBP5.01□□□□□ -1.61
CTDSPL-203ENST00000416688 CDK11AQ9UQ88 783 aaPredicted RBP5□□□□□ -1.61
CTDSPL-203ENST00000416688 PDIA4P13667 645 aaKnown RBP4.98□□□□□ -1.61
CTDSPL-203ENST00000416688 CDK11BP21127 795 aaKnown RBP4.98□□□□□ -1.61
CTDSPL-203ENST00000416688 RSPH6AQ9H0K4 717 aa4.98□□□□□ -1.61
CTDSPL-203ENST00000416688 ZMYND15Q9H091 742 aa4.97□□□□□ -1.61
CTDSPL-203ENST00000416688 HSP90B1P14625 803 aaKnown RBP4.96□□□□□ -1.62
CTDSPL-203ENST00000416688 BRPF1P55201 1214 aaPredicted RBP4.96□□□□□ -1.62
CTDSPL-203ENST00000416688 LOC105371045A0A1W2PR82 267 aa4.94□□□□□ -1.62
CTDSPL-203ENST00000416688 POTEHQ6S545 545 aa4.94□□□□□ -1.62
CTDSPL-203ENST00000416688 RBM42Q9BTD8 480 aaKnown RBP4.94□□□□□ -1.62
CTDSPL-203ENST00000416688 SPDYE4A6NLX3 237 aa4.93□□□□□ -1.62
CTDSPL-203ENST00000416688 CHGAP10645 457 aaKnown RBP4.92□□□□□ -1.62
CTDSPL-203ENST00000416688 NEUROD2Q15784 382 aa4.92□□□□□ -1.62
CTDSPL-203ENST00000416688 SPOCK2Q92563 424 aa4.92□□□□□ -1.62
CTDSPL-203ENST00000416688 ARID3AQ99856 593 aa4.92□□□□□ -1.62
CTDSPL-203ENST00000416688 ZBTB12Q9Y330 459 aaPredicted RBP4.91□□□□□ -1.62
CTDSPL-203ENST00000416688 P3H3Q8IVL6 736 aa4.9□□□□□ -1.63
CTDSPL-203ENST00000416688 RGL2O15211 777 aa4.89□□□□□ -1.63
CTDSPL-203ENST00000416688 PROM2Q8N271 834 aa4.89□□□□□ -1.63
CTDSPL-203ENST00000416688 LMOD2Q6P5Q4 547 aa4.88□□□□□ -1.63
CTDSPL-203ENST00000416688 OSCARQ8IYS5 282 aa4.88□□□□□ -1.63
CTDSPL-203ENST00000416688 PUS7Q96PZ0 661 aaKnown RBP4.87□□□□□ -1.63
CTDSPL-203ENST00000416688 MKRN4PQ13434 485 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL-203ENST00000416688 AKT1S1Q96B36 256 aa4.86□□□□□ -1.63
CTDSPL-203ENST00000416688 CHRDL2Q6WN34 429 aa4.85□□□□□ -1.63
CTDSPL-203ENST00000416688 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.85□□□□□ -1.63
CTDSPL-203ENST00000416688 KCTD17Q8N5Z5 321 aa4.84□□□□□ -1.63
CTDSPL-203ENST00000416688 IGSF3O75054 1194 aa4.83□□□□□ -1.64
CTDSPL-203ENST00000416688 REM2Q8IYK8 340 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL-203ENST00000416688 RAD21O60216 631 aa4.82□□□□□ -1.64
CTDSPL-203ENST00000416688 HS6ST3Q8IZP7 471 aa4.82□□□□□ -1.64
CTDSPL-203ENST00000416688 NECTIN2Q92692 538 aa4.81□□□□□ -1.64
CTDSPL-203ENST00000416688 APBB1O00213 710 aa4.8□□□□□ -1.64
CTDSPL-203ENST00000416688 SPDYE2BA6NHP3 402 aa4.79□□□□□ -1.64
CTDSPL-203ENST00000416688 SPDYE6P0CI01 402 aa4.79□□□□□ -1.64
CTDSPL-203ENST00000416688 SPDYE2Q495Y8 402 aa4.79□□□□□ -1.64
CTDSPL-203ENST00000416688 CHMP4AQ9BY43 222 aa4.79□□□□□ -1.64
CTDSPL-203ENST00000416688 PITPNM1O00562 1244 aa4.78□□□□□ -1.64
CTDSPL-203ENST00000416688 C1orf115Q9H7X2 142 aa4.78□□□□□ -1.64
CTDSPL-203ENST00000416688 TMCO4Q5TGY1 634 aa4.77□□□□□ -1.65
CTDSPL-203ENST00000416688 TRIM41Q8WV44 630 aa4.77□□□□□ -1.65
CTDSPL-203ENST00000416688 SLC24A3Q9HC58 644 aa4.77□□□□□ -1.65
CTDSPL-203ENST00000416688 BRD2P25440 801 aaKnown RBP4.76□□□□□ -1.65
CTDSPL-203ENST00000416688 PIP4P2Q8N4L2 257 aa4.76□□□□□ -1.65
CTDSPL-203ENST00000416688 RGS22Q8NE09 1264 aa4.76□□□□□ -1.65
CTDSPL-203ENST00000416688 ZC3H15Q8WU90 426 aaKnown RBP4.76□□□□□ -1.65
CTDSPL-203ENST00000416688 TRAIPQ9BWF2 469 aa4.76□□□□□ -1.65
CTDSPL-203ENST00000416688 SSUH2Q9Y2M2 353 aa4.76□□□□□ -1.65
CTDSPL-203ENST00000416688 E9PSI1 815 aa4.75□□□□□ -1.65
CTDSPL-203ENST00000416688 PLEKHG5O94827 1062 aa4.75□□□□□ -1.65
CTDSPL-203ENST00000416688 RBM25P49756 843 aaKnown RBP4.75□□□□□ -1.65
CTDSPL-203ENST00000416688 RYDENQ9NUL5 291 aaKnown RBP4.75□□□□□ -1.65
CTDSPL-203ENST00000416688 WDR70Q9NW82 654 aa4.75□□□□□ -1.65
CTDSPL-203ENST00000416688 ARID3CA6NKF2 412 aa4.74□□□□□ -1.65
CTDSPL-203ENST00000416688 FXR2P51116 673 aaKnown RBP eCLIP4.74□□□□□ -1.65
CTDSPL-203ENST00000416688 MTMR7Q9Y216 660 aa4.74□□□□□ -1.65
CTDSPL-203ENST00000416688 GTPBP6O43824 516 aaPredicted RBP4.73□□□□□ -1.65
CTDSPL-203ENST00000416688 FLIIQ13045 1269 aa4.73□□□□□ -1.65
CTDSPL-203ENST00000416688 AEBP1Q8IUX7 1158 aa4.73□□□□□ -1.65
CTDSPL-203ENST00000416688 ZNF692Q9BU19 519 aaPredicted RBP4.73□□□□□ -1.65
CTDSPL-203ENST00000416688 CIZ1Q9ULV3 898 aaPredicted RBP4.73□□□□□ -1.65
CTDSPL-203ENST00000416688 POLR3GLQ9BT43 218 aa4.72□□□□□ -1.65
CTDSPL-203ENST00000416688 MFAP1P55081 439 aaKnown RBP4.71□□□□□ -1.66
CTDSPL-203ENST00000416688 RSPH4AQ5TD94 716 aa4.71□□□□□ -1.66
CTDSPL-203ENST00000416688 PLCD3Q8N3E9 789 aa4.71□□□□□ -1.66
CTDSPL-203ENST00000416688 CCDC82Q8N4S0 544 aa4.7□□□□□ -1.66
CTDSPL-203ENST00000416688 USP35Q9P2H5 1018 aa4.7□□□□□ -1.66
CTDSPL-203ENST00000416688 STAG3Q9UJ98 1225 aa4.7□□□□□ -1.66
CTDSPL-203ENST00000416688 IL27Q8NEV9 243 aa4.69□□□□□ -1.66
CTDSPL-203ENST00000416688 UBE2Q2Q8WVN8 375 aa4.69□□□□□ -1.66
CTDSPL-203ENST00000416688 NKX1-1Q15270 411 aaPredicted RBP4.68□□□□□ -1.66
CTDSPL-203ENST00000416688 SPDYE1Q8NFV5 336 aaPredicted RBP4.68□□□□□ -1.66
CTDSPL-203ENST00000416688 KCNV2Q8TDN2 545 aa4.68□□□□□ -1.66
CTDSPL-203ENST00000416688 PATL2C9JE40 543 aaKnown RBP4.67□□□□□ -1.66
CTDSPL-203ENST00000416688 ZMYND10O75800 440 aa4.67□□□□□ -1.66
CTDSPL-203ENST00000416688 FOXD4L5Q5VV16 416 aaPredicted RBP4.67□□□□□ -1.66
CTDSPL-203ENST00000416688 PABPN1Q86U42 306 aaKnown RBP eCLIP4.67□□□□□ -1.66
CTDSPL-203ENST00000416688 FOXD4L4Q8WXT5 416 aaPredicted RBP4.67□□□□□ -1.66
CTDSPL-203ENST00000416688 GZF1Q9H116 711 aaPredicted RBP4.67□□□□□ -1.66
CTDSPL-203ENST00000416688 A6NJR5 290 aa4.66□□□□□ -1.66
CTDSPL-203ENST00000416688 CANXP27824 592 aaKnown RBP4.66□□□□□ -1.66
CTDSPL-203ENST00000416688 PDE4CQ08493 712 aa4.66□□□□□ -1.66
CTDSPL-203ENST00000416688 MKRN3Q13064 507 aaKnown RBP4.66□□□□□ -1.66
CTDSPL-203ENST00000416688 SMYD5Q6GMV2 418 aa4.66□□□□□ -1.66
CTDSPL-203ENST00000416688 FBXW7Q969H0 707 aa4.66□□□□□ -1.66
CTDSPL-203ENST00000416688 AK7Q96M32 723 aa4.66□□□□□ -1.66
CTDSPL-203ENST00000416688 ZBTB47Q9UFB7 747 aaPredicted RBP4.66□□□□□ -1.66
CTDSPL-203ENST00000416688 CLEC11AQ9Y240 323 aa4.66□□□□□ -1.66
CTDSPL-203ENST00000416688 TRAK2O60296 914 aa4.65□□□□□ -1.67
CTDSPL-203ENST00000416688 EVX2Q03828 476 aa4.65□□□□□ -1.67
CTDSPL-203ENST00000416688 TAF7LQ5H9L4 462 aa4.65□□□□□ -1.67
CTDSPL-203ENST00000416688 SP7Q8TDD2 431 aaPredicted RBP4.64□□□□□ -1.67
CTDSPL-203ENST00000416688 ARHGEF1Q92888 912 aaKnown RBP4.64□□□□□ -1.67
CTDSPL-203ENST00000416688 CCDC97Q96F63 343 aaPredicted RBP4.64□□□□□ -1.67
CTDSPL-203ENST00000416688 SERPINA10Q9UK55 444 aa4.64□□□□□ -1.67
CTDSPL-203ENST00000416688 PRKAR2AP13861 404 aaKnown RBP4.63□□□□□ -1.67
CTDSPL-203ENST00000416688 FAM9AQ8IZU1 332 aaPredicted RBP4.63□□□□□ -1.67
CTDSPL-203ENST00000416688 ZNF428Q96B54 188 aa4.63□□□□□ -1.67
CTDSPL-203ENST00000416688 KDM4CQ9H3R0 1056 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms