RNA–Protein interactions for RNA: ENST00000416135.5

RAD50-202, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-202ENST00000416135 RASEFQ8IZ41 740 aa16.2■□□□□ 0.18
RAD50-202ENST00000416135 ATMINO43313 823 aaPredicted RBP16.18■□□□□ 0.18
RAD50-202ENST00000416135 KIF12Q96FN5 646 aa16.17■□□□□ 0.18
RAD50-202ENST00000416135 OTUD5Q96G74 571 aa16.17■□□□□ 0.18
RAD50-202ENST00000416135 FKBP8Q14318 412 aa16.16■□□□□ 0.18
RAD50-202ENST00000416135 TRPC6Q9Y210 931 aa16.11■□□□□ 0.17
RAD50-202ENST00000416135 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
RAD50-202ENST00000416135 PLCD3Q8N3E9 789 aa16.08■□□□□ 0.16
RAD50-202ENST00000416135 METRNQ9UJH8 293 aa16.08■□□□□ 0.16
RAD50-202ENST00000416135 MAP3K13O43283 966 aa16.07■□□□□ 0.16
RAD50-202ENST00000416135 ATN1P54259 1190 aaPredicted RBP16.06■□□□□ 0.16
RAD50-202ENST00000416135 POTEJP0CG39 1038 aa16.05■□□□□ 0.16
RAD50-202ENST00000416135 NUBP1P53384 320 aa16.04■□□□□ 0.16
RAD50-202ENST00000416135 BMP2KQ9NSY1 1161 aaPredicted RBP16.03■□□□□ 0.16
RAD50-202ENST00000416135 SLC39A7Q92504 469 aa16.02■□□□□ 0.16
RAD50-202ENST00000416135 C7P10643 843 aa16.01■□□□□ 0.15
RAD50-202ENST00000416135 POTEFA5A3E0 1075 aa15.95■□□□□ 0.14
RAD50-202ENST00000416135 TIE1P35590 1138 aa15.92■□□□□ 0.14
RAD50-202ENST00000416135 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
RAD50-202ENST00000416135 TTLL13PA6NNM8 815 aa15.88■□□□□ 0.13
RAD50-202ENST00000416135 PCDHB13Q9Y5F0 798 aa15.85■□□□□ 0.13
RAD50-202ENST00000416135 SGIP1Q9BQI5 828 aa15.84■□□□□ 0.13
RAD50-202ENST00000416135 IFNL1Q8IU54 200 aa15.82■□□□□ 0.12
RAD50-202ENST00000416135 FAM212AQ96EL1 285 aa15.81■□□□□ 0.12
RAD50-202ENST00000416135 COLQQ9Y215 455 aaPredicted RBP15.81■□□□□ 0.12
RAD50-202ENST00000416135 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
RAD50-202ENST00000416135 MAMSTRQ6ZN01 415 aa15.74■□□□□ 0.11
RAD50-202ENST00000416135 FBXO3Q9UK99 471 aa15.74■□□□□ 0.11
RAD50-202ENST00000416135 LCE2DQ5TA82 110 aaPredicted RBP15.7■□□□□ 0.1
RAD50-202ENST00000416135 POTEMA6NI47 508 aa15.68■□□□□ 0.1
RAD50-202ENST00000416135 PYGBP11216 843 aa15.67■□□□□ 0.1
RAD50-202ENST00000416135 VASPP50552 380 aaPredicted RBP15.67■□□□□ 0.1
RAD50-202ENST00000416135 IER5LQ5T953 404 aa15.67■□□□□ 0.1
RAD50-202ENST00000416135 TMEM106CQ9BVX2 250 aa15.67■□□□□ 0.1
RAD50-202ENST00000416135 SCUBE2Q9NQ36 999 aa15.67■□□□□ 0.1
RAD50-202ENST00000416135 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
RAD50-202ENST00000416135 POTEGQ6S5H5 508 aa15.66■□□□□ 0.1
RAD50-202ENST00000416135 SEC24BO95487 1268 aa15.64■□□□□ 0.09
RAD50-202ENST00000416135 PCDHB8Q9UN66 801 aa15.59■□□□□ 0.09
RAD50-202ENST00000416135 PLSCR2Q9NRY7 297 aa15.57■□□□□ 0.08
RAD50-202ENST00000416135 IRX5P78411 483 aaPredicted RBP15.55■□□□□ 0.08
RAD50-202ENST00000416135 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
RAD50-202ENST00000416135 FAM163AQ96GL9 167 aaPredicted RBP15.51■□□□□ 0.07
RAD50-202ENST00000416135 PLCG2P16885 1265 aa15.46■□□□□ 0.07
RAD50-202ENST00000416135 GSE1Q14687 1217 aa15.45■□□□□ 0.06
RAD50-202ENST00000416135 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
RAD50-202ENST00000416135 CHRM1P11229 460 aaPredicted RBP15.42■□□□□ 0.06
RAD50-202ENST00000416135 OCEL1Q9H607 264 aa15.4■□□□□ 0.06
RAD50-202ENST00000416135 ZNF467Q7Z7K2 595 aaPredicted RBP15.38■□□□□ 0.05
RAD50-202ENST00000416135 SLAIN1Q8ND83 568 aa15.38■□□□□ 0.05
RAD50-202ENST00000416135 PDCD7Q8N8D1 485 aaKnown RBP15.35■□□□□ 0.05
RAD50-202ENST00000416135 PCDH10Q9P2E7 1040 aa15.34■□□□□ 0.05
RAD50-202ENST00000416135 SPOCK2Q92563 424 aa15.31■□□□□ 0.04
RAD50-202ENST00000416135 PSEN1P49768 467 aa15.29■□□□□ 0.04
RAD50-202ENST00000416135 ST18O60284 1047 aa15.27■□□□□ 0.04
RAD50-202ENST00000416135 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
RAD50-202ENST00000416135 ILDR1Q86SU0 546 aaPredicted RBP15.21■□□□□ 0.03
RAD50-202ENST00000416135 MKRN3Q13064 507 aaKnown RBP15.2■□□□□ 0.02
RAD50-202ENST00000416135 PDAP1Q13442 181 aaKnown RBP15.2■□□□□ 0.02
RAD50-202ENST00000416135 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.19■□□□□ 0.02
RAD50-202ENST00000416135 GOLGA2Q08379 1002 aa15.17■□□□□ 0.02
RAD50-202ENST00000416135 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.027e-7■■■□□ 17.6
RAD50-202ENST00000416135 CDAN1Q8IWY9 1227 aa15.15■□□□□ 0.02
RAD50-202ENST00000416135 DPY19L2Q6NUT2 758 aa15.13■□□□□ 0.01
RAD50-202ENST00000416135 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
RAD50-202ENST00000416135 L3MBTL3Q96JM7 780 aaPredicted RBP15.09■□□□□ 0.01
RAD50-202ENST00000416135 C3orf67Q6ZVT6 689 aa15.07■□□□□ 0
RAD50-202ENST00000416135 TMEM121BQ9BXQ6 578 aaPredicted RBP15.04■□□□□ -0
RAD50-202ENST00000416135 SNPHO15079 494 aa15.03■□□□□ -0
RAD50-202ENST00000416135 MARVELD3Q96A59 401 aa15.02■□□□□ -0
RAD50-202ENST00000416135 RNF25Q96BH1 459 aaPredicted RBP14.98□□□□□ -0.01
RAD50-202ENST00000416135 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
RAD50-202ENST00000416135 BOLA1Q9Y3E2 137 aa14.96□□□□□ -0.01
RAD50-202ENST00000416135 EFCAB3Q8N7B9 438 aa14.95□□□□□ -0.02
RAD50-202ENST00000416135 POTEB3A0JP26 581 aa14.88□□□□□ -0.03
RAD50-202ENST00000416135 HOXB3P14651 431 aaPredicted RBP14.88□□□□□ -0.03
RAD50-202ENST00000416135 POTEBQ6S5H4 581 aa14.88□□□□□ -0.03
RAD50-202ENST00000416135 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
RAD50-202ENST00000416135 EMP3P54852 163 aa14.84□□□□□ -0.03
RAD50-202ENST00000416135 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.83□□□□□ -0.04
RAD50-202ENST00000416135 ZFP91Q96JP5 570 aaPredicted RBP14.83□□□□□ -0.04
RAD50-202ENST00000416135 MS4A4AQ96JQ5 239 aa14.82□□□□□ -0.04
RAD50-202ENST00000416135 SPNS2Q8IVW8 549 aa14.81□□□□□ -0.04
RAD50-202ENST00000416135 G3V3G9 751 aa14.8□□□□□ -0.04
RAD50-202ENST00000416135 TMEM92Q6UXU6 159 aa14.79□□□□□ -0.04
RAD50-202ENST00000416135 HS3ST6Q96QI5 342 aa14.78□□□□□ -0.04
RAD50-202ENST00000416135 VGFO15240 615 aaPredicted RBP14.77□□□□□ -0.05
RAD50-202ENST00000416135 MICALL2Q8IY33 904 aa14.77□□□□□ -0.05
RAD50-202ENST00000416135 KRTAP3-3Q9BYR6 98 aa14.77□□□□□ -0.05
RAD50-202ENST00000416135 KRTAP3-2Q9BYR7 98 aa14.77□□□□□ -0.05
RAD50-202ENST00000416135 FAM205CA6NFA0 338 aa14.76□□□□□ -0.05
RAD50-202ENST00000416135 MMRN1Q13201 1228 aa14.76□□□□□ -0.05
RAD50-202ENST00000416135 PHF8Q9UPP1 1060 aa14.75□□□□□ -0.05
RAD50-202ENST00000416135 SOX12O15370 315 aa14.74□□□□□ -0.05
RAD50-202ENST00000416135 HOXB1P14653 301 aaPredicted RBP14.69□□□□□ -0.06
RAD50-202ENST00000416135 DOK7Q18PE1 504 aa14.65□□□□□ -0.06
RAD50-202ENST00000416135 FBXO22Q8NEZ5 403 aa14.65□□□□□ -0.06
RAD50-202ENST00000416135 BCL11BQ9C0K0 894 aaPredicted RBP14.64□□□□□ -0.07
RAD50-202ENST00000416135 ZNF710Q8N1W2 664 aa14.63□□□□□ -0.07
RAD50-202ENST00000416135 MFRPQ9BY79 579 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms