RNA–Protein interactions for RNA: ENST00000416002.1

AF240627.1-201, humanhuman

TSL 3 BASIC

Gene AF240627.1, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF240627.1-201ENST00000416002 MS4A3Q96HJ5 214 aa14.56□□□□□ -0.08
AF240627.1-201ENST00000416002 RASEFQ8IZ41 740 aa14.54□□□□□ -0.08
AF240627.1-201ENST00000416002 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
AF240627.1-201ENST00000416002 KIF12Q96FN5 646 aa14.5□□□□□ -0.09
AF240627.1-201ENST00000416002 ASTLQ6HA08 431 aaPredicted RBP14.45□□□□□ -0.1
AF240627.1-201ENST00000416002 NUBP1P53384 320 aa14.44□□□□□ -0.1
AF240627.1-201ENST00000416002 ATMINO43313 823 aaPredicted RBP14.43□□□□□ -0.1
AF240627.1-201ENST00000416002 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
AF240627.1-201ENST00000416002 MAP3K13O43283 966 aa14.42□□□□□ -0.1
AF240627.1-201ENST00000416002 FAM212AQ96EL1 285 aa14.37□□□□□ -0.11
AF240627.1-201ENST00000416002 SLC39A7Q92504 469 aa14.36□□□□□ -0.11
AF240627.1-201ENST00000416002 C7P10643 843 aa14.34□□□□□ -0.11
AF240627.1-201ENST00000416002 SGIP1Q9BQI5 828 aa14.33□□□□□ -0.12
AF240627.1-201ENST00000416002 METRNQ9UJH8 293 aa14.33□□□□□ -0.12
AF240627.1-201ENST00000416002 ATN1P54259 1190 aaPredicted RBP14.32□□□□□ -0.12
AF240627.1-201ENST00000416002 POTEB2H3BUK9 544 aa14.31□□□□□ -0.12
AF240627.1-201ENST00000416002 TRPC6Q9Y210 931 aa14.31□□□□□ -0.12
AF240627.1-201ENST00000416002 TIE1P35590 1138 aa14.3□□□□□ -0.12
AF240627.1-201ENST00000416002 BMP2KQ9NSY1 1161 aaPredicted RBP14.3□□□□□ -0.12
AF240627.1-201ENST00000416002 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
AF240627.1-201ENST00000416002 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
AF240627.1-201ENST00000416002 DCAF8Q5TAQ9 597 aa14.28□□□□□ -0.12
AF240627.1-201ENST00000416002 KLHL34Q8N239 644 aa14.27□□□□□ -0.13
AF240627.1-201ENST00000416002 OTUD5Q96G74 571 aa14.25□□□□□ -0.13
AF240627.1-201ENST00000416002 TTLL13PA6NNM8 815 aa14.21□□□□□ -0.13
AF240627.1-201ENST00000416002 IFNL1Q8IU54 200 aa14.2□□□□□ -0.14
AF240627.1-201ENST00000416002 PYGBP11216 843 aa14.16□□□□□ -0.14
AF240627.1-201ENST00000416002 GSE1Q14687 1217 aa14.14□□□□□ -0.15
AF240627.1-201ENST00000416002 MAMSTRQ6ZN01 415 aa14.13□□□□□ -0.15
AF240627.1-201ENST00000416002 TRIM35Q9UPQ4 493 aa14.13□□□□□ -0.15
AF240627.1-201ENST00000416002 POTEJP0CG39 1038 aa14.12□□□□□ -0.15
AF240627.1-201ENST00000416002 SEC24BO95487 1268 aa14.11□□□□□ -0.15
AF240627.1-201ENST00000416002 POTEFA5A3E0 1075 aa14.1□□□□□ -0.15
AF240627.1-201ENST00000416002 TMEM106CQ9BVX2 250 aa14.1□□□□□ -0.15
AF240627.1-201ENST00000416002 IER5LQ5T953 404 aa14.09□□□□□ -0.15
AF240627.1-201ENST00000416002 IFNLR1Q8IU57 520 aaPredicted RBP14.05□□□□□ -0.16
AF240627.1-201ENST00000416002 SCUBE2Q9NQ36 999 aa14.05□□□□□ -0.16
AF240627.1-201ENST00000416002 PCDHB8Q9UN66 801 aa14.04□□□□□ -0.16
AF240627.1-201ENST00000416002 COLQQ9Y215 455 aaPredicted RBP14.04□□□□□ -0.16
AF240627.1-201ENST00000416002 SPOCK2Q92563 424 aa14.03□□□□□ -0.16
AF240627.1-201ENST00000416002 CHRM1P11229 460 aaPredicted RBP13.99□□□□□ -0.17
AF240627.1-201ENST00000416002 ZNF467Q7Z7K2 595 aaPredicted RBP13.98□□□□□ -0.17
AF240627.1-201ENST00000416002 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
AF240627.1-201ENST00000416002 PLCG2P16885 1265 aa13.94□□□□□ -0.18
AF240627.1-201ENST00000416002 IRX5P78411 483 aaPredicted RBP13.9□□□□□ -0.18
AF240627.1-201ENST00000416002 OCEL1Q9H607 264 aa13.88□□□□□ -0.19
AF240627.1-201ENST00000416002 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
AF240627.1-201ENST00000416002 PSEN1P49768 467 aa13.85□□□□□ -0.19
AF240627.1-201ENST00000416002 POTEMA6NI47 508 aa13.84□□□□□ -0.19
AF240627.1-201ENST00000416002 FAM163AQ96GL9 167 aaPredicted RBP13.82□□□□□ -0.2
AF240627.1-201ENST00000416002 MKRN3Q13064 507 aaKnown RBP13.81□□□□□ -0.2
AF240627.1-201ENST00000416002 PDAP1Q13442 181 aaKnown RBP13.8□□□□□ -0.2
AF240627.1-201ENST00000416002 POTEGQ6S5H5 508 aa13.8□□□□□ -0.2
AF240627.1-201ENST00000416002 SLAIN1Q8ND83 568 aa13.78□□□□□ -0.2
AF240627.1-201ENST00000416002 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
AF240627.1-201ENST00000416002 LCE2DQ5TA82 110 aaPredicted RBP13.71□□□□□ -0.21
AF240627.1-201ENST00000416002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.21
AF240627.1-201ENST00000416002 PDCD7Q8N8D1 485 aaKnown RBP13.7□□□□□ -0.22
AF240627.1-201ENST00000416002 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.69□□□□□ -0.22
AF240627.1-201ENST00000416002 L3MBTL3Q96JM7 780 aaPredicted RBP13.68□□□□□ -0.22
AF240627.1-201ENST00000416002 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
AF240627.1-201ENST00000416002 PLSCR2Q9NRY7 297 aa13.66□□□□□ -0.22
AF240627.1-201ENST00000416002 PCDH10Q9P2E7 1040 aa13.66□□□□□ -0.22
AF240627.1-201ENST00000416002 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
AF240627.1-201ENST00000416002 ILDR1Q86SU0 546 aaPredicted RBP13.61□□□□□ -0.23
AF240627.1-201ENST00000416002 SNPHO15079 494 aa13.57□□□□□ -0.24
AF240627.1-201ENST00000416002 ST18O60284 1047 aa13.56□□□□□ -0.24
AF240627.1-201ENST00000416002 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
AF240627.1-201ENST00000416002 DPY19L2Q6NUT2 758 aa13.55□□□□□ -0.24
AF240627.1-201ENST00000416002 G3V3G9 751 aa13.53□□□□□ -0.24
AF240627.1-201ENST00000416002 EFCAB3Q8N7B9 438 aa13.52□□□□□ -0.25
AF240627.1-201ENST00000416002 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
AF240627.1-201ENST00000416002 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
AF240627.1-201ENST00000416002 BOLA1Q9Y3E2 137 aa13.5□□□□□ -0.25
AF240627.1-201ENST00000416002 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
AF240627.1-201ENST00000416002 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
AF240627.1-201ENST00000416002 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.25
AF240627.1-201ENST00000416002 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
AF240627.1-201ENST00000416002 SOX12O15370 315 aa13.43□□□□□ -0.26
AF240627.1-201ENST00000416002 CDAN1Q8IWY9 1227 aa13.43□□□□□ -0.26
AF240627.1-201ENST00000416002 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
AF240627.1-201ENST00000416002 MARVELD3Q96A59 401 aa13.34□□□□□ -0.27
AF240627.1-201ENST00000416002 PHF8Q9UPP1 1060 aa13.33□□□□□ -0.28
AF240627.1-201ENST00000416002 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
AF240627.1-201ENST00000416002 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
AF240627.1-201ENST00000416002 MS4A4AQ96JQ5 239 aa13.3□□□□□ -0.28
AF240627.1-201ENST00000416002 STK24Q9Y6E0 443 aa13.3□□□□□ -0.28
AF240627.1-201ENST00000416002 EMP3P54852 163 aa13.28□□□□□ -0.28
AF240627.1-201ENST00000416002 NLRP6P59044 892 aa13.28□□□□□ -0.28
AF240627.1-201ENST00000416002 PKD2Q13563 968 aa13.28□□□□□ -0.28
AF240627.1-201ENST00000416002 STK25O00506 426 aa13.27□□□□□ -0.29
AF240627.1-201ENST00000416002 HOXB3P14651 431 aaPredicted RBP13.24□□□□□ -0.29
AF240627.1-201ENST00000416002 RGL2O15211 777 aa13.23□□□□□ -0.29
AF240627.1-201ENST00000416002 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
AF240627.1-201ENST00000416002 ZNF710Q8N1W2 664 aa13.23□□□□□ -0.29
AF240627.1-201ENST00000416002 FBXO22Q8NEZ5 403 aa13.21□□□□□ -0.29
AF240627.1-201ENST00000416002 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
AF240627.1-201ENST00000416002 TMEM92Q6UXU6 159 aa13.19□□□□□ -0.3
AF240627.1-201ENST00000416002 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
AF240627.1-201ENST00000416002 HS3ST6Q96QI5 342 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms