RNA–Protein interactions for RNA: ENST00000415910.2

LINC01661-201, Transcript of long intergenic non-protein coding RNA 1661, humanhuman

TSL 3 BASIC

Gene LINC01661, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01661-201ENST00000415910 TRIM41Q8WV44 630 aa12.26□□□□□ -0.45
LINC01661-201ENST00000415910 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
LINC01661-201ENST00000415910 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
LINC01661-201ENST00000415910 HAX1O00165 279 aa12.23□□□□□ -0.45
LINC01661-201ENST00000415910 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
LINC01661-201ENST00000415910 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
LINC01661-201ENST00000415910 PYGBP11216 843 aa12.16□□□□□ -0.46
LINC01661-201ENST00000415910 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
LINC01661-201ENST00000415910 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.46
LINC01661-201ENST00000415910 DCAF8L2P0C7V8 631 aa12.1□□□□□ -0.47
LINC01661-201ENST00000415910 RGL2O15211 777 aa12.08□□□□□ -0.48
LINC01661-201ENST00000415910 ZNF579Q8NAF0 562 aaKnown RBP12.08□□□□□ -0.48
LINC01661-201ENST00000415910 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
LINC01661-201ENST00000415910 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
LINC01661-201ENST00000415910 EVX2Q03828 476 aa12.04□□□□□ -0.48
LINC01661-201ENST00000415910 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
LINC01661-201ENST00000415910 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
LINC01661-201ENST00000415910 RIOK3O14730 519 aaKnown RBP12.03□□□□□ -0.48
LINC01661-201ENST00000415910 MAP3K13O43283 966 aa12.03□□□□□ -0.48
LINC01661-201ENST00000415910 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
LINC01661-201ENST00000415910 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
LINC01661-201ENST00000415910 RNF25Q96BH1 459 aaPredicted RBP12.01□□□□□ -0.49
LINC01661-201ENST00000415910 CLCN6P51797 869 aa11.99□□□□□ -0.49
LINC01661-201ENST00000415910 VGFO15240 615 aaPredicted RBP11.97□□□□□ -0.49
LINC01661-201ENST00000415910 PCDHB8Q9UN66 801 aa11.97□□□□□ -0.49
LINC01661-201ENST00000415910 IFNL1Q8IU54 200 aa11.96□□□□□ -0.49
LINC01661-201ENST00000415910 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
LINC01661-201ENST00000415910 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
LINC01661-201ENST00000415910 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.5
LINC01661-201ENST00000415910 PSEN1P49768 467 aa11.89□□□□□ -0.51
LINC01661-201ENST00000415910 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
LINC01661-201ENST00000415910 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
LINC01661-201ENST00000415910 STK25O00506 426 aa11.87□□□□□ -0.51
LINC01661-201ENST00000415910 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
LINC01661-201ENST00000415910 GABBR2O75899 941 aa11.86□□□□□ -0.51
LINC01661-201ENST00000415910 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
LINC01661-201ENST00000415910 HS6ST3Q8IZP7 471 aa11.84□□□□□ -0.51
LINC01661-201ENST00000415910 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
LINC01661-201ENST00000415910 BCL11BQ9C0K0 894 aaPredicted RBP11.82□□□□□ -0.52
LINC01661-201ENST00000415910 TIE1P35590 1138 aa11.8□□□□□ -0.52
LINC01661-201ENST00000415910 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
LINC01661-201ENST00000415910 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
LINC01661-201ENST00000415910 BBXQ8WY36 941 aaPredicted RBP11.78□□□□□ -0.52
LINC01661-201ENST00000415910 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
LINC01661-201ENST00000415910 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
LINC01661-201ENST00000415910 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
LINC01661-201ENST00000415910 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
LINC01661-201ENST00000415910 BMP2KQ9NSY1 1161 aaPredicted RBP11.74□□□□□ -0.53
LINC01661-201ENST00000415910 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
LINC01661-201ENST00000415910 DNAJC5Q9H3Z4 198 aa11.71□□□□□ -0.53
LINC01661-201ENST00000415910 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
LINC01661-201ENST00000415910 ASTLQ6HA08 431 aaPredicted RBP11.68□□□□□ -0.54
LINC01661-201ENST00000415910 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
LINC01661-201ENST00000415910 MKRN3Q13064 507 aaKnown RBP11.67□□□□□ -0.54
LINC01661-201ENST00000415910 EFCAB3Q8N7B9 438 aa11.67□□□□□ -0.54
LINC01661-201ENST00000415910 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
LINC01661-201ENST00000415910 SOX12O15370 315 aa11.64□□□□□ -0.55
LINC01661-201ENST00000415910 RYDENQ9NUL5 291 aaKnown RBP11.64□□□□□ -0.55
LINC01661-201ENST00000415910 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
LINC01661-201ENST00000415910 SPRYD3Q8NCJ5 442 aa11.63□□□□□ -0.55
LINC01661-201ENST00000415910 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
LINC01661-201ENST00000415910 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
LINC01661-201ENST00000415910 NLRP6P59044 892 aa11.59□□□□□ -0.55
LINC01661-201ENST00000415910 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
LINC01661-201ENST00000415910 IER5LQ5T953 404 aa11.58□□□□□ -0.56
LINC01661-201ENST00000415910 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
LINC01661-201ENST00000415910 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
LINC01661-201ENST00000415910 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
LINC01661-201ENST00000415910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC01661-201ENST00000415910 PHF8Q9UPP1 1060 aa11.56□□□□□ -0.56
LINC01661-201ENST00000415910 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
LINC01661-201ENST00000415910 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
LINC01661-201ENST00000415910 C7P10643 843 aa11.53□□□□□ -0.56
LINC01661-201ENST00000415910 SEC24BO95487 1268 aa11.52□□□□□ -0.57
LINC01661-201ENST00000415910 FBXO22Q8NEZ5 403 aa11.51□□□□□ -0.57
LINC01661-201ENST00000415910 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
LINC01661-201ENST00000415910 PLCG2P16885 1265 aa11.49□□□□□ -0.57
LINC01661-201ENST00000415910 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
LINC01661-201ENST00000415910 IRX5P78411 483 aaPredicted RBP11.48□□□□□ -0.57
LINC01661-201ENST00000415910 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
LINC01661-201ENST00000415910 MS4A4AQ96JQ5 239 aa11.46□□□□□ -0.57
LINC01661-201ENST00000415910 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
LINC01661-201ENST00000415910 PDCD7Q8N8D1 485 aaKnown RBP11.43□□□□□ -0.58
LINC01661-201ENST00000415910 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
LINC01661-201ENST00000415910 G3V3G9 751 aa11.41□□□□□ -0.58
LINC01661-201ENST00000415910 PPP1R37O75864 691 aa11.41□□□□□ -0.58
LINC01661-201ENST00000415910 DPY19L2Q6NUT2 758 aa11.41□□□□□ -0.58
LINC01661-201ENST00000415910 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
LINC01661-201ENST00000415910 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
LINC01661-201ENST00000415910 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
LINC01661-201ENST00000415910 BOLA1Q9Y3E2 137 aa11.35□□□□□ -0.59
LINC01661-201ENST00000415910 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
LINC01661-201ENST00000415910 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
LINC01661-201ENST00000415910 VSIG10Q8N0Z9 540 aa11.27□□□□□ -0.61
LINC01661-201ENST00000415910 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
LINC01661-201ENST00000415910 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
LINC01661-201ENST00000415910 PDE4AP27815 886 aa11.22□□□□□ -0.61
LINC01661-201ENST00000415910 POTEB2H3BUK9 544 aa11.21□□□□□ -0.61
LINC01661-201ENST00000415910 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
LINC01661-201ENST00000415910 MAMSTRQ6ZN01 415 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms