RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 MIER1Q8N108 512 aa12.24□□□□□ -0.45
TRAPPC13-203ENST00000415825 OTUD5Q96G74 571 aa12.24□□□□□ -0.45
TRAPPC13-203ENST00000415825 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC13-203ENST00000415825 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC13-203ENST00000415825 PROM2Q8N271 834 aa12.19□□□□□ -0.46
TRAPPC13-203ENST00000415825 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
TRAPPC13-203ENST00000415825 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
TRAPPC13-203ENST00000415825 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
TRAPPC13-203ENST00000415825 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
TRAPPC13-203ENST00000415825 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC13-203ENST00000415825 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
TRAPPC13-203ENST00000415825 POTEMA6NI47 508 aa12.11□□□□□ -0.47
TRAPPC13-203ENST00000415825 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
TRAPPC13-203ENST00000415825 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC13-203ENST00000415825 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
TRAPPC13-203ENST00000415825 SEC24BO95487 1268 aa12.06□□□□□ -0.48
TRAPPC13-203ENST00000415825 TIE1P35590 1138 aa12.05□□□□□ -0.48
TRAPPC13-203ENST00000415825 MAP3K13O43283 966 aa12.04□□□□□ -0.48
TRAPPC13-203ENST00000415825 PCDH10Q9P2E7 1040 aa12.04□□□□□ -0.48
TRAPPC13-203ENST00000415825 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC13-203ENST00000415825 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
TRAPPC13-203ENST00000415825 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC13-203ENST00000415825 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
TRAPPC13-203ENST00000415825 FAM212AQ96EL1 285 aa11.97□□□□□ -0.49
TRAPPC13-203ENST00000415825 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
TRAPPC13-203ENST00000415825 TTLL13PA6NNM8 815 aa11.93□□□□□ -0.5
TRAPPC13-203ENST00000415825 POTEJP0CG39 1038 aa11.91□□□□□ -0.5
TRAPPC13-203ENST00000415825 IER5LQ5T953 404 aa11.91□□□□□ -0.5
TRAPPC13-203ENST00000415825 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
TRAPPC13-203ENST00000415825 TRIM35Q9UPQ4 493 aa11.89□□□□□ -0.51
TRAPPC13-203ENST00000415825 PLCG2P16885 1265 aa11.84□□□□□ -0.51
TRAPPC13-203ENST00000415825 FKBP8Q14318 412 aa11.84□□□□□ -0.51
TRAPPC13-203ENST00000415825 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
TRAPPC13-203ENST00000415825 NUBP1P53384 320 aa11.83□□□□□ -0.52
TRAPPC13-203ENST00000415825 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
TRAPPC13-203ENST00000415825 POTEFA5A3E0 1075 aa11.81□□□□□ -0.52
TRAPPC13-203ENST00000415825 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
TRAPPC13-203ENST00000415825 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC13-203ENST00000415825 IFNL1Q8IU54 200 aa11.8□□□□□ -0.52
TRAPPC13-203ENST00000415825 SLAIN1Q8ND83 568 aa11.78□□□□□ -0.52
TRAPPC13-203ENST00000415825 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
TRAPPC13-203ENST00000415825 PYGBP11216 843 aa11.7□□□□□ -0.54
TRAPPC13-203ENST00000415825 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
TRAPPC13-203ENST00000415825 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC13-203ENST00000415825 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
TRAPPC13-203ENST00000415825 SNPHO15079 494 aa11.68□□□□□ -0.54
TRAPPC13-203ENST00000415825 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
TRAPPC13-203ENST00000415825 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
TRAPPC13-203ENST00000415825 GSE1Q14687 1217 aa11.65□□□□□ -0.54
TRAPPC13-203ENST00000415825 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC13-203ENST00000415825 ZNF467Q7Z7K2 595 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC13-203ENST00000415825 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
TRAPPC13-203ENST00000415825 ST18O60284 1047 aa11.6□□□□□ -0.55
TRAPPC13-203ENST00000415825 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
TRAPPC13-203ENST00000415825 C3orf67Q6ZVT6 689 aa11.59□□□□□ -0.55
TRAPPC13-203ENST00000415825 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC13-203ENST00000415825 L3MBTL3Q96JM7 780 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC13-203ENST00000415825 VASPP50552 380 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC13-203ENST00000415825 G3V3G9 751 aa11.52□□□□□ -0.57
TRAPPC13-203ENST00000415825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAPPC13-203ENST00000415825 PSEN1P49768 467 aa11.46□□□□□ -0.57
TRAPPC13-203ENST00000415825 CHRM1P11229 460 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC13-203ENST00000415825 EMP3P54852 163 aa11.42□□□□□ -0.58
TRAPPC13-203ENST00000415825 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
TRAPPC13-203ENST00000415825 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC13-203ENST00000415825 PDAP1Q13442 181 aaKnown RBP11.41□□□□□ -0.58
TRAPPC13-203ENST00000415825 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
TRAPPC13-203ENST00000415825 SPOCK2Q92563 424 aa11.38□□□□□ -0.59
TRAPPC13-203ENST00000415825 MMRN1Q13201 1228 aa11.34□□□□□ -0.59
TRAPPC13-203ENST00000415825 SPNS2Q8IVW8 549 aa11.34□□□□□ -0.59
TRAPPC13-203ENST00000415825 CABP2Q9NPB3 220 aa11.33□□□□□ -0.6
TRAPPC13-203ENST00000415825 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
TRAPPC13-203ENST00000415825 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
TRAPPC13-203ENST00000415825 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
TRAPPC13-203ENST00000415825 TRIM41Q8WV44 630 aa11.27□□□□□ -0.61
TRAPPC13-203ENST00000415825 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
TRAPPC13-203ENST00000415825 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
TRAPPC13-203ENST00000415825 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
TRAPPC13-203ENST00000415825 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
TRAPPC13-203ENST00000415825 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC13-203ENST00000415825 ILDR1Q86SU0 546 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC13-203ENST00000415825 ERBB3P21860 1342 aa11.17□□□□□ -0.62
TRAPPC13-203ENST00000415825 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC13-203ENST00000415825 EFCAB3Q8N7B9 438 aa11.11□□□□□ -0.63
TRAPPC13-203ENST00000415825 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
TRAPPC13-203ENST00000415825 KRTAP3-2Q9BYR7 98 aa11.1□□□□□ -0.63
TRAPPC13-203ENST00000415825 HOXB3P14651 431 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC13-203ENST00000415825 SOX12O15370 315 aa11.07□□□□□ -0.64
TRAPPC13-203ENST00000415825 TAOK2Q9UL54 1235 aa11.07□□□□□ -0.64
TRAPPC13-203ENST00000415825 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
TRAPPC13-203ENST00000415825 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
TRAPPC13-203ENST00000415825 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
TRAPPC13-203ENST00000415825 RIOK3O14730 519 aaKnown RBP11.05□□□□□ -0.64
TRAPPC13-203ENST00000415825 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
TRAPPC13-203ENST00000415825 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
TRAPPC13-203ENST00000415825 VGFO15240 615 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC13-203ENST00000415825 RNF166Q96A37 237 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC13-203ENST00000415825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC13-203ENST00000415825 PTGER2P43116 358 aa10.96□□□□□ -0.65
TRAPPC13-203ENST00000415825 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms