RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
LINC00428-201ENST00000415620 ATMINO43313 823 aaPredicted RBP9.42□□□□□ -0.9
LINC00428-201ENST00000415620 PROM2Q8N271 834 aa9.42□□□□□ -0.9
LINC00428-201ENST00000415620 TSPYL2Q9H2G4 693 aaPredicted RBP9.41□□□□□ -0.9
LINC00428-201ENST00000415620 POTEMA6NI47 508 aa9.4□□□□□ -0.9
LINC00428-201ENST00000415620 MAMSTRQ6ZN01 415 aa9.39□□□□□ -0.91
LINC00428-201ENST00000415620 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
LINC00428-201ENST00000415620 PLEKHG5O94827 1062 aa9.35□□□□□ -0.91
LINC00428-201ENST00000415620 CCDC61Q9Y6R9 512 aa9.35□□□□□ -0.91
LINC00428-201ENST00000415620 ATN1P54259 1190 aaPredicted RBP9.32□□□□□ -0.92
LINC00428-201ENST00000415620 KIF12Q96FN5 646 aa9.32□□□□□ -0.92
LINC00428-201ENST00000415620 PCDH10Q9P2E7 1040 aa9.32□□□□□ -0.92
LINC00428-201ENST00000415620 POTEJP0CG39 1038 aa9.31□□□□□ -0.92
LINC00428-201ENST00000415620 MIER1Q8N108 512 aa9.3□□□□□ -0.92
LINC00428-201ENST00000415620 SCUBE2Q9NQ36 999 aa9.3□□□□□ -0.92
LINC00428-201ENST00000415620 BMP2KQ9NSY1 1161 aaPredicted RBP9.26□□□□□ -0.93
LINC00428-201ENST00000415620 MAP3K13O43283 966 aa9.25□□□□□ -0.93
LINC00428-201ENST00000415620 TIE1P35590 1138 aa9.25□□□□□ -0.93
LINC00428-201ENST00000415620 FAM163AQ96GL9 167 aaPredicted RBP9.25□□□□□ -0.93
LINC00428-201ENST00000415620 RASEFQ8IZ41 740 aa9.23□□□□□ -0.93
LINC00428-201ENST00000415620 TRPC6Q9Y210 931 aa9.22□□□□□ -0.93
LINC00428-201ENST00000415620 POTEFA5A3E0 1075 aa9.2□□□□□ -0.94
LINC00428-201ENST00000415620 SEC24BO95487 1268 aa9.2□□□□□ -0.94
LINC00428-201ENST00000415620 PLCD3Q8N3E9 789 aa9.2□□□□□ -0.94
LINC00428-201ENST00000415620 SGIP1Q9BQI5 828 aa9.18□□□□□ -0.94
LINC00428-201ENST00000415620 TTLL13PA6NNM8 815 aa9.17□□□□□ -0.94
LINC00428-201ENST00000415620 LCE2DQ5TA82 110 aaPredicted RBP9.17□□□□□ -0.94
LINC00428-201ENST00000415620 ZBTB47Q9UFB7 747 aaPredicted RBP9.17□□□□□ -0.94
LINC00428-201ENST00000415620 IER5LQ5T953 404 aa9.14□□□□□ -0.95
LINC00428-201ENST00000415620 COLQQ9Y215 455 aaPredicted RBP9.14□□□□□ -0.95
LINC00428-201ENST00000415620 PCDHB13Q9Y5F0 798 aa9.14□□□□□ -0.95
LINC00428-201ENST00000415620 TRIM35Q9UPQ4 493 aa9.13□□□□□ -0.95
LINC00428-201ENST00000415620 NUBP1P53384 320 aa9.09□□□□□ -0.95
LINC00428-201ENST00000415620 FAM212AQ96EL1 285 aa9.07□□□□□ -0.96
LINC00428-201ENST00000415620 IFNL1Q8IU54 200 aa9.06□□□□□ -0.96
LINC00428-201ENST00000415620 TMEM106CQ9BVX2 250 aa9.05□□□□□ -0.96
LINC00428-201ENST00000415620 PLCG2P16885 1265 aa9.04□□□□□ -0.96
LINC00428-201ENST00000415620 SLAIN1Q8ND83 568 aa9.04□□□□□ -0.96
LINC00428-201ENST00000415620 CDAN1Q8IWY9 1227 aa9.03□□□□□ -0.96
LINC00428-201ENST00000415620 ST18O60284 1047 aa8.98□□□□□ -0.97
LINC00428-201ENST00000415620 DCAF8Q5TAQ9 597 aa8.98□□□□□ -0.97
LINC00428-201ENST00000415620 IRX5P78411 483 aaPredicted RBP8.97□□□□□ -0.97
LINC00428-201ENST00000415620 FKBP8Q14318 412 aa8.95□□□□□ -0.98
LINC00428-201ENST00000415620 OCEL1Q9H607 264 aa8.95□□□□□ -0.98
LINC00428-201ENST00000415620 PYGBP11216 843 aa8.93□□□□□ -0.98
LINC00428-201ENST00000415620 SNPHO15079 494 aa8.92□□□□□ -0.98
LINC00428-201ENST00000415620 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.92□□□□□ -0.98
LINC00428-201ENST00000415620 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
LINC00428-201ENST00000415620 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
LINC00428-201ENST00000415620 PCDHB8Q9UN66 801 aa8.89□□□□□ -0.99
LINC00428-201ENST00000415620 GOLGA2Q08379 1002 aa8.84□□□□□ -0.99
LINC00428-201ENST00000415620 GSE1Q14687 1217 aa8.84□□□□□ -0.99
LINC00428-201ENST00000415620 ZNF467Q7Z7K2 595 aaPredicted RBP8.83□□□□□ -1
LINC00428-201ENST00000415620 MKRN3Q13064 507 aaKnown RBP8.82□□□□□ -1
LINC00428-201ENST00000415620 KLHL34Q8N239 644 aa8.82□□□□□ -1
LINC00428-201ENST00000415620 L3MBTL3Q96JM7 780 aaPredicted RBP8.82□□□□□ -1
LINC00428-201ENST00000415620 C3orf67Q6ZVT6 689 aa8.81□□□□□ -1
LINC00428-201ENST00000415620 MMRN1Q13201 1228 aa8.8□□□□□ -1
LINC00428-201ENST00000415620 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
LINC00428-201ENST00000415620 MARVELD3Q96A59 401 aa8.79□□□□□ -1
LINC00428-201ENST00000415620 PDCD7Q8N8D1 485 aaKnown RBP8.78□□□□□ -1
LINC00428-201ENST00000415620 CHRM1P11229 460 aaPredicted RBP8.77□□□□□ -1.01
LINC00428-201ENST00000415620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.76□□□□□ -1.01
LINC00428-201ENST00000415620 PSEN1P49768 467 aa8.74□□□□□ -1.01
LINC00428-201ENST00000415620 VASPP50552 380 aaPredicted RBP8.74□□□□□ -1.01
LINC00428-201ENST00000415620 EMP3P54852 163 aa8.74□□□□□ -1.01
LINC00428-201ENST00000415620 G3V3G9 751 aa8.69□□□□□ -1.02
LINC00428-201ENST00000415620 PDAP1Q13442 181 aaKnown RBP8.68□□□□□ -1.02
LINC00428-201ENST00000415620 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
LINC00428-201ENST00000415620 FAM205CA6NFA0 338 aa8.67□□□□□ -1.02
LINC00428-201ENST00000415620 ILDR1Q86SU0 546 aaPredicted RBP8.66□□□□□ -1.02
LINC00428-201ENST00000415620 CABP2Q9NPB3 220 aa8.64□□□□□ -1.03
LINC00428-201ENST00000415620 DPY19L2Q6NUT2 758 aa8.63□□□□□ -1.03
LINC00428-201ENST00000415620 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
LINC00428-201ENST00000415620 POTEB3A0JP26 581 aa8.62□□□□□ -1.03
LINC00428-201ENST00000415620 POTEBQ6S5H4 581 aa8.62□□□□□ -1.03
LINC00428-201ENST00000415620 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
LINC00428-201ENST00000415620 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
LINC00428-201ENST00000415620 CIZ1Q9ULV3 898 aaPredicted RBP8.62□□□□□ -1.03
LINC00428-201ENST00000415620 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
LINC00428-201ENST00000415620 ZNF710Q8N1W2 664 aa8.6□□□□□ -1.03
LINC00428-201ENST00000415620 IFNLR1Q8IU57 520 aaPredicted RBP8.58□□□□□ -1.04
LINC00428-201ENST00000415620 HOXB1P14653 301 aaPredicted RBP8.57□□□□□ -1.04
LINC00428-201ENST00000415620 DOK7Q18PE1 504 aa8.57□□□□□ -1.04
LINC00428-201ENST00000415620 HOXB3P14651 431 aaPredicted RBP8.56□□□□□ -1.04
LINC00428-201ENST00000415620 ERBB3P21860 1342 aa8.54□□□□□ -1.04
LINC00428-201ENST00000415620 RIMBP2O15034 1052 aa8.53□□□□□ -1.04
LINC00428-201ENST00000415620 EFCAB3Q8N7B9 438 aa8.5□□□□□ -1.05
LINC00428-201ENST00000415620 TRIM41Q8WV44 630 aa8.5□□□□□ -1.05
LINC00428-201ENST00000415620 VARS2Q5ST30 1063 aaKnown RBP8.46□□□□□ -1.06
LINC00428-201ENST00000415620 RNF166Q96A37 237 aaPredicted RBP8.46□□□□□ -1.06
LINC00428-201ENST00000415620 ZSWIM6Q9HCJ5 1215 aa8.46□□□□□ -1.06
LINC00428-201ENST00000415620 SOX12O15370 315 aa8.43□□□□□ -1.06
LINC00428-201ENST00000415620 MICALL2Q8IY33 904 aa8.43□□□□□ -1.06
LINC00428-201ENST00000415620 ZNF687Q8N1G0 1237 aa8.42□□□□□ -1.06
LINC00428-201ENST00000415620 MYT1LQ9UL68 1186 aa8.42□□□□□ -1.06
LINC00428-201ENST00000415620 TMEM92Q6UXU6 159 aa8.4□□□□□ -1.06
LINC00428-201ENST00000415620 PTGER2P43116 358 aa8.38□□□□□ -1.07
LINC00428-201ENST00000415620 GPR153Q6NV75 609 aa8.38□□□□□ -1.07
LINC00428-201ENST00000415620 RIOK3O14730 519 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms