RNA–Protein interactions for RNA: ENST00000415489.1

PNPT1-203, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 3

Gene PNPT1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-203ENST00000415489 GSE1Q14687 1217 aa12.8□□□□□ -0.36
PNPT1-203ENST00000415489 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
PNPT1-203ENST00000415489 PKD2Q13563 968 aa12.73□□□□□ -0.37
PNPT1-203ENST00000415489 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
PNPT1-203ENST00000415489 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
PNPT1-203ENST00000415489 PHF12Q96QT6 1004 aa12.69□□□□□ -0.38
PNPT1-203ENST00000415489 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
PNPT1-203ENST00000415489 PYGBP11216 843 aa12.68□□□□□ -0.38
PNPT1-203ENST00000415489 CHRM1P11229 460 aaPredicted RBP12.66□□□□□ -0.38
PNPT1-203ENST00000415489 KIF12Q96FN5 646 aa12.65□□□□□ -0.38
PNPT1-203ENST00000415489 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
PNPT1-203ENST00000415489 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
PNPT1-203ENST00000415489 MAP3K13O43283 966 aa12.61□□□□□ -0.39
PNPT1-203ENST00000415489 SP7Q8TDD2 431 aaPredicted RBP12.59□□□□□ -0.39
PNPT1-203ENST00000415489 GABBR2O75899 941 aa12.57□□□□□ -0.4
PNPT1-203ENST00000415489 CLCN6P51797 869 aa12.57□□□□□ -0.4
PNPT1-203ENST00000415489 SGIP1Q9BQI5 828 aa12.56□□□□□ -0.4
PNPT1-203ENST00000415489 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
PNPT1-203ENST00000415489 MS4A3Q96HJ5 214 aa12.53□□□□□ -0.4
PNPT1-203ENST00000415489 RGL2O15211 777 aa12.52□□□□□ -0.41
PNPT1-203ENST00000415489 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.41
PNPT1-203ENST00000415489 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
PNPT1-203ENST00000415489 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.41
PNPT1-203ENST00000415489 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
PNPT1-203ENST00000415489 ZNF467Q7Z7K2 595 aaPredicted RBP12.48□□□□□ -0.41
PNPT1-203ENST00000415489 RIOK3O14730 519 aaKnown RBP12.46□□□□□ -0.41
PNPT1-203ENST00000415489 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
PNPT1-203ENST00000415489 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
PNPT1-203ENST00000415489 PSEN1P49768 467 aa12.38□□□□□ -0.43
PNPT1-203ENST00000415489 PDAP1Q13442 181 aaKnown RBP12.38□□□□□ -0.43
PNPT1-203ENST00000415489 TIE1P35590 1138 aa12.36□□□□□ -0.43
PNPT1-203ENST00000415489 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
PNPT1-203ENST00000415489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
PNPT1-203ENST00000415489 DCAF8L2P0C7V8 631 aa12.34□□□□□ -0.43
PNPT1-203ENST00000415489 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
PNPT1-203ENST00000415489 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
PNPT1-203ENST00000415489 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
PNPT1-203ENST00000415489 TMEM106CQ9BVX2 250 aa12.33□□□□□ -0.44
PNPT1-203ENST00000415489 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
PNPT1-203ENST00000415489 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
PNPT1-203ENST00000415489 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
PNPT1-203ENST00000415489 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
PNPT1-203ENST00000415489 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
PNPT1-203ENST00000415489 CHGAP10645 457 aaKnown RBP12.27□□□□□ -0.45
PNPT1-203ENST00000415489 STK25O00506 426 aa12.26□□□□□ -0.45
PNPT1-203ENST00000415489 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
PNPT1-203ENST00000415489 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
PNPT1-203ENST00000415489 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
PNPT1-203ENST00000415489 TRIM35Q9UPQ4 493 aa12.23□□□□□ -0.45
PNPT1-203ENST00000415489 HS6ST3Q8IZP7 471 aa12.22□□□□□ -0.45
PNPT1-203ENST00000415489 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
PNPT1-203ENST00000415489 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
PNPT1-203ENST00000415489 EFCAB3Q8N7B9 438 aa12.17□□□□□ -0.46
PNPT1-203ENST00000415489 MKRN3Q13064 507 aaKnown RBP12.14□□□□□ -0.47
PNPT1-203ENST00000415489 DNAJC5Q9H3Z4 198 aa12.13□□□□□ -0.47
PNPT1-203ENST00000415489 C7P10643 843 aa12.12□□□□□ -0.47
PNPT1-203ENST00000415489 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
PNPT1-203ENST00000415489 IER5LQ5T953 404 aa12.11□□□□□ -0.47
PNPT1-203ENST00000415489 SOX12O15370 315 aa12.1□□□□□ -0.47
PNPT1-203ENST00000415489 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
PNPT1-203ENST00000415489 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
PNPT1-203ENST00000415489 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
PNPT1-203ENST00000415489 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
PNPT1-203ENST00000415489 POTEFA5A3E0 1075 aa12.06□□□□□ -0.48
PNPT1-203ENST00000415489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.488e-7■■■□□ 17.5
PNPT1-203ENST00000415489 COLQQ9Y215 455 aaPredicted RBP12.06□□□□□ -0.48
PNPT1-203ENST00000415489 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
PNPT1-203ENST00000415489 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
PNPT1-203ENST00000415489 OCEL1Q9H607 264 aa12.05□□□□□ -0.48
PNPT1-203ENST00000415489 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
PNPT1-203ENST00000415489 SEC24BO95487 1268 aa12.04□□□□□ -0.48
PNPT1-203ENST00000415489 NLRP6P59044 892 aa12.02□□□□□ -0.49
PNPT1-203ENST00000415489 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
PNPT1-203ENST00000415489 PLCG2P16885 1265 aa12□□□□□ -0.49
PNPT1-203ENST00000415489 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
PNPT1-203ENST00000415489 PDCD7Q8N8D1 485 aaKnown RBP11.99□□□□□ -0.49
PNPT1-203ENST00000415489 MS4A4AQ96JQ5 239 aa11.99□□□□□ -0.49
PNPT1-203ENST00000415489 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.99□□□□□ -0.49
PNPT1-203ENST00000415489 GTPBP6O43824 516 aaPredicted RBP11.98□□□□□ -0.49
PNPT1-203ENST00000415489 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
PNPT1-203ENST00000415489 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
PNPT1-203ENST00000415489 PPP1R37O75864 691 aa11.92□□□□□ -0.5
PNPT1-203ENST00000415489 PAXIP1Q6ZW49 1069 aaPredicted RBP11.92□□□□□ -0.5
PNPT1-203ENST00000415489 RYDENQ9NUL5 291 aaKnown RBP11.92□□□□□ -0.5
PNPT1-203ENST00000415489 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
PNPT1-203ENST00000415489 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
PNPT1-203ENST00000415489 L3MBTL3Q96JM7 780 aaPredicted RBP11.88□□□□□ -0.51
PNPT1-203ENST00000415489 LHX8Q68G74 356 aa11.85□□□□□ -0.51
PNPT1-203ENST00000415489 BOLA1Q9Y3E2 137 aa11.85□□□□□ -0.51
PNPT1-203ENST00000415489 TMEM121BQ9BXQ6 578 aaPredicted RBP11.82□□□□□ -0.52
PNPT1-203ENST00000415489 PLCB2Q00722 1185 aa11.81□□□□□ -0.52
PNPT1-203ENST00000415489 G3V3G9 751 aa11.8□□□□□ -0.52
PNPT1-203ENST00000415489 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
PNPT1-203ENST00000415489 MAMSTRQ6ZN01 415 aa11.75□□□□□ -0.53
PNPT1-203ENST00000415489 OTUD5Q96G74 571 aa11.73□□□□□ -0.53
PNPT1-203ENST00000415489 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.72□□□□□ -0.53
PNPT1-203ENST00000415489 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
PNPT1-203ENST00000415489 SCUBE2Q9NQ36 999 aa11.71□□□□□ -0.53
PNPT1-203ENST00000415489 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
PNPT1-203ENST00000415489 CADPS2Q86UW7 1296 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms