RNA–Protein interactions for RNA: ENST00000415283.1

LINC01066-201, Transcript of long intergenic non-protein coding RNA 1066, humanhuman

TSL 3 BASIC

Gene LINC01066, Length 399 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01066-201ENST00000415283 CLCN6P51797 869 aa14.45□□□□□ -0.1
LINC01066-201ENST00000415283 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
LINC01066-201ENST00000415283 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
LINC01066-201ENST00000415283 RB1CC1Q8TDY2 1594 aa14.39□□□□□ -0.11
LINC01066-201ENST00000415283 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
LINC01066-201ENST00000415283 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
LINC01066-201ENST00000415283 PHF12Q96QT6 1004 aa14.36□□□□□ -0.11
LINC01066-201ENST00000415283 ZBTB47Q9UFB7 747 aaPredicted RBP14.33□□□□□ -0.12
LINC01066-201ENST00000415283 DCBLD2Q96PD2 775 aa14.32□□□□□ -0.12
LINC01066-201ENST00000415283 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
LINC01066-201ENST00000415283 POTEIP0CG38 1075 aa14.24□□□□□ -0.13
LINC01066-201ENST00000415283 RASEFQ8IZ41 740 aa14.24□□□□□ -0.13
LINC01066-201ENST00000415283 CCDC61Q9Y6R9 512 aa14.2□□□□□ -0.14
LINC01066-201ENST00000415283 RSF1Q96T23 1441 aaPredicted RBP14.16□□□□□ -0.14
LINC01066-201ENST00000415283 VASPP50552 380 aaPredicted RBP14.16□□□□□ -0.14
LINC01066-201ENST00000415283 NUBP1P53384 320 aa14.16□□□□□ -0.14
LINC01066-201ENST00000415283 MS4A3Q96HJ5 214 aa14.16□□□□□ -0.14
LINC01066-201ENST00000415283 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
LINC01066-201ENST00000415283 KIF12Q96FN5 646 aa14.12□□□□□ -0.15
LINC01066-201ENST00000415283 UNC13AQ9UPW8 1703 aa14.12□□□□□ -0.15
LINC01066-201ENST00000415283 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
LINC01066-201ENST00000415283 LHX8Q68G74 356 aa14.1□□□□□ -0.15
LINC01066-201ENST00000415283 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
LINC01066-201ENST00000415283 MAP3K13O43283 966 aa14.07□□□□□ -0.16
LINC01066-201ENST00000415283 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
LINC01066-201ENST00000415283 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
LINC01066-201ENST00000415283 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
LINC01066-201ENST00000415283 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
LINC01066-201ENST00000415283 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
LINC01066-201ENST00000415283 ATMINO43313 823 aaPredicted RBP13.98□□□□□ -0.17
LINC01066-201ENST00000415283 ASTLQ6HA08 431 aaPredicted RBP13.98□□□□□ -0.17
LINC01066-201ENST00000415283 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
LINC01066-201ENST00000415283 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
LINC01066-201ENST00000415283 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
LINC01066-201ENST00000415283 PYGBP11216 843 aa13.92□□□□□ -0.18
LINC01066-201ENST00000415283 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
LINC01066-201ENST00000415283 GSE1Q14687 1217 aa13.91□□□□□ -0.18
LINC01066-201ENST00000415283 IFNLR1Q8IU57 520 aaPredicted RBP13.91□□□□□ -0.18
LINC01066-201ENST00000415283 BMP2KQ9NSY1 1161 aaPredicted RBP13.91□□□□□ -0.18
LINC01066-201ENST00000415283 WIZO95785 1651 aa13.91□□□□□ -0.18
LINC01066-201ENST00000415283 TIE1P35590 1138 aa13.9□□□□□ -0.18
LINC01066-201ENST00000415283 SLC39A7Q92504 469 aa13.9□□□□□ -0.18
LINC01066-201ENST00000415283 SMARCA4P51532 1647 aa13.9□□□□□ -0.19
LINC01066-201ENST00000415283 C7P10643 843 aa13.88□□□□□ -0.19
LINC01066-201ENST00000415283 IFNL1Q8IU54 200 aa13.88□□□□□ -0.19
LINC01066-201ENST00000415283 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
LINC01066-201ENST00000415283 METRNQ9UJH8 293 aa13.88□□□□□ -0.19
LINC01066-201ENST00000415283 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
LINC01066-201ENST00000415283 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
LINC01066-201ENST00000415283 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
LINC01066-201ENST00000415283 TMEM106CQ9BVX2 250 aa13.79□□□□□ -0.2
LINC01066-201ENST00000415283 TOP2AP11388 1531 aaKnown RBP13.79□□□□□ -0.2
LINC01066-201ENST00000415283 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
LINC01066-201ENST00000415283 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
LINC01066-201ENST00000415283 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
LINC01066-201ENST00000415283 SEC24BO95487 1268 aa13.74□□□□□ -0.21
LINC01066-201ENST00000415283 CHRM1P11229 460 aaPredicted RBP13.71□□□□□ -0.21
LINC01066-201ENST00000415283 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
LINC01066-201ENST00000415283 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
LINC01066-201ENST00000415283 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
LINC01066-201ENST00000415283 SMARCA2P51531 1590 aa13.67□□□□□ -0.22
LINC01066-201ENST00000415283 IER5LQ5T953 404 aa13.67□□□□□ -0.22
LINC01066-201ENST00000415283 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
LINC01066-201ENST00000415283 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.22
LINC01066-201ENST00000415283 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
LINC01066-201ENST00000415283 COLQQ9Y215 455 aaPredicted RBP13.64□□□□□ -0.23
LINC01066-201ENST00000415283 ATAD2BQ9ULI0 1458 aa13.62□□□□□ -0.23
LINC01066-201ENST00000415283 POTEJP0CG39 1038 aa13.62□□□□□ -0.23
LINC01066-201ENST00000415283 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
LINC01066-201ENST00000415283 PLCG2P16885 1265 aa13.59□□□□□ -0.23
LINC01066-201ENST00000415283 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
LINC01066-201ENST00000415283 PSEN1P49768 467 aa13.58□□□□□ -0.24
LINC01066-201ENST00000415283 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
LINC01066-201ENST00000415283 PDAP1Q13442 181 aaKnown RBP13.54□□□□□ -0.24
LINC01066-201ENST00000415283 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
LINC01066-201ENST00000415283 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
LINC01066-201ENST00000415283 MKRN3Q13064 507 aaKnown RBP13.52□□□□□ -0.25
LINC01066-201ENST00000415283 OCEL1Q9H607 264 aa13.51□□□□□ -0.25
LINC01066-201ENST00000415283 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
LINC01066-201ENST00000415283 HMGXB3Q12766 1538 aa13.47□□□□□ -0.25
LINC01066-201ENST00000415283 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
LINC01066-201ENST00000415283 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
LINC01066-201ENST00000415283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC01066-201ENST00000415283 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
LINC01066-201ENST00000415283 RIOK3O14730 519 aaKnown RBP13.39□□□□□ -0.27
LINC01066-201ENST00000415283 SLAIN1Q8ND83 568 aa13.37□□□□□ -0.27
LINC01066-201ENST00000415283 PDCD7Q8N8D1 485 aaKnown RBP13.36□□□□□ -0.27
LINC01066-201ENST00000415283 FAM163AQ96GL9 167 aaPredicted RBP13.35□□□□□ -0.27
LINC01066-201ENST00000415283 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
LINC01066-201ENST00000415283 L3MBTL3Q96JM7 780 aaPredicted RBP13.33□□□□□ -0.28
LINC01066-201ENST00000415283 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
LINC01066-201ENST00000415283 ECM2O94769 699 aaPredicted RBP13.31□□□□□ -0.28
LINC01066-201ENST00000415283 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
LINC01066-201ENST00000415283 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
LINC01066-201ENST00000415283 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
LINC01066-201ENST00000415283 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
LINC01066-201ENST00000415283 ZFP91Q96JP5 570 aaPredicted RBP13.29□□□□□ -0.28
LINC01066-201ENST00000415283 C3orf67Q6ZVT6 689 aa13.28□□□□□ -0.28
LINC01066-201ENST00000415283 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
LINC01066-201ENST00000415283 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms