RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.69■■□□□ 1.54
SHANK3-202ENST00000414786 DDX10Q13206 875 aaKnown RBP24.68■■□□□ 1.54
SHANK3-202ENST00000414786 HIRIP3Q9BW71 556 aaPredicted RBP24.68■■□□□ 1.54
SHANK3-202ENST00000414786 TMC1Q8TDI8 760 aa24.67■■□□□ 1.54
SHANK3-202ENST00000414786 CCDC136Q96JN2 1154 aa24.66■■□□□ 1.54
SHANK3-202ENST00000414786 ISY1Q9ULR0 285 aaKnown RBP24.64■■□□□ 1.53
SHANK3-202ENST00000414786 LAS1LQ9Y4W2 734 aaKnown RBP24.64■■□□□ 1.53
SHANK3-202ENST00000414786 NAP1L2Q9ULW6 460 aaPredicted RBP24.62■■□□□ 1.53
SHANK3-202ENST00000414786 ABCC9O60706 1549 aa24.62■■□□□ 1.53
SHANK3-202ENST00000414786 GLIPR1L2Q4G1C9 344 aa24.61■■□□□ 1.53
SHANK3-202ENST00000414786 PLCB2Q00722 1185 aa24.59■■□□□ 1.53
SHANK3-202ENST00000414786 ZRSR1Q15695 479 aaKnown RBP24.58■■□□□ 1.53
SHANK3-202ENST00000414786 PRM3Q9NNZ6 103 aa24.58■■□□□ 1.53
SHANK3-202ENST00000414786 ANO8Q9HCE9 1232 aaPredicted RBP24.56■■□□□ 1.52
SHANK3-202ENST00000414786 DNTTIP2Q5QJE6 756 aaKnown RBP24.53■■□□□ 1.52
SHANK3-202ENST00000414786 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
SHANK3-202ENST00000414786 PTMAP06454 111 aaKnown RBP24.52■■□□□ 1.52
SHANK3-202ENST00000414786 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.52■■□□□ 1.52
SHANK3-202ENST00000414786 TONSLQ96HA7 1378 aa24.51■■□□□ 1.51
SHANK3-202ENST00000414786 PDE4CQ08493 712 aa24.47■■□□□ 1.51
SHANK3-202ENST00000414786 SOX12O15370 315 aa24.46■■□□□ 1.51
SHANK3-202ENST00000414786 NEUROD2Q15784 382 aa24.45■■□□□ 1.5
SHANK3-202ENST00000414786 TRIM44Q96DX7 344 aaPredicted RBP24.44■■□□□ 1.5
SHANK3-202ENST00000414786 GOLGA2Q08379 1002 aa24.43■■□□□ 1.5
SHANK3-202ENST00000414786 RGL3Q3MIN7 710 aa24.39■■□□□ 1.5
SHANK3-202ENST00000414786 TNNT2P45379 298 aaPredicted RBP24.39■■□□□ 1.49
SHANK3-202ENST00000414786 ACIN1Q9UKV3 1341 aaKnown RBP24.37■■□□□ 1.49
SHANK3-202ENST00000414786 MRS2Q9HD23 443 aa24.37■■□□□ 1.49
SHANK3-202ENST00000414786 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
SHANK3-202ENST00000414786 OS9Q13438 667 aaPredicted RBP24.34■■□□□ 1.49
SHANK3-202ENST00000414786 FGD1P98174 961 aa24.33■■□□□ 1.49
SHANK3-202ENST00000414786 ERICH6BQ5W0A0 696 aa24.31■■□□□ 1.48
SHANK3-202ENST00000414786 RTN4Q9NQC3 1192 aaKnown RBP24.31■■□□□ 1.48
SHANK3-202ENST00000414786 FBXO3Q9UK99 471 aa24.3■■□□□ 1.48
SHANK3-202ENST00000414786 ZNF330Q9Y3S2 320 aaPredicted RBP24.24■■□□□ 1.47
SHANK3-202ENST00000414786 KCNJ4P48050 445 aa24.22■■□□□ 1.47
SHANK3-202ENST00000414786 FTSJ3Q8IY81 847 aaKnown RBP24.21■■□□□ 1.47
SHANK3-202ENST00000414786 MLECQ14165 292 aa24.19■■□□□ 1.46
SHANK3-202ENST00000414786 GOLGA6L22H0YM25 854 aa24.19■■□□□ 1.46
SHANK3-202ENST00000414786 CASC1Q6TDU7 716 aa24.19■■□□□ 1.46
SHANK3-202ENST00000414786 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
SHANK3-202ENST00000414786 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
SHANK3-202ENST00000414786 RRP7BPQ9NSQ0 103 aa24.15■■□□□ 1.46
SHANK3-202ENST00000414786 BECN1Q14457 450 aa24.14■■□□□ 1.46
SHANK3-202ENST00000414786 SPRYD3Q8NCJ5 442 aa24.14■■□□□ 1.46
SHANK3-202ENST00000414786 FRAT1Q92837 279 aaPredicted RBP24.13■■□□□ 1.45
SHANK3-202ENST00000414786 NAP1L5Q96NT1 182 aaPredicted RBP24.12■■□□□ 1.45
SHANK3-202ENST00000414786 CCDC9Q9Y3X0 531 aaKnown RBP24.1■■□□□ 1.45
SHANK3-202ENST00000414786 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
SHANK3-202ENST00000414786 ARID3AQ99856 593 aa24.1■■□□□ 1.45
SHANK3-202ENST00000414786 RGS3P49796 1198 aa24.08■■□□□ 1.44
SHANK3-202ENST00000414786 WWC1Q8IX03 1113 aa24.05■■□□□ 1.44
SHANK3-202ENST00000414786 U2SURPO15042 1029 aaKnown RBP24.05■■□□□ 1.44
SHANK3-202ENST00000414786 POGKQ9P215 609 aa24.05■■□□□ 1.44
SHANK3-202ENST00000414786 APBB1O00213 710 aa24.04■■□□□ 1.44
SHANK3-202ENST00000414786 SAFB2Q14151 953 aaKnown RBP eCLIP24.02■■□□□ 1.44
SHANK3-202ENST00000414786 KRI1Q8N9T8 703 aaKnown RBP23.99■■□□□ 1.43
SHANK3-202ENST00000414786 HSP90AB1P08238 724 aaKnown RBP23.99■■□□□ 1.43
SHANK3-202ENST00000414786 DRC7Q8IY82 874 aa23.98■■□□□ 1.43
SHANK3-202ENST00000414786 MAPK8IP3Q9UPT6 1336 aa23.98■■□□□ 1.43
SHANK3-202ENST00000414786 CFAP53Q96M91 514 aa23.98■■□□□ 1.43
SHANK3-202ENST00000414786 GNL2Q13823 731 aaKnown RBP23.96■■□□□ 1.43
SHANK3-202ENST00000414786 NOC3LQ8WTT2 800 aaKnown RBP23.95■■□□□ 1.42
SHANK3-202ENST00000414786 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.42
SHANK3-202ENST00000414786 CC2D1BQ5T0F9 858 aaKnown RBP23.94■■□□□ 1.42
SHANK3-202ENST00000414786 GOLGA6L6A8MZA4 724 aa23.93■■□□□ 1.42
SHANK3-202ENST00000414786 GOLGA6L4A6NEF3 574 aa23.93■■□□□ 1.42
SHANK3-202ENST00000414786 PAK3O75914 559 aaPredicted RBP23.92■■□□□ 1.42
SHANK3-202ENST00000414786 DDRGK1Q96HY6 314 aa23.9■■□□□ 1.42
SHANK3-202ENST00000414786 PNNQ9H307 717 aaKnown RBP23.9■■□□□ 1.42
SHANK3-202ENST00000414786 CREBRFQ8IUR6 639 aa23.9■■□□□ 1.42
SHANK3-202ENST00000414786 KNSTRNQ9Y448 316 aa23.89■■□□□ 1.42
SHANK3-202ENST00000414786 G3V3G9 751 aa23.87■■□□□ 1.41
SHANK3-202ENST00000414786 DCAF8Q5TAQ9 597 aa23.87■■□□□ 1.41
SHANK3-202ENST00000414786 CSB-PGBD3P0DP91 1061 aa23.83■■□□□ 1.4
SHANK3-202ENST00000414786 VPS53Q5VIR6 699 aa23.83■■□□□ 1.4
SHANK3-202ENST00000414786 CHMP3Q9Y3E7 222 aa23.81■■□□□ 1.4
SHANK3-202ENST00000414786 TMX4Q9H1E5 349 aaPredicted RBP23.8■■□□□ 1.4
SHANK3-202ENST00000414786 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
SHANK3-202ENST00000414786 STK26Q9P289 416 aa23.76■■□□□ 1.39
SHANK3-202ENST00000414786 EIF4G2P78344 907 aaKnown RBP eCLIP23.76■■□□□ 1.39
SHANK3-202ENST00000414786 KIAA2012Q0VF49 1180 aa23.76■■□□□ 1.39
SHANK3-202ENST00000414786 SUPT16HQ9Y5B9 1047 aaKnown RBP23.75■■□□□ 1.39
SHANK3-202ENST00000414786 MIER1Q8N108 512 aa23.75■■□□□ 1.39
SHANK3-202ENST00000414786 A0A0U1RQG5 324 aaPredicted RBP23.74■■□□□ 1.39
SHANK3-202ENST00000414786 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
SHANK3-202ENST00000414786 KLHL34Q8N239 644 aa23.73■■□□□ 1.39
SHANK3-202ENST00000414786 MSH5O43196 834 aa23.72■■□□□ 1.39
SHANK3-202ENST00000414786 NUDCQ9Y266 331 aa23.71■■□□□ 1.39
SHANK3-202ENST00000414786 SRPK2P78362 688 aaKnown RBP23.7■■□□□ 1.38
SHANK3-202ENST00000414786 NRDCO43847 1150 aa23.7■■□□□ 1.38
SHANK3-202ENST00000414786 CARD11Q9BXL7 1154 aa23.69■■□□□ 1.38
SHANK3-202ENST00000414786 RAD21O60216 631 aa23.66■■□□□ 1.38
SHANK3-202ENST00000414786 B4GALNT3Q6L9W6 998 aa23.65■■□□□ 1.38
SHANK3-202ENST00000414786 CNKSR2Q8WXI2 1034 aa23.64■■□□□ 1.38
SHANK3-202ENST00000414786 ANP32EQ9BTT0 268 aa23.64■■□□□ 1.38
SHANK3-202ENST00000414786 RASSF8Q8NHQ8 419 aa23.63■■□□□ 1.37
SHANK3-202ENST00000414786 RTF1Q92541 710 aaKnown RBP23.63■■□□□ 1.37
SHANK3-202ENST00000414786 CHAF1AQ13111 956 aaPredicted RBP23.62■■□□□ 1.37
SHANK3-202ENST00000414786 PLEKHD1A6NEE1 506 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms