RNA–Protein interactions for RNA: ENST00000414600.1

SOX9-AS1-202, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 742 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-202ENST00000414600 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
SOX9-AS1-202ENST00000414600 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
SOX9-AS1-202ENST00000414600 BCANQ96GW7 911 aa13.34□□□□□ -0.27
SOX9-AS1-202ENST00000414600 MYT1Q01538 1121 aa13.28□□□□□ -0.28
SOX9-AS1-202ENST00000414600 HOMEZQ8IX15 550 aa13.22□□□□□ -0.29
SOX9-AS1-202ENST00000414600 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
SOX9-AS1-202ENST00000414600 RANGAP1P46060 587 aaPredicted RBP13.2□□□□□ -0.3
SOX9-AS1-202ENST00000414600 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
SOX9-AS1-202ENST00000414600 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
SOX9-AS1-202ENST00000414600 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
SOX9-AS1-202ENST00000414600 ERICH6Q7L0X2 663 aa13.17□□□□□ -0.3
SOX9-AS1-202ENST00000414600 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
SOX9-AS1-202ENST00000414600 LCE2DQ5TA82 110 aaPredicted RBP13.14□□□□□ -0.31
SOX9-AS1-202ENST00000414600 METRNQ9UJH8 293 aa13.14□□□□□ -0.31
SOX9-AS1-202ENST00000414600 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
SOX9-AS1-202ENST00000414600 MAMSTRQ6ZN01 415 aa13.12□□□□□ -0.31
SOX9-AS1-202ENST00000414600 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
SOX9-AS1-202ENST00000414600 C7P10643 843 aa13.09□□□□□ -0.31
SOX9-AS1-202ENST00000414600 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
SOX9-AS1-202ENST00000414600 SLC39A7Q92504 469 aa13.09□□□□□ -0.31
SOX9-AS1-202ENST00000414600 ASTLQ6HA08 431 aaPredicted RBP13.07□□□□□ -0.32
SOX9-AS1-202ENST00000414600 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
SOX9-AS1-202ENST00000414600 ATMINO43313 823 aaPredicted RBP13.03□□□□□ -0.32
SOX9-AS1-202ENST00000414600 SCUBE2Q9NQ36 999 aa13.02□□□□□ -0.33
SOX9-AS1-202ENST00000414600 MS4A3Q96HJ5 214 aa12.99□□□□□ -0.33
SOX9-AS1-202ENST00000414600 NPM1P06748 294 aaKnown RBP eCLIP12.97□□□□□ -0.33
SOX9-AS1-202ENST00000414600 GTF3C3Q9Y5Q9 886 aa12.92□□□□□ -0.34
SOX9-AS1-202ENST00000414600 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
SOX9-AS1-202ENST00000414600 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
SOX9-AS1-202ENST00000414600 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
SOX9-AS1-202ENST00000414600 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
SOX9-AS1-202ENST00000414600 POTEFA5A3E0 1075 aa12.8□□□□□ -0.36
SOX9-AS1-202ENST00000414600 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
SOX9-AS1-202ENST00000414600 PODXL2Q9NZ53 605 aa12.78□□□□□ -0.36
SOX9-AS1-202ENST00000414600 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
SOX9-AS1-202ENST00000414600 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
SOX9-AS1-202ENST00000414600 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
SOX9-AS1-202ENST00000414600 KLHL34Q8N239 644 aa12.68□□□□□ -0.38
SOX9-AS1-202ENST00000414600 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
SOX9-AS1-202ENST00000414600 KIF12Q96FN5 646 aa12.66□□□□□ -0.38
SOX9-AS1-202ENST00000414600 SEC24BO95487 1268 aa12.65□□□□□ -0.38
SOX9-AS1-202ENST00000414600 MMRN1Q13201 1228 aa12.65□□□□□ -0.38
SOX9-AS1-202ENST00000414600 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
SOX9-AS1-202ENST00000414600 COLQQ9Y215 455 aaPredicted RBP12.65□□□□□ -0.38
SOX9-AS1-202ENST00000414600 ST18O60284 1047 aa12.63□□□□□ -0.39
SOX9-AS1-202ENST00000414600 TMEM132AQ24JP5 1023 aa12.63□□□□□ -0.39
SOX9-AS1-202ENST00000414600 TIE1P35590 1138 aa12.61□□□□□ -0.39
SOX9-AS1-202ENST00000414600 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
SOX9-AS1-202ENST00000414600 SLAIN1Q8ND83 568 aa12.57□□□□□ -0.4
SOX9-AS1-202ENST00000414600 FKBP8Q14318 412 aa12.56□□□□□ -0.4
SOX9-AS1-202ENST00000414600 MAP3K13O43283 966 aa12.55□□□□□ -0.4
SOX9-AS1-202ENST00000414600 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
SOX9-AS1-202ENST00000414600 TTLL13PA6NNM8 815 aa12.53□□□□□ -0.4
SOX9-AS1-202ENST00000414600 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
SOX9-AS1-202ENST00000414600 C14orf37Q86TY3 774 aa12.52□□□□□ -0.41
SOX9-AS1-202ENST00000414600 IER5LQ5T953 404 aa12.49□□□□□ -0.41
SOX9-AS1-202ENST00000414600 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.41
SOX9-AS1-202ENST00000414600 EIF5BO60841 1220 aaKnown RBP12.43□□□□□ -0.42
SOX9-AS1-202ENST00000414600 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
SOX9-AS1-202ENST00000414600 KDM2AQ9Y2K7 1162 aa12.43□□□□□ -0.42
SOX9-AS1-202ENST00000414600 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
SOX9-AS1-202ENST00000414600 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
SOX9-AS1-202ENST00000414600 PLCG2P16885 1265 aa12.33□□□□□ -0.44
SOX9-AS1-202ENST00000414600 SNPHO15079 494 aa12.32□□□□□ -0.44
SOX9-AS1-202ENST00000414600 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
SOX9-AS1-202ENST00000414600 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
SOX9-AS1-202ENST00000414600 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
SOX9-AS1-202ENST00000414600 TMEM106CQ9BVX2 250 aa12.25□□□□□ -0.45
SOX9-AS1-202ENST00000414600 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
SOX9-AS1-202ENST00000414600 TRIM26Q12899 539 aaPredicted RBP12.24□□□□□ -0.45
SOX9-AS1-202ENST00000414600 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
SOX9-AS1-202ENST00000414600 MIER1Q8N108 512 aa12.22□□□□□ -0.45
SOX9-AS1-202ENST00000414600 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
SOX9-AS1-202ENST00000414600 PROM2Q8N271 834 aa12.2□□□□□ -0.46
SOX9-AS1-202ENST00000414600 EMP3P54852 163 aa12.18□□□□□ -0.46
SOX9-AS1-202ENST00000414600 KRTAP3-3Q9BYR6 98 aa12.18□□□□□ -0.46
SOX9-AS1-202ENST00000414600 KRTAP3-2Q9BYR7 98 aa12.18□□□□□ -0.46
SOX9-AS1-202ENST00000414600 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
SOX9-AS1-202ENST00000414600 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
SOX9-AS1-202ENST00000414600 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
SOX9-AS1-202ENST00000414600 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
SOX9-AS1-202ENST00000414600 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
SOX9-AS1-202ENST00000414600 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
SOX9-AS1-202ENST00000414600 ABCC9O60706 1549 aa12.11□□□□□ -0.47
SOX9-AS1-202ENST00000414600 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
SOX9-AS1-202ENST00000414600 HRCP23327 699 aa12.09□□□□□ -0.47
SOX9-AS1-202ENST00000414600 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
SOX9-AS1-202ENST00000414600 NUBP1P53384 320 aa12.04□□□□□ -0.48
SOX9-AS1-202ENST00000414600 NBR1Q14596 966 aa12.02□□□□□ -0.49
SOX9-AS1-202ENST00000414600 CCDC180Q9P1Z9 1646 aa12.01□□□□□ -0.49
SOX9-AS1-202ENST00000414600 C3orf67Q6ZVT6 689 aa12.01□□□□□ -0.49
SOX9-AS1-202ENST00000414600 PLCD3Q8N3E9 789 aa12.01□□□□□ -0.49
SOX9-AS1-202ENST00000414600 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.99□□□□□ -0.49
SOX9-AS1-202ENST00000414600 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
SOX9-AS1-202ENST00000414600 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
SOX9-AS1-202ENST00000414600 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
SOX9-AS1-202ENST00000414600 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
SOX9-AS1-202ENST00000414600 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
SOX9-AS1-202ENST00000414600 RNF166Q96A37 237 aaPredicted RBP11.92□□□□□ -0.5
SOX9-AS1-202ENST00000414600 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms