RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 SPOCK2Q92563 424 aa16.41■□□□□ 0.22
ATG4C-204ENST00000414558 GABBR2O75899 941 aa16.37■□□□□ 0.21
ATG4C-204ENST00000414558 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
ATG4C-204ENST00000414558 PHF12Q96QT6 1004 aa16.35■□□□□ 0.21
ATG4C-204ENST00000414558 DCAF8Q5TAQ9 597 aa16.32■□□□□ 0.2
ATG4C-204ENST00000414558 GSE1Q14687 1217 aa16.29■□□□□ 0.2
ATG4C-204ENST00000414558 KIF12Q96FN5 646 aa16.23■□□□□ 0.19
ATG4C-204ENST00000414558 GALR2O43603 387 aaPredicted RBP16.19■□□□□ 0.18
ATG4C-204ENST00000414558 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
ATG4C-204ENST00000414558 MAP3K13O43283 966 aa16.16■□□□□ 0.18
ATG4C-204ENST00000414558 MS4A3Q96HJ5 214 aa16.16■□□□□ 0.18
ATG4C-204ENST00000414558 SGIP1Q9BQI5 828 aa16.14■□□□□ 0.17
ATG4C-204ENST00000414558 PYGBP11216 843 aa16.13■□□□□ 0.17
ATG4C-204ENST00000414558 PCDHB13Q9Y5F0 798 aa16.11■□□□□ 0.17
ATG4C-204ENST00000414558 DCBLD2Q96PD2 775 aa16.1■□□□□ 0.17
ATG4C-204ENST00000414558 CHRM1P11229 460 aaPredicted RBP16.08■□□□□ 0.16
ATG4C-204ENST00000414558 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
ATG4C-204ENST00000414558 IFNL1Q8IU54 200 aa16.01■□□□□ 0.15
ATG4C-204ENST00000414558 POTEIP0CG38 1075 aa15.99■□□□□ 0.15
ATG4C-204ENST00000414558 ZNF467Q7Z7K2 595 aaPredicted RBP15.97■□□□□ 0.15
ATG4C-204ENST00000414558 TIE1P35590 1138 aa15.95■□□□□ 0.14
ATG4C-204ENST00000414558 TRPC6Q9Y210 931 aa15.94■□□□□ 0.14
ATG4C-204ENST00000414558 ASTLQ6HA08 431 aaPredicted RBP15.93■□□□□ 0.14
ATG4C-204ENST00000414558 PCDHB8Q9UN66 801 aa15.93■□□□□ 0.14
ATG4C-204ENST00000414558 BMP2KQ9NSY1 1161 aaPredicted RBP15.91■□□□□ 0.14
ATG4C-204ENST00000414558 ATMINO43313 823 aaPredicted RBP15.9■□□□□ 0.14
ATG4C-204ENST00000414558 TTLL13PA6NNM8 815 aa15.85■□□□□ 0.13
ATG4C-204ENST00000414558 ECM2O94769 699 aaPredicted RBP15.84■□□□□ 0.13
ATG4C-204ENST00000414558 PKD2Q13563 968 aa15.84■□□□□ 0.13
ATG4C-204ENST00000414558 TMEM106CQ9BVX2 250 aa15.84■□□□□ 0.13
ATG4C-204ENST00000414558 ATN1P54259 1190 aaPredicted RBP15.83■□□□□ 0.12
ATG4C-204ENST00000414558 PDAP1Q13442 181 aaKnown RBP15.8■□□□□ 0.12
ATG4C-204ENST00000414558 PELP1Q8IZL8 1130 aaKnown RBP15.8■□□□□ 0.12
ATG4C-204ENST00000414558 RIOK3O14730 519 aaKnown RBP15.78■□□□□ 0.12
ATG4C-204ENST00000414558 PSEN1P49768 467 aa15.77■□□□□ 0.12
ATG4C-204ENST00000414558 SLC39A7Q92504 469 aa15.77■□□□□ 0.12
ATG4C-204ENST00000414558 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
ATG4C-204ENST00000414558 RNF25Q96BH1 459 aaPredicted RBP15.75■□□□□ 0.11
ATG4C-204ENST00000414558 C7P10643 843 aa15.74■□□□□ 0.11
ATG4C-204ENST00000414558 METRNQ9UJH8 293 aa15.71■□□□□ 0.11
ATG4C-204ENST00000414558 TAOK2Q9UL54 1235 aa15.71■□□□□ 0.11
ATG4C-204ENST00000414558 VGFO15240 615 aaPredicted RBP15.69■□□□□ 0.1
ATG4C-204ENST00000414558 IER5LQ5T953 404 aa15.68■□□□□ 0.1
ATG4C-204ENST00000414558 RGL2O15211 777 aa15.65■□□□□ 0.1
ATG4C-204ENST00000414558 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
ATG4C-204ENST00000414558 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.6■□□□□ 0.09
ATG4C-204ENST00000414558 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
ATG4C-204ENST00000414558 SEC24BO95487 1268 aa15.59■□□□□ 0.09
ATG4C-204ENST00000414558 MKRN3Q13064 507 aaKnown RBP15.59■□□□□ 0.09
ATG4C-204ENST00000414558 LHX8Q68G74 356 aa15.59■□□□□ 0.09
ATG4C-204ENST00000414558 CABP2Q9NPB3 220 aa15.58■□□□□ 0.08
ATG4C-204ENST00000414558 AMER1Q5JTC6 1135 aaPredicted RBP15.55■□□□□ 0.08
ATG4C-204ENST00000414558 PLCG2P16885 1265 aa15.53■□□□□ 0.08
ATG4C-204ENST00000414558 IRX5P78411 483 aaPredicted RBP15.52■□□□□ 0.08
ATG4C-204ENST00000414558 COLQQ9Y215 455 aaPredicted RBP15.52■□□□□ 0.08
ATG4C-204ENST00000414558 POTEFA5A3E0 1075 aa15.51■□□□□ 0.07
ATG4C-204ENST00000414558 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
ATG4C-204ENST00000414558 STK25O00506 426 aa15.49■□□□□ 0.07
ATG4C-204ENST00000414558 OCEL1Q9H607 264 aa15.49■□□□□ 0.07
ATG4C-204ENST00000414558 POTEB2H3BUK9 544 aa15.47■□□□□ 0.07
ATG4C-204ENST00000414558 STK24Q9Y6E0 443 aa15.47■□□□□ 0.07
ATG4C-204ENST00000414558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.07
ATG4C-204ENST00000414558 EFCAB3Q8N7B9 438 aa15.45■□□□□ 0.06
ATG4C-204ENST00000414558 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
ATG4C-204ENST00000414558 SOX12O15370 315 aa15.39■□□□□ 0.05
ATG4C-204ENST00000414558 MAMSTRQ6ZN01 415 aa15.39■□□□□ 0.05
ATG4C-204ENST00000414558 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
ATG4C-204ENST00000414558 PDCD7Q8N8D1 485 aaKnown RBP15.39■□□□□ 0.05
ATG4C-204ENST00000414558 HS6ST3Q8IZP7 471 aa15.37■□□□□ 0.05
ATG4C-204ENST00000414558 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
ATG4C-204ENST00000414558 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
ATG4C-204ENST00000414558 CHGAP10645 457 aaKnown RBP15.34■□□□□ 0.05
ATG4C-204ENST00000414558 SCUBE2Q9NQ36 999 aa15.33■□□□□ 0.04
ATG4C-204ENST00000414558 OTUD5Q96G74 571 aa15.31■□□□□ 0.04
ATG4C-204ENST00000414558 L3MBTL3Q96JM7 780 aaPredicted RBP15.31■□□□□ 0.04
ATG4C-204ENST00000414558 NLRP6P59044 892 aa15.29■□□□□ 0.04
ATG4C-204ENST00000414558 PHF8Q9UPP1 1060 aa15.29■□□□□ 0.04
ATG4C-204ENST00000414558 DPY19L2Q6NUT2 758 aa15.25■□□□□ 0.03
ATG4C-204ENST00000414558 MFRPQ9BY79 579 aa15.24■□□□□ 0.03
ATG4C-204ENST00000414558 G3V3G9 751 aa15.23■□□□□ 0.03
ATG4C-204ENST00000414558 FBXO22Q8NEZ5 403 aa15.22■□□□□ 0.03
ATG4C-204ENST00000414558 MS4A4AQ96JQ5 239 aa15.21■□□□□ 0.03
ATG4C-204ENST00000414558 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
ATG4C-204ENST00000414558 BOLA1Q9Y3E2 137 aa15.21■□□□□ 0.03
ATG4C-204ENST00000414558 C3orf67Q6ZVT6 689 aa15.18■□□□□ 0.02
ATG4C-204ENST00000414558 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.18■□□□□ 0.02
ATG4C-204ENST00000414558 TMEM121BQ9BXQ6 578 aaPredicted RBP15.12■□□□□ 0.01
ATG4C-204ENST00000414558 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
ATG4C-204ENST00000414558 RYDENQ9NUL5 291 aaKnown RBP15.11■□□□□ 0.01
ATG4C-204ENST00000414558 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
ATG4C-204ENST00000414558 MICALL2Q8IY33 904 aa15.09■□□□□ 0.01
ATG4C-204ENST00000414558 BBXQ8WY36 941 aaPredicted RBP14.99□□□□□ -0.01
ATG4C-204ENST00000414558 PPP1R37O75864 691 aa14.98□□□□□ -0.01
ATG4C-204ENST00000414558 GTPBP6O43824 516 aaPredicted RBP14.95□□□□□ -0.02
ATG4C-204ENST00000414558 SNPHO15079 494 aa14.91□□□□□ -0.02
ATG4C-204ENST00000414558 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.9□□□□□ -0.02
ATG4C-204ENST00000414558 TMEM92Q6UXU6 159 aa14.88□□□□□ -0.03
ATG4C-204ENST00000414558 FAM163AQ96GL9 167 aaPredicted RBP14.84□□□□□ -0.03
ATG4C-204ENST00000414558 TMC2Q8TDI7 906 aa14.81□□□□□ -0.04
ATG4C-204ENST00000414558 SPRYD3Q8NCJ5 442 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms