RNA–Protein interactions for RNA: ENST00000414277.1

HMCN1-202, Transcript of hemicentin 1, humanhuman

TSL 3

Gene HMCN1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-202ENST00000414277 FAM163AQ96GL9 167 aaPredicted RBP8.97□□□□□ -0.97
HMCN1-202ENST00000414277 SCUBE2Q9NQ36 999 aa8.95□□□□□ -0.98
HMCN1-202ENST00000414277 STAG3Q9UJ98 1225 aa8.94□□□□□ -0.98
HMCN1-202ENST00000414277 ATMINO43313 823 aaPredicted RBP8.93□□□□□ -0.98
HMCN1-202ENST00000414277 MS4A3Q96HJ5 214 aa8.89□□□□□ -0.99
HMCN1-202ENST00000414277 NPM1P06748 294 aaKnown RBP eCLIP8.87□□□□□ -0.99
HMCN1-202ENST00000414277 CDAN1Q8IWY9 1227 aa8.87□□□□□ -0.99
HMCN1-202ENST00000414277 MNX1P50219 401 aaPredicted RBP8.79□□□□□ -1
HMCN1-202ENST00000414277 ATN1P54259 1190 aaPredicted RBP8.79□□□□□ -1
HMCN1-202ENST00000414277 POTEFA5A3E0 1075 aa8.76□□□□□ -1.01
HMCN1-202ENST00000414277 MMRN1Q13201 1228 aa8.71□□□□□ -1.02
HMCN1-202ENST00000414277 BMP2KQ9NSY1 1161 aaPredicted RBP8.7□□□□□ -1.02
HMCN1-202ENST00000414277 CCDC61Q9Y6R9 512 aa8.67□□□□□ -1.02
HMCN1-202ENST00000414277 ST18O60284 1047 aa8.66□□□□□ -1.02
HMCN1-202ENST00000414277 TIE1P35590 1138 aa8.66□□□□□ -1.02
HMCN1-202ENST00000414277 SPNS2Q8IVW8 549 aa8.66□□□□□ -1.02
HMCN1-202ENST00000414277 KIF12Q96FN5 646 aa8.65□□□□□ -1.02
HMCN1-202ENST00000414277 TSPYL2Q9H2G4 693 aaPredicted RBP8.65□□□□□ -1.02
HMCN1-202ENST00000414277 SEC24BO95487 1268 aa8.64□□□□□ -1.03
HMCN1-202ENST00000414277 COLQQ9Y215 455 aaPredicted RBP8.63□□□□□ -1.03
HMCN1-202ENST00000414277 TRPC6Q9Y210 931 aa8.62□□□□□ -1.03
HMCN1-202ENST00000414277 SPDYE4A6NLX3 237 aa8.61□□□□□ -1.03
HMCN1-202ENST00000414277 SLAIN1Q8ND83 568 aa8.6□□□□□ -1.03
HMCN1-202ENST00000414277 IER5LQ5T953 404 aa8.59□□□□□ -1.03
HMCN1-202ENST00000414277 TTLL13PA6NNM8 815 aa8.57□□□□□ -1.04
HMCN1-202ENST00000414277 TMEM121BQ9BXQ6 578 aaPredicted RBP8.57□□□□□ -1.04
HMCN1-202ENST00000414277 MAP3K13O43283 966 aa8.55□□□□□ -1.04
HMCN1-202ENST00000414277 TRIM35Q9UPQ4 493 aa8.52□□□□□ -1.05
HMCN1-202ENST00000414277 SNPHO15079 494 aa8.47□□□□□ -1.05
HMCN1-202ENST00000414277 SGIP1Q9BQI5 828 aa8.46□□□□□ -1.06
HMCN1-202ENST00000414277 PLCG2P16885 1265 aa8.44□□□□□ -1.06
HMCN1-202ENST00000414277 MARVELD3Q96A59 401 aa8.42□□□□□ -1.06
HMCN1-202ENST00000414277 RASEFQ8IZ41 740 aa8.4□□□□□ -1.06
HMCN1-202ENST00000414277 PCDHB13Q9Y5F0 798 aa8.39□□□□□ -1.07
HMCN1-202ENST00000414277 IRX5P78411 483 aaPredicted RBP8.38□□□□□ -1.07
HMCN1-202ENST00000414277 PLEKHG5O94827 1062 aa8.37□□□□□ -1.07
HMCN1-202ENST00000414277 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
HMCN1-202ENST00000414277 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
HMCN1-202ENST00000414277 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.37□□□□□ -1.07
HMCN1-202ENST00000414277 EMP3P54852 163 aa8.35□□□□□ -1.07
HMCN1-202ENST00000414277 TMEM106CQ9BVX2 250 aa8.35□□□□□ -1.07
HMCN1-202ENST00000414277 PROM2Q8N271 834 aa8.33□□□□□ -1.08
HMCN1-202ENST00000414277 IFNL1Q8IU54 200 aa8.32□□□□□ -1.08
HMCN1-202ENST00000414277 HS3ST6Q96QI5 342 aa8.32□□□□□ -1.08
HMCN1-202ENST00000414277 OCEL1Q9H607 264 aa8.31□□□□□ -1.08
HMCN1-202ENST00000414277 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
HMCN1-202ENST00000414277 FAM205CA6NFA0 338 aa8.27□□□□□ -1.09
HMCN1-202ENST00000414277 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
HMCN1-202ENST00000414277 MIER1Q8N108 512 aa8.26□□□□□ -1.09
HMCN1-202ENST00000414277 CSRNP3Q8WYN3 585 aa8.23□□□□□ -1.09
HMCN1-202ENST00000414277 C3orf67Q6ZVT6 689 aa8.22□□□□□ -1.09
HMCN1-202ENST00000414277 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.1
HMCN1-202ENST00000414277 NUBP1P53384 320 aa8.19□□□□□ -1.1
HMCN1-202ENST00000414277 ZBTB47Q9UFB7 747 aaPredicted RBP8.18□□□□□ -1.1
HMCN1-202ENST00000414277 FAM212AQ96EL1 285 aa8.17□□□□□ -1.1
HMCN1-202ENST00000414277 PDCD7Q8N8D1 485 aaKnown RBP8.15□□□□□ -1.1
HMCN1-202ENST00000414277 L3MBTL3Q96JM7 780 aaPredicted RBP8.15□□□□□ -1.1
HMCN1-202ENST00000414277 PLCD3Q8N3E9 789 aa8.14□□□□□ -1.11
HMCN1-202ENST00000414277 MYT1LQ9UL68 1186 aa8.1□□□□□ -1.11
HMCN1-202ENST00000414277 HOXB1P14653 301 aaPredicted RBP8.07□□□□□ -1.12
HMCN1-202ENST00000414277 ERBB3P21860 1342 aa8.05□□□□□ -1.12
HMCN1-202ENST00000414277 HOXB3P14651 431 aaPredicted RBP8.05□□□□□ -1.12
HMCN1-202ENST00000414277 MKRN3Q13064 507 aaKnown RBP8.05□□□□□ -1.12
HMCN1-202ENST00000414277 PTGER2P43116 358 aa8.04□□□□□ -1.12
HMCN1-202ENST00000414277 GOLGA2Q08379 1002 aa8.04□□□□□ -1.12
HMCN1-202ENST00000414277 PCDHB8Q9UN66 801 aa8.04□□□□□ -1.12
HMCN1-202ENST00000414277 PYGBP11216 843 aa8.03□□□□□ -1.12
HMCN1-202ENST00000414277 ZNF710Q8N1W2 664 aa8.02□□□□□ -1.13
HMCN1-202ENST00000414277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.01□□□□□ -1.13
HMCN1-202ENST00000414277 DOK7Q18PE1 504 aa8□□□□□ -1.13
HMCN1-202ENST00000414277 VARS2Q5ST30 1063 aaKnown RBP7.97□□□□□ -1.13
HMCN1-202ENST00000414277 DCAF8Q5TAQ9 597 aa7.97□□□□□ -1.13
HMCN1-202ENST00000414277 ILDR1Q86SU0 546 aaPredicted RBP7.96□□□□□ -1.14
HMCN1-202ENST00000414277 G3V3G9 751 aa7.95□□□□□ -1.14
HMCN1-202ENST00000414277 RIMBP2O15034 1052 aa7.95□□□□□ -1.14
HMCN1-202ENST00000414277 ZNF467Q7Z7K2 595 aaPredicted RBP7.95□□□□□ -1.14
HMCN1-202ENST00000414277 ZNF687Q8N1G0 1237 aa7.95□□□□□ -1.14
HMCN1-202ENST00000414277 BOLA1Q9Y3E2 137 aa7.92□□□□□ -1.14
HMCN1-202ENST00000414277 DPY19L2Q6NUT2 758 aa7.89□□□□□ -1.15
HMCN1-202ENST00000414277 ZSWIM6Q9HCJ5 1215 aa7.89□□□□□ -1.15
HMCN1-202ENST00000414277 PSEN1P49768 467 aa7.87□□□□□ -1.15
HMCN1-202ENST00000414277 PLA2G2EQ9NZK7 142 aa7.87□□□□□ -1.15
HMCN1-202ENST00000414277 ANKRD13DQ6ZTN6 518 aa7.83□□□□□ -1.16
HMCN1-202ENST00000414277 GSE1Q14687 1217 aa7.82□□□□□ -1.16
HMCN1-202ENST00000414277 CHRM1P11229 460 aaPredicted RBP7.81□□□□□ -1.16
HMCN1-202ENST00000414277 GPR153Q6NV75 609 aa7.8□□□□□ -1.16
HMCN1-202ENST00000414277 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
HMCN1-202ENST00000414277 PDAP1Q13442 181 aaKnown RBP7.79□□□□□ -1.16
HMCN1-202ENST00000414277 CABP2Q9NPB3 220 aa7.78□□□□□ -1.16
HMCN1-202ENST00000414277 HCSTQ9UBK5 93 aa7.78□□□□□ -1.16
HMCN1-202ENST00000414277 EHMT2Q96KQ7 1210 aa7.77□□□□□ -1.17
HMCN1-202ENST00000414277 ZNF316A6NFI3 1004 aaPredicted RBP7.73□□□□□ -1.17
HMCN1-202ENST00000414277 PBX2P40425 430 aa7.72□□□□□ -1.17
HMCN1-202ENST00000414277 TMEM92Q6UXU6 159 aa7.71□□□□□ -1.18
HMCN1-202ENST00000414277 ARSIQ5FYB1 569 aa7.69□□□□□ -1.18
HMCN1-202ENST00000414277 MICALL2Q8IY33 904 aa7.68□□□□□ -1.18
HMCN1-202ENST00000414277 RGS20O76081 388 aa7.66□□□□□ -1.18
HMCN1-202ENST00000414277 IRX2Q9BZI1 471 aaPredicted RBP7.64□□□□□ -1.19
HMCN1-202ENST00000414277 KLHL34Q8N239 644 aa7.62□□□□□ -1.19
HMCN1-202ENST00000414277 KHSRPQ92945 711 aaKnown RBP eCLIP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms