RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TSPYL2Q9H2G4 693 aaPredicted RBP10.2□□□□□ -0.78
HMGB1P11-201ENST00000413899 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
HMGB1P11-201ENST00000413899 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
HMGB1P11-201ENST00000413899 C19orf67A6NJJ6 358 aa10.16□□□□□ -0.78
HMGB1P11-201ENST00000413899 RNF25Q96BH1 459 aaPredicted RBP10.16□□□□□ -0.78
HMGB1P11-201ENST00000413899 PYGBP11216 843 aa10.14□□□□□ -0.79
HMGB1P11-201ENST00000413899 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
HMGB1P11-201ENST00000413899 RIOK3O14730 519 aaKnown RBP10.12□□□□□ -0.79
HMGB1P11-201ENST00000413899 DCAF8L2P0C7V8 631 aa10.12□□□□□ -0.79
HMGB1P11-201ENST00000413899 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
HMGB1P11-201ENST00000413899 TAOK2Q9UL54 1235 aa10.1□□□□□ -0.79
HMGB1P11-201ENST00000413899 SGIP1Q9BQI5 828 aa10.08□□□□□ -0.8
HMGB1P11-201ENST00000413899 VGFO15240 615 aaPredicted RBP10.07□□□□□ -0.8
HMGB1P11-201ENST00000413899 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
HMGB1P11-201ENST00000413899 ZNF467Q7Z7K2 595 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P11-201ENST00000413899 KIF12Q96FN5 646 aa10.06□□□□□ -0.8
HMGB1P11-201ENST00000413899 HS6ST3Q8IZP7 471 aa10.04□□□□□ -0.8
HMGB1P11-201ENST00000413899 POTEHQ6S545 545 aa10.03□□□□□ -0.8
HMGB1P11-201ENST00000413899 PHF12Q96QT6 1004 aa10.03□□□□□ -0.8
HMGB1P11-201ENST00000413899 HAX1O00165 279 aa10.02□□□□□ -0.81
HMGB1P11-201ENST00000413899 MAP3K13O43283 966 aa10.02□□□□□ -0.81
HMGB1P11-201ENST00000413899 CHGAP10645 457 aaKnown RBP10.01□□□□□ -0.81
HMGB1P11-201ENST00000413899 BBXQ8WY36 941 aaPredicted RBP10.01□□□□□ -0.81
HMGB1P11-201ENST00000413899 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
HMGB1P11-201ENST00000413899 PCDHB13Q9Y5F0 798 aa10.01□□□□□ -0.81
HMGB1P11-201ENST00000413899 IFNL1Q8IU54 200 aa10□□□□□ -0.81
HMGB1P11-201ENST00000413899 PCDHB8Q9UN66 801 aa9.99□□□□□ -0.81
HMGB1P11-201ENST00000413899 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.98□□□□□ -0.81
HMGB1P11-201ENST00000413899 PDAP1Q13442 181 aaKnown RBP9.98□□□□□ -0.81
HMGB1P11-201ENST00000413899 ZFP91Q96JP5 570 aaPredicted RBP9.98□□□□□ -0.81
HMGB1P11-201ENST00000413899 CLCN6P51797 869 aa9.96□□□□□ -0.82
HMGB1P11-201ENST00000413899 EVX2Q03828 476 aa9.96□□□□□ -0.82
HMGB1P11-201ENST00000413899 STK25O00506 426 aa9.95□□□□□ -0.82
HMGB1P11-201ENST00000413899 PSEN1P49768 467 aa9.94□□□□□ -0.82
HMGB1P11-201ENST00000413899 PLCB2Q00722 1185 aa9.93□□□□□ -0.82
HMGB1P11-201ENST00000413899 BCL11BQ9C0K0 894 aaPredicted RBP9.93□□□□□ -0.82
HMGB1P11-201ENST00000413899 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.93□□□□□ -0.82
HMGB1P11-201ENST00000413899 MS4A3Q96HJ5 214 aa9.92□□□□□ -0.82
HMGB1P11-201ENST00000413899 STK24Q9Y6E0 443 aa9.9□□□□□ -0.82
HMGB1P11-201ENST00000413899 SLC24A1O60721 1099 aa9.87□□□□□ -0.83
HMGB1P11-201ENST00000413899 NKX1-1Q15270 411 aaPredicted RBP9.87□□□□□ -0.83
HMGB1P11-201ENST00000413899 GALR2O43603 387 aaPredicted RBP9.84□□□□□ -0.83
HMGB1P11-201ENST00000413899 TIE1P35590 1138 aa9.84□□□□□ -0.83
HMGB1P11-201ENST00000413899 SPRYD3Q8NCJ5 442 aa9.84□□□□□ -0.83
HMGB1P11-201ENST00000413899 TRPC6Q9Y210 931 aa9.84□□□□□ -0.83
HMGB1P11-201ENST00000413899 PAXIP1Q6ZW49 1069 aaPredicted RBP9.82□□□□□ -0.84
HMGB1P11-201ENST00000413899 TMEM106CQ9BVX2 250 aa9.82□□□□□ -0.84
HMGB1P11-201ENST00000413899 GTPBP6O43824 516 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P11-201ENST00000413899 GABBR2O75899 941 aa9.8□□□□□ -0.84
HMGB1P11-201ENST00000413899 BMP2KQ9NSY1 1161 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P11-201ENST00000413899 RYDENQ9NUL5 291 aaKnown RBP9.8□□□□□ -0.84
HMGB1P11-201ENST00000413899 TTLL13PA6NNM8 815 aa9.79□□□□□ -0.84
HMGB1P11-201ENST00000413899 CFAP44Q96MT7 982 aa9.79□□□□□ -0.84
HMGB1P11-201ENST00000413899 CABP2Q9NPB3 220 aa9.79□□□□□ -0.84
HMGB1P11-201ENST00000413899 SOX12O15370 315 aa9.77□□□□□ -0.85
HMGB1P11-201ENST00000413899 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
HMGB1P11-201ENST00000413899 ASTLQ6HA08 431 aaPredicted RBP9.74□□□□□ -0.85
HMGB1P11-201ENST00000413899 SP7Q8TDD2 431 aaPredicted RBP9.74□□□□□ -0.85
HMGB1P11-201ENST00000413899 MFRPQ9BY79 579 aa9.74□□□□□ -0.85
HMGB1P11-201ENST00000413899 ATMINO43313 823 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P11-201ENST00000413899 GOLGA2Q08379 1002 aa9.72□□□□□ -0.85
HMGB1P11-201ENST00000413899 FBXO22Q8NEZ5 403 aa9.72□□□□□ -0.85
HMGB1P11-201ENST00000413899 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P11-201ENST00000413899 NLRP6P59044 892 aa9.71□□□□□ -0.86
HMGB1P11-201ENST00000413899 ILDR1Q86SU0 546 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P11-201ENST00000413899 TRIM35Q9UPQ4 493 aa9.7□□□□□ -0.86
HMGB1P11-201ENST00000413899 ATN1P54259 1190 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P11-201ENST00000413899 MKRN3Q13064 507 aaKnown RBP9.69□□□□□ -0.86
HMGB1P11-201ENST00000413899 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
HMGB1P11-201ENST00000413899 IER5LQ5T953 404 aa9.66□□□□□ -0.86
HMGB1P11-201ENST00000413899 DCBLD2Q96PD2 775 aa9.66□□□□□ -0.86
HMGB1P11-201ENST00000413899 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
HMGB1P11-201ENST00000413899 VSIG10Q8N0Z9 540 aa9.65□□□□□ -0.86
HMGB1P11-201ENST00000413899 MS4A4AQ96JQ5 239 aa9.65□□□□□ -0.86
HMGB1P11-201ENST00000413899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.62□□□□□ -0.87
HMGB1P11-201ENST00000413899 IRX5P78411 483 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P11-201ENST00000413899 PPP1R37O75864 691 aa9.6□□□□□ -0.87
HMGB1P11-201ENST00000413899 POTEIP0CG38 1075 aa9.6□□□□□ -0.87
HMGB1P11-201ENST00000413899 PELP1Q8IZL8 1130 aaKnown RBP9.6□□□□□ -0.87
HMGB1P11-201ENST00000413899 PDCD7Q8N8D1 485 aaKnown RBP9.58□□□□□ -0.88
HMGB1P11-201ENST00000413899 OCEL1Q9H607 264 aa9.58□□□□□ -0.88
HMGB1P11-201ENST00000413899 KDM2AQ9Y2K7 1162 aa9.58□□□□□ -0.88
HMGB1P11-201ENST00000413899 SLC39A7Q92504 469 aa9.57□□□□□ -0.88
HMGB1P11-201ENST00000413899 C7P10643 843 aa9.56□□□□□ -0.88
HMGB1P11-201ENST00000413899 PLCG2P16885 1265 aa9.53□□□□□ -0.88
HMGB1P11-201ENST00000413899 CADPS2Q86UW7 1296 aa9.52□□□□□ -0.89
HMGB1P11-201ENST00000413899 DPY19L2Q6NUT2 758 aa9.51□□□□□ -0.89
HMGB1P11-201ENST00000413899 METRNQ9UJH8 293 aa9.51□□□□□ -0.89
HMGB1P11-201ENST00000413899 COLQQ9Y215 455 aaPredicted RBP9.51□□□□□ -0.89
HMGB1P11-201ENST00000413899 POTEFA5A3E0 1075 aa9.49□□□□□ -0.89
HMGB1P11-201ENST00000413899 SEC24BO95487 1268 aa9.49□□□□□ -0.89
HMGB1P11-201ENST00000413899 TMEM121BQ9BXQ6 578 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P11-201ENST00000413899 MICALL2Q8IY33 904 aa9.47□□□□□ -0.89
HMGB1P11-201ENST00000413899 L3MBTL3Q96JM7 780 aaPredicted RBP9.47□□□□□ -0.89
HMGB1P11-201ENST00000413899 BOLA1Q9Y3E2 137 aa9.47□□□□□ -0.89
HMGB1P11-201ENST00000413899 NCKAP5LQ9HCH0 1330 aa9.43□□□□□ -0.9
HMGB1P11-201ENST00000413899 CRISPLD2Q9H0B8 497 aa9.43□□□□□ -0.9
HMGB1P11-201ENST00000413899 G3V3G9 751 aa9.41□□□□□ -0.9
HMGB1P11-201ENST00000413899 PDE4AP27815 886 aa9.41□□□□□ -0.9
HMGB1P11-201ENST00000413899 MFSD10Q14728 455 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms