RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 MNX1P50219 401 aaPredicted RBP12.13□□□□□ -0.47
NOD1-203ENST00000413433 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
NOD1-203ENST00000413433 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
NOD1-203ENST00000413433 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
NOD1-203ENST00000413433 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
NOD1-203ENST00000413433 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
NOD1-203ENST00000413433 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
NOD1-203ENST00000413433 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
NOD1-203ENST00000413433 C7P10643 843 aa12.07□□□□□ -0.48
NOD1-203ENST00000413433 MS4A3Q96HJ5 214 aa12.07□□□□□ -0.48
NOD1-203ENST00000413433 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
NOD1-203ENST00000413433 PCDH10Q9P2E7 1040 aa12.06□□□□□ -0.48
NOD1-203ENST00000413433 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
NOD1-203ENST00000413433 PROM2Q8N271 834 aa12.04□□□□□ -0.48
NOD1-203ENST00000413433 HAP1P54257 671 aaPredicted RBP12□□□□□ -0.49
NOD1-203ENST00000413433 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
NOD1-203ENST00000413433 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
NOD1-203ENST00000413433 SCUBE2Q9NQ36 999 aa11.95□□□□□ -0.5
NOD1-203ENST00000413433 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
NOD1-203ENST00000413433 ATN1P54259 1190 aaPredicted RBP11.91□□□□□ -0.5
NOD1-203ENST00000413433 BCANQ96GW7 911 aa11.91□□□□□ -0.5
NOD1-203ENST00000413433 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
NOD1-203ENST00000413433 VASPP50552 380 aaPredicted RBP11.9□□□□□ -0.5
NOD1-203ENST00000413433 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
NOD1-203ENST00000413433 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
NOD1-203ENST00000413433 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
NOD1-203ENST00000413433 BMP2KQ9NSY1 1161 aaPredicted RBP11.82□□□□□ -0.52
NOD1-203ENST00000413433 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
NOD1-203ENST00000413433 TIE1P35590 1138 aa11.81□□□□□ -0.52
NOD1-203ENST00000413433 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
NOD1-203ENST00000413433 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
NOD1-203ENST00000413433 MAP3K13O43283 966 aa11.76□□□□□ -0.53
NOD1-203ENST00000413433 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
NOD1-203ENST00000413433 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
NOD1-203ENST00000413433 SEC24BO95487 1268 aa11.74□□□□□ -0.53
NOD1-203ENST00000413433 PRKCSHP14314 528 aaPredicted RBP11.71□□□□□ -0.53
NOD1-203ENST00000413433 MIER1Q8N108 512 aa11.71□□□□□ -0.53
NOD1-203ENST00000413433 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
NOD1-203ENST00000413433 TTLL13PA6NNM8 815 aa11.7□□□□□ -0.54
NOD1-203ENST00000413433 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
NOD1-203ENST00000413433 PKD2Q13563 968 aa11.68□□□□□ -0.54
NOD1-203ENST00000413433 IER5LQ5T953 404 aa11.68□□□□□ -0.54
NOD1-203ENST00000413433 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.68□□□□□ -0.54
NOD1-203ENST00000413433 COLQQ9Y215 455 aaPredicted RBP11.68□□□□□ -0.54
NOD1-203ENST00000413433 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
NOD1-203ENST00000413433 CDAN1Q8IWY9 1227 aa11.65□□□□□ -0.54
NOD1-203ENST00000413433 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
NOD1-203ENST00000413433 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
NOD1-203ENST00000413433 BBXQ8WY36 941 aaPredicted RBP11.59□□□□□ -0.55
NOD1-203ENST00000413433 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
NOD1-203ENST00000413433 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
NOD1-203ENST00000413433 TPRNQ4KMQ1 711 aa11.57□□□□□ -0.56
NOD1-203ENST00000413433 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
NOD1-203ENST00000413433 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
NOD1-203ENST00000413433 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
NOD1-203ENST00000413433 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
NOD1-203ENST00000413433 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
NOD1-203ENST00000413433 ST18O60284 1047 aa11.53□□□□□ -0.56
NOD1-203ENST00000413433 PLCG2P16885 1265 aa11.52□□□□□ -0.57
NOD1-203ENST00000413433 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
NOD1-203ENST00000413433 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
NOD1-203ENST00000413433 TMEM106CQ9BVX2 250 aa11.5□□□□□ -0.57
NOD1-203ENST00000413433 NUBP1P53384 320 aa11.49□□□□□ -0.57
NOD1-203ENST00000413433 KDM2AQ9Y2K7 1162 aa11.49□□□□□ -0.57
NOD1-203ENST00000413433 FAM212AQ96EL1 285 aa11.48□□□□□ -0.57
NOD1-203ENST00000413433 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
NOD1-203ENST00000413433 TMEM121BQ9BXQ6 578 aaPredicted RBP11.43□□□□□ -0.58
NOD1-203ENST00000413433 SNPHO15079 494 aa11.42□□□□□ -0.58
NOD1-203ENST00000413433 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
NOD1-203ENST00000413433 OCEL1Q9H607 264 aa11.4□□□□□ -0.58
NOD1-203ENST00000413433 MMRN1Q13201 1228 aa11.37□□□□□ -0.59
NOD1-203ENST00000413433 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
NOD1-203ENST00000413433 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
NOD1-203ENST00000413433 RGL2O15211 777 aa11.34□□□□□ -0.59
NOD1-203ENST00000413433 NBR1Q14596 966 aa11.31□□□□□ -0.6
NOD1-203ENST00000413433 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
NOD1-203ENST00000413433 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
NOD1-203ENST00000413433 PYGBP11216 843 aa11.28□□□□□ -0.6
NOD1-203ENST00000413433 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
NOD1-203ENST00000413433 CHGAP10645 457 aaKnown RBP11.27□□□□□ -0.61
NOD1-203ENST00000413433 PCDHB8Q9UN66 801 aa11.25□□□□□ -0.61
NOD1-203ENST00000413433 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
NOD1-203ENST00000413433 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
NOD1-203ENST00000413433 L3MBTL3Q96JM7 780 aaPredicted RBP11.22□□□□□ -0.61
NOD1-203ENST00000413433 EMP3P54852 163 aa11.2□□□□□ -0.62
NOD1-203ENST00000413433 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
NOD1-203ENST00000413433 PDCD7Q8N8D1 485 aaKnown RBP11.2□□□□□ -0.62
NOD1-203ENST00000413433 ABCC9O60706 1549 aa11.19□□□□□ -0.62
NOD1-203ENST00000413433 MKRN3Q13064 507 aaKnown RBP11.18□□□□□ -0.62
NOD1-203ENST00000413433 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
NOD1-203ENST00000413433 TRIM41Q8WV44 630 aa11.15□□□□□ -0.62
NOD1-203ENST00000413433 GSE1Q14687 1217 aa11.13□□□□□ -0.63
NOD1-203ENST00000413433 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
NOD1-203ENST00000413433 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
NOD1-203ENST00000413433 HS6ST3Q8IZP7 471 aa11.11□□□□□ -0.63
NOD1-203ENST00000413433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.11□□□□□ -0.63
NOD1-203ENST00000413433 FAM205CA6NFA0 338 aa11.1□□□□□ -0.63
NOD1-203ENST00000413433 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
NOD1-203ENST00000413433 KRTAP3-2Q9BYR7 98 aa11.1□□□□□ -0.63
NOD1-203ENST00000413433 CHRM1P11229 460 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms