RNA–Protein interactions for RNA: ENST00000413200.1

SRIP3-201, Transcript of sorcin pseudogene 3, humanhuman

BASIC

Gene SRIP3, Length 219 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRIP3-201ENST00000413200 ZBTB47Q9UFB7 747 aaPredicted RBP4.7□□□□□ -1.66
SRIP3-201ENST00000413200 CHGAP10645 457 aaKnown RBP4.69□□□□□ -1.66
SRIP3-201ENST00000413200 MNX1P50219 401 aaPredicted RBP4.69□□□□□ -1.66
SRIP3-201ENST00000413200 CIZ1Q9ULV3 898 aaPredicted RBP4.69□□□□□ -1.66
SRIP3-201ENST00000413200 SPRYD3Q8NCJ5 442 aa4.68□□□□□ -1.66
SRIP3-201ENST00000413200 NUBP1P53384 320 aa4.67□□□□□ -1.66
SRIP3-201ENST00000413200 CHRDL2Q6WN34 429 aa4.66□□□□□ -1.66
SRIP3-201ENST00000413200 PRKAR2AP13861 404 aaKnown RBP4.65□□□□□ -1.67
SRIP3-201ENST00000413200 FXR2P51116 673 aaKnown RBP eCLIP4.65□□□□□ -1.67
SRIP3-201ENST00000413200 DCAF8Q5TAQ9 597 aa4.64□□□□□ -1.67
SRIP3-201ENST00000413200 RASEFQ8IZ41 740 aa4.64□□□□□ -1.67
SRIP3-201ENST00000413200 RNF25Q96BH1 459 aaPredicted RBP4.64□□□□□ -1.67
SRIP3-201ENST00000413200 PIP4P2Q8N4L2 257 aa4.63□□□□□ -1.67
SRIP3-201ENST00000413200 FARP1Q9Y4F1 1045 aaPredicted RBP4.63□□□□□ -1.67
SRIP3-201ENST00000413200 DNAJC5Q9H3Z4 198 aa4.62□□□□□ -1.67
SRIP3-201ENST00000413200 GSE1Q14687 1217 aa4.61□□□□□ -1.67
SRIP3-201ENST00000413200 NKX1-1Q15270 411 aaPredicted RBP4.61□□□□□ -1.67
SRIP3-201ENST00000413200 HS6ST3Q8IZP7 471 aa4.61□□□□□ -1.67
SRIP3-201ENST00000413200 FAM212AQ96EL1 285 aa4.61□□□□□ -1.67
SRIP3-201ENST00000413200 TSPYL2Q9H2G4 693 aaPredicted RBP4.6□□□□□ -1.67
SRIP3-201ENST00000413200 PYGBP11216 843 aa4.58□□□□□ -1.68
SRIP3-201ENST00000413200 GTPBP6O43824 516 aaPredicted RBP4.57□□□□□ -1.68
SRIP3-201ENST00000413200 NBR1Q14596 966 aa4.57□□□□□ -1.68
SRIP3-201ENST00000413200 TRIM41Q8WV44 630 aa4.57□□□□□ -1.68
SRIP3-201ENST00000413200 RIOK3O14730 519 aaKnown RBP4.55□□□□□ -1.68
SRIP3-201ENST00000413200 CHRM1P11229 460 aaPredicted RBP4.54□□□□□ -1.68
SRIP3-201ENST00000413200 CCDC61Q9Y6R9 512 aa4.54□□□□□ -1.68
SRIP3-201ENST00000413200 STK25O00506 426 aa4.52□□□□□ -1.69
SRIP3-201ENST00000413200 PAK3O75914 559 aaPredicted RBP4.52□□□□□ -1.69
SRIP3-201ENST00000413200 CD44P16070 742 aaKnown RBP4.52□□□□□ -1.69
SRIP3-201ENST00000413200 ZRANB1Q9UGI0 708 aa4.52□□□□□ -1.69
SRIP3-201ENST00000413200 PCDHB8Q9UN66 801 aa4.51□□□□□ -1.69
SRIP3-201ENST00000413200 PCDHB13Q9Y5F0 798 aa4.51□□□□□ -1.69
SRIP3-201ENST00000413200 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.5□□□□□ -1.69
SRIP3-201ENST00000413200 VGFO15240 615 aaPredicted RBP4.5□□□□□ -1.69
SRIP3-201ENST00000413200 MAP3K13O43283 966 aa4.5□□□□□ -1.69
SRIP3-201ENST00000413200 ZFP91Q96JP5 570 aaPredicted RBP4.5□□□□□ -1.69
SRIP3-201ENST00000413200 PHF12Q96QT6 1004 aa4.5□□□□□ -1.69
SRIP3-201ENST00000413200 KIF12Q96FN5 646 aa4.49□□□□□ -1.69
SRIP3-201ENST00000413200 BCL11BQ9C0K0 894 aaPredicted RBP4.49□□□□□ -1.69
SRIP3-201ENST00000413200 TIMELESSQ9UNS1 1208 aa4.49□□□□□ -1.69
SRIP3-201ENST00000413200 STK24Q9Y6E0 443 aa4.49□□□□□ -1.69
SRIP3-201ENST00000413200 C19orf67A6NJJ6 358 aa4.48□□□□□ -1.69
SRIP3-201ENST00000413200 IFNL1Q8IU54 200 aa4.48□□□□□ -1.69
SRIP3-201ENST00000413200 TULP1O00294 542 aaPredicted RBP4.47□□□□□ -1.69
SRIP3-201ENST00000413200 EVX2Q03828 476 aa4.47□□□□□ -1.69
SRIP3-201ENST00000413200 ZNF467Q7Z7K2 595 aaPredicted RBP4.47□□□□□ -1.69
SRIP3-201ENST00000413200 HAX1O00165 279 aa4.46□□□□□ -1.7
SRIP3-201ENST00000413200 CADPS2Q86UW7 1296 aa4.46□□□□□ -1.7
SRIP3-201ENST00000413200 ZNF579Q8NAF0 562 aaKnown RBP4.46□□□□□ -1.7
SRIP3-201ENST00000413200 SGIP1Q9BQI5 828 aa4.46□□□□□ -1.7
SRIP3-201ENST00000413200 PSEN1P49768 467 aa4.45□□□□□ -1.7
SRIP3-201ENST00000413200 PDAP1Q13442 181 aaKnown RBP4.45□□□□□ -1.7
SRIP3-201ENST00000413200 MS4A3Q96HJ5 214 aa4.44□□□□□ -1.7
SRIP3-201ENST00000413200 KCNV2Q8TDN2 545 aa4.43□□□□□ -1.7
SRIP3-201ENST00000413200 TRPC6Q9Y210 931 aa4.43□□□□□ -1.7
SRIP3-201ENST00000413200 GTF3C3Q9Y5Q9 886 aa4.43□□□□□ -1.7
SRIP3-201ENST00000413200 GALR2O43603 387 aaPredicted RBP4.41□□□□□ -1.7
SRIP3-201ENST00000413200 POTEHQ6S545 545 aa4.41□□□□□ -1.7
SRIP3-201ENST00000413200 CABP2Q9NPB3 220 aa4.4□□□□□ -1.71
SRIP3-201ENST00000413200 LMOD2Q6P5Q4 547 aa4.39□□□□□ -1.71
SRIP3-201ENST00000413200 EFCAB3Q8N7B9 438 aa4.39□□□□□ -1.71
SRIP3-201ENST00000413200 TMEM106CQ9BVX2 250 aa4.39□□□□□ -1.71
SRIP3-201ENST00000413200 RYDENQ9NUL5 291 aaKnown RBP4.39□□□□□ -1.71
SRIP3-201ENST00000413200 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.38□□□□□ -1.71
SRIP3-201ENST00000413200 P3H3Q8IVL6 736 aa4.38□□□□□ -1.71
SRIP3-201ENST00000413200 MFRPQ9BY79 579 aa4.38□□□□□ -1.71
SRIP3-201ENST00000413200 PPP1R37O75864 691 aa4.37□□□□□ -1.71
SRIP3-201ENST00000413200 TMEM132AQ24JP5 1023 aa4.37□□□□□ -1.71
SRIP3-201ENST00000413200 WDR70Q9NW82 654 aa4.37□□□□□ -1.71
SRIP3-201ENST00000413200 PHF8Q9UPP1 1060 aa4.37□□□□□ -1.71
SRIP3-201ENST00000413200 TTLL13PA6NNM8 815 aa4.36□□□□□ -1.71
SRIP3-201ENST00000413200 BMP2KQ9NSY1 1161 aaPredicted RBP4.36□□□□□ -1.71
SRIP3-201ENST00000413200 SOX12O15370 315 aa4.35□□□□□ -1.71
SRIP3-201ENST00000413200 GABBR2O75899 941 aa4.35□□□□□ -1.71
SRIP3-201ENST00000413200 TIE1P35590 1138 aa4.35□□□□□ -1.71
SRIP3-201ENST00000413200 GOLGA2Q08379 1002 aa4.35□□□□□ -1.71
SRIP3-201ENST00000413200 FBXO22Q8NEZ5 403 aa4.35□□□□□ -1.71
SRIP3-201ENST00000413200 ATN1P54259 1190 aaPredicted RBP4.34□□□□□ -1.71
SRIP3-201ENST00000413200 BRPF1P55201 1214 aaPredicted RBP4.34□□□□□ -1.71
SRIP3-201ENST00000413200 NLRP6P59044 892 aa4.34□□□□□ -1.71
SRIP3-201ENST00000413200 SEMA3EO15041 775 aa4.33□□□□□ -1.72
SRIP3-201ENST00000413200 MKRN3Q13064 507 aaKnown RBP4.33□□□□□ -1.72
SRIP3-201ENST00000413200 ZC3H15Q8WU90 426 aaKnown RBP4.33□□□□□ -1.72
SRIP3-201ENST00000413200 MS4A4AQ96JQ5 239 aa4.33□□□□□ -1.72
SRIP3-201ENST00000413200 TRIM35Q9UPQ4 493 aa4.33□□□□□ -1.72
SRIP3-201ENST00000413200 ATMINO43313 823 aaPredicted RBP4.32□□□□□ -1.72
SRIP3-201ENST00000413200 CLCN6P51797 869 aa4.32□□□□□ -1.72
SRIP3-201ENST00000413200 PELP1Q8IZL8 1130 aaKnown RBP4.31□□□□□ -1.72
SRIP3-201ENST00000413200 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.31□□□□□ -1.72
SRIP3-201ENST00000413200 NCKAP5LQ9HCH0 1330 aa4.3□□□□□ -1.72
SRIP3-201ENST00000413200 TESPA1A2RU30 521 aaPredicted RBP4.3□□□□□ -1.72
SRIP3-201ENST00000413200 E2F4Q16254 413 aa4.3□□□□□ -1.72
SRIP3-201ENST00000413200 ASTLQ6HA08 431 aaPredicted RBP4.3□□□□□ -1.72
SRIP3-201ENST00000413200 DPY19L2Q6NUT2 758 aa4.3□□□□□ -1.72
SRIP3-201ENST00000413200 C14orf37Q86TY3 774 aa4.3□□□□□ -1.72
SRIP3-201ENST00000413200 ARHGEF1Q92888 912 aaKnown RBP4.3□□□□□ -1.72
SRIP3-201ENST00000413200 SLC24A3Q9HC58 644 aa4.3□□□□□ -1.72
SRIP3-201ENST00000413200 NEUROD2Q15784 382 aa4.29□□□□□ -1.72
SRIP3-201ENST00000413200 SP7Q8TDD2 431 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms