RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 CDAN1Q8IWY9 1227 aa11.7□□□□□ -0.54
RNU4-61P-201ENST00000411243 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
RNU4-61P-201ENST00000411243 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
RNU4-61P-201ENST00000411243 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
RNU4-61P-201ENST00000411243 MS4A3Q96HJ5 214 aa11.59□□□□□ -0.55
RNU4-61P-201ENST00000411243 MMRN1Q13201 1228 aa11.54□□□□□ -0.56
RNU4-61P-201ENST00000411243 POTEFA5A3E0 1075 aa11.49□□□□□ -0.57
RNU4-61P-201ENST00000411243 ATN1P54259 1190 aaPredicted RBP11.47□□□□□ -0.57
RNU4-61P-201ENST00000411243 STAG3Q9UJ98 1225 aa11.47□□□□□ -0.57
RNU4-61P-201ENST00000411243 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
RNU4-61P-201ENST00000411243 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
RNU4-61P-201ENST00000411243 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
RNU4-61P-201ENST00000411243 ST18O60284 1047 aa11.38□□□□□ -0.59
RNU4-61P-201ENST00000411243 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
RNU4-61P-201ENST00000411243 COLQQ9Y215 455 aaPredicted RBP11.3□□□□□ -0.6
RNU4-61P-201ENST00000411243 TIE1P35590 1138 aa11.24□□□□□ -0.61
RNU4-61P-201ENST00000411243 SLAIN1Q8ND83 568 aa11.24□□□□□ -0.61
RNU4-61P-201ENST00000411243 TRPC6Q9Y210 931 aa11.24□□□□□ -0.61
RNU4-61P-201ENST00000411243 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
RNU4-61P-201ENST00000411243 SEC24BO95487 1268 aa11.23□□□□□ -0.61
RNU4-61P-201ENST00000411243 KIF12Q96FN5 646 aa11.23□□□□□ -0.61
RNU4-61P-201ENST00000411243 TMEM121BQ9BXQ6 578 aaPredicted RBP11.22□□□□□ -0.61
RNU4-61P-201ENST00000411243 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
RNU4-61P-201ENST00000411243 IER5LQ5T953 404 aa11.16□□□□□ -0.62
RNU4-61P-201ENST00000411243 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
RNU4-61P-201ENST00000411243 MAP3K13O43283 966 aa11.09□□□□□ -0.63
RNU4-61P-201ENST00000411243 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
RNU4-61P-201ENST00000411243 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
RNU4-61P-201ENST00000411243 SNPHO15079 494 aa11.03□□□□□ -0.64
RNU4-61P-201ENST00000411243 KRTAP3-3Q9BYR6 98 aa11.02□□□□□ -0.65
RNU4-61P-201ENST00000411243 KRTAP3-2Q9BYR7 98 aa11.02□□□□□ -0.65
RNU4-61P-201ENST00000411243 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
RNU4-61P-201ENST00000411243 PLCG2P16885 1265 aa10.95□□□□□ -0.66
RNU4-61P-201ENST00000411243 EMP3P54852 163 aa10.93□□□□□ -0.66
RNU4-61P-201ENST00000411243 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
RNU4-61P-201ENST00000411243 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
RNU4-61P-201ENST00000411243 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
RNU4-61P-201ENST00000411243 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
RNU4-61P-201ENST00000411243 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
RNU4-61P-201ENST00000411243 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
RNU4-61P-201ENST00000411243 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.86□□□□□ -0.67
RNU4-61P-201ENST00000411243 PCDHB13Q9Y5F0 798 aa10.84□□□□□ -0.67
RNU4-61P-201ENST00000411243 FAM205CA6NFA0 338 aa10.81□□□□□ -0.68
RNU4-61P-201ENST00000411243 TMEM106CQ9BVX2 250 aa10.81□□□□□ -0.68
RNU4-61P-201ENST00000411243 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
RNU4-61P-201ENST00000411243 RNF166Q96A37 237 aaPredicted RBP10.78□□□□□ -0.68
RNU4-61P-201ENST00000411243 IFNL1Q8IU54 200 aa10.77□□□□□ -0.69
RNU4-61P-201ENST00000411243 PROM2Q8N271 834 aa10.66□□□□□ -0.7
RNU4-61P-201ENST00000411243 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
RNU4-61P-201ENST00000411243 C3orf67Q6ZVT6 689 aa10.65□□□□□ -0.7
RNU4-61P-201ENST00000411243 MYT1LQ9UL68 1186 aa10.62□□□□□ -0.71
RNU4-61P-201ENST00000411243 PDCD7Q8N8D1 485 aaKnown RBP10.59□□□□□ -0.71
RNU4-61P-201ENST00000411243 MIER1Q8N108 512 aa10.56□□□□□ -0.72
RNU4-61P-201ENST00000411243 NUBP1P53384 320 aa10.54□□□□□ -0.72
RNU4-61P-201ENST00000411243 L3MBTL3Q96JM7 780 aaPredicted RBP10.54□□□□□ -0.72
RNU4-61P-201ENST00000411243 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
RNU4-61P-201ENST00000411243 HOXB3P14651 431 aaPredicted RBP10.5□□□□□ -0.73
RNU4-61P-201ENST00000411243 PTGER2P43116 358 aa10.48□□□□□ -0.73
RNU4-61P-201ENST00000411243 ERBB3P21860 1342 aa10.48□□□□□ -0.73
RNU4-61P-201ENST00000411243 FAM212AQ96EL1 285 aa10.47□□□□□ -0.73
RNU4-61P-201ENST00000411243 VARS2Q5ST30 1063 aaKnown RBP10.4□□□□□ -0.74
RNU4-61P-201ENST00000411243 ZNF710Q8N1W2 664 aa10.4□□□□□ -0.74
RNU4-61P-201ENST00000411243 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
RNU4-61P-201ENST00000411243 PLCD3Q8N3E9 789 aa10.37□□□□□ -0.75
RNU4-61P-201ENST00000411243 PCDHB8Q9UN66 801 aa10.37□□□□□ -0.75
RNU4-61P-201ENST00000411243 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
RNU4-61P-201ENST00000411243 ZNF687Q8N1G0 1237 aa10.36□□□□□ -0.75
RNU4-61P-201ENST00000411243 DOK7Q18PE1 504 aa10.35□□□□□ -0.75
RNU4-61P-201ENST00000411243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.34□□□□□ -0.75
RNU4-61P-201ENST00000411243 PLA2G2EQ9NZK7 142 aa10.34□□□□□ -0.75
RNU4-61P-201ENST00000411243 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
RNU4-61P-201ENST00000411243 ILDR1Q86SU0 546 aaPredicted RBP10.32□□□□□ -0.76
RNU4-61P-201ENST00000411243 PYGBP11216 843 aa10.31□□□□□ -0.76
RNU4-61P-201ENST00000411243 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
RNU4-61P-201ENST00000411243 RIMBP2O15034 1052 aa10.27□□□□□ -0.77
RNU4-61P-201ENST00000411243 DPY19L2Q6NUT2 758 aa10.24□□□□□ -0.77
RNU4-61P-201ENST00000411243 BOLA1Q9Y3E2 137 aa10.24□□□□□ -0.77
RNU4-61P-201ENST00000411243 ANKRD13DQ6ZTN6 518 aa10.22□□□□□ -0.77
RNU4-61P-201ENST00000411243 ZSWIM6Q9HCJ5 1215 aa10.22□□□□□ -0.77
RNU4-61P-201ENST00000411243 G3V3G9 751 aa10.2□□□□□ -0.78
RNU4-61P-201ENST00000411243 DCAF8Q5TAQ9 597 aa10.2□□□□□ -0.78
RNU4-61P-201ENST00000411243 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
RNU4-61P-201ENST00000411243 LSM11P83369 360 aaKnown RBP eCLIP10.17□□□□□ -0.78
RNU4-61P-201ENST00000411243 HCSTQ9UBK5 93 aa10.16□□□□□ -0.78
RNU4-61P-201ENST00000411243 GPR153Q6NV75 609 aa10.15□□□□□ -0.78
RNU4-61P-201ENST00000411243 PSEN1P49768 467 aa10.13□□□□□ -0.79
RNU4-61P-201ENST00000411243 IRX2Q9BZI1 471 aaPredicted RBP10.04□□□□□ -0.8
RNU4-61P-201ENST00000411243 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
RNU4-61P-201ENST00000411243 RGS20O76081 388 aa10.03□□□□□ -0.8
RNU4-61P-201ENST00000411243 PBX2P40425 430 aa10.01□□□□□ -0.81
RNU4-61P-201ENST00000411243 TMEM92Q6UXU6 159 aa10.01□□□□□ -0.81
RNU4-61P-201ENST00000411243 CHRM1P11229 460 aaPredicted RBP10□□□□□ -0.81
RNU4-61P-201ENST00000411243 PDAP1Q13442 181 aaKnown RBP9.99□□□□□ -0.81
RNU4-61P-201ENST00000411243 CABP2Q9NPB3 220 aa9.99□□□□□ -0.81
RNU4-61P-201ENST00000411243 ARSIQ5FYB1 569 aa9.98□□□□□ -0.81
RNU4-61P-201ENST00000411243 GSE1Q14687 1217 aa9.94□□□□□ -0.82
RNU4-61P-201ENST00000411243 POTEEQ6S8J3 1075 aa9.93□□□□□ -0.82
RNU4-61P-201ENST00000411243 MICALL2Q8IY33 904 aa9.91□□□□□ -0.82
RNU4-61P-201ENST00000411243 KHSRPQ92945 711 aaKnown RBP eCLIP9.91□□□□□ -0.82
RNU4-61P-201ENST00000411243 ADGRD1Q6QNK2 874 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms