RNA–Protein interactions for RNA: ENST00000410983.1

RNU6-564P-201, Transcript of RNA, U6 small nuclear 564, pseudogene, humanhuman

BASIC

Gene RNU6-564P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-564P-201ENST00000410983 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
RNU6-564P-201ENST00000410983 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
RNU6-564P-201ENST00000410983 HS6ST3Q8IZP7 471 aa13.21□□□□□ -0.29
RNU6-564P-201ENST00000410983 RNF25Q96BH1 459 aaPredicted RBP13.19□□□□□ -0.3
RNU6-564P-201ENST00000410983 FAM212AQ96EL1 285 aa13.18□□□□□ -0.3
RNU6-564P-201ENST00000410983 TAOK2Q9UL54 1235 aa13.18□□□□□ -0.3
RNU6-564P-201ENST00000410983 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
RNU6-564P-201ENST00000410983 MNX1P50219 401 aaPredicted RBP13.16□□□□□ -0.3
RNU6-564P-201ENST00000410983 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
RNU6-564P-201ENST00000410983 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
RNU6-564P-201ENST00000410983 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
RNU6-564P-201ENST00000410983 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
RNU6-564P-201ENST00000410983 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
RNU6-564P-201ENST00000410983 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
RNU6-564P-201ENST00000410983 STK25O00506 426 aa13.02□□□□□ -0.33
RNU6-564P-201ENST00000410983 PRKCSHP14314 528 aaPredicted RBP13□□□□□ -0.33
RNU6-564P-201ENST00000410983 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
RNU6-564P-201ENST00000410983 SGIP1Q9BQI5 828 aa12.98□□□□□ -0.33
RNU6-564P-201ENST00000410983 PYGBP11216 843 aa12.97□□□□□ -0.33
RNU6-564P-201ENST00000410983 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.33
RNU6-564P-201ENST00000410983 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
RNU6-564P-201ENST00000410983 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
RNU6-564P-201ENST00000410983 ZFP91Q96JP5 570 aaPredicted RBP12.93□□□□□ -0.34
RNU6-564P-201ENST00000410983 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
RNU6-564P-201ENST00000410983 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
RNU6-564P-201ENST00000410983 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
RNU6-564P-201ENST00000410983 RYDENQ9NUL5 291 aaKnown RBP12.87□□□□□ -0.35
RNU6-564P-201ENST00000410983 NBR1Q14596 966 aa12.85□□□□□ -0.35
RNU6-564P-201ENST00000410983 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
RNU6-564P-201ENST00000410983 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
RNU6-564P-201ENST00000410983 ZNF467Q7Z7K2 595 aaPredicted RBP12.81□□□□□ -0.36
RNU6-564P-201ENST00000410983 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
RNU6-564P-201ENST00000410983 PDAP1Q13442 181 aaKnown RBP12.74□□□□□ -0.37
RNU6-564P-201ENST00000410983 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
RNU6-564P-201ENST00000410983 PCDHB13Q9Y5F0 798 aa12.71□□□□□ -0.37
RNU6-564P-201ENST00000410983 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
RNU6-564P-201ENST00000410983 FXR2P51116 673 aaKnown RBP eCLIP12.69□□□□□ -0.38
RNU6-564P-201ENST00000410983 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
RNU6-564P-201ENST00000410983 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
RNU6-564P-201ENST00000410983 PSEN1P49768 467 aa12.66□□□□□ -0.38
RNU6-564P-201ENST00000410983 P3H3Q8IVL6 736 aa12.59□□□□□ -0.39
RNU6-564P-201ENST00000410983 WDR70Q9NW82 654 aa12.59□□□□□ -0.39
RNU6-564P-201ENST00000410983 MFRPQ9BY79 579 aa12.57□□□□□ -0.4
RNU6-564P-201ENST00000410983 CADPS2Q86UW7 1296 aa12.56□□□□□ -0.4
RNU6-564P-201ENST00000410983 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
RNU6-564P-201ENST00000410983 MAP3K13O43283 966 aa12.55□□□□□ -0.4
RNU6-564P-201ENST00000410983 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
RNU6-564P-201ENST00000410983 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
RNU6-564P-201ENST00000410983 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
RNU6-564P-201ENST00000410983 EFCAB3Q8N7B9 438 aa12.5□□□□□ -0.41
RNU6-564P-201ENST00000410983 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
RNU6-564P-201ENST00000410983 SOX12O15370 315 aa12.49□□□□□ -0.41
RNU6-564P-201ENST00000410983 NLRP6P59044 892 aa12.49□□□□□ -0.41
RNU6-564P-201ENST00000410983 KCNV2Q8TDN2 545 aa12.46□□□□□ -0.41
RNU6-564P-201ENST00000410983 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
RNU6-564P-201ENST00000410983 PPP1R37O75864 691 aa12.45□□□□□ -0.42
RNU6-564P-201ENST00000410983 FBXO22Q8NEZ5 403 aa12.45□□□□□ -0.42
RNU6-564P-201ENST00000410983 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
RNU6-564P-201ENST00000410983 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
RNU6-564P-201ENST00000410983 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
RNU6-564P-201ENST00000410983 GOLGA2Q08379 1002 aa12.34□□□□□ -0.43
RNU6-564P-201ENST00000410983 E2F4Q16254 413 aa12.34□□□□□ -0.43
RNU6-564P-201ENST00000410983 ARHGEF1Q92888 912 aaKnown RBP12.33□□□□□ -0.44
RNU6-564P-201ENST00000410983 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
RNU6-564P-201ENST00000410983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
RNU6-564P-201ENST00000410983 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
RNU6-564P-201ENST00000410983 TMEM106CQ9BVX2 250 aa12.3□□□□□ -0.44
RNU6-564P-201ENST00000410983 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
RNU6-564P-201ENST00000410983 PDE4AP27815 886 aa12.28□□□□□ -0.44
RNU6-564P-201ENST00000410983 MKRN3Q13064 507 aaKnown RBP12.26□□□□□ -0.45
RNU6-564P-201ENST00000410983 MS4A3Q96HJ5 214 aa12.26□□□□□ -0.45
RNU6-564P-201ENST00000410983 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
RNU6-564P-201ENST00000410983 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
RNU6-564P-201ENST00000410983 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
RNU6-564P-201ENST00000410983 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
RNU6-564P-201ENST00000410983 MFSD10Q14728 455 aa12.21□□□□□ -0.45
RNU6-564P-201ENST00000410983 CRISPLD2Q9H0B8 497 aa12.21□□□□□ -0.45
RNU6-564P-201ENST00000410983 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
RNU6-564P-201ENST00000410983 SEMA3EO15041 775 aa12.19□□□□□ -0.46
RNU6-564P-201ENST00000410983 TIE1P35590 1138 aa12.19□□□□□ -0.46
RNU6-564P-201ENST00000410983 TESPA1A2RU30 521 aaPredicted RBP12.18□□□□□ -0.46
RNU6-564P-201ENST00000410983 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
RNU6-564P-201ENST00000410983 SMYD5Q6GMV2 418 aa12.13□□□□□ -0.47
RNU6-564P-201ENST00000410983 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
RNU6-564P-201ENST00000410983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.47
RNU6-564P-201ENST00000410983 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
RNU6-564P-201ENST00000410983 TMEM132AQ24JP5 1023 aa12.12□□□□□ -0.47
RNU6-564P-201ENST00000410983 CAMK2BQ13554 666 aa12.11□□□□□ -0.47
RNU6-564P-201ENST00000410983 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
RNU6-564P-201ENST00000410983 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
RNU6-564P-201ENST00000410983 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
RNU6-564P-201ENST00000410983 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
RNU6-564P-201ENST00000410983 GPHNQ9NQX3 736 aaPredicted RBP12.06□□□□□ -0.48
RNU6-564P-201ENST00000410983 PPP1R15BQ5SWA1 713 aa12.05□□□□□ -0.48
RNU6-564P-201ENST00000410983 GALR2O43603 387 aaPredicted RBP12.04□□□□□ -0.48
RNU6-564P-201ENST00000410983 CLCN6P51797 869 aa12.02□□□□□ -0.49
RNU6-564P-201ENST00000410983 SLC24A3Q9HC58 644 aa12.01□□□□□ -0.49
RNU6-564P-201ENST00000410983 DPY19L2Q6NUT2 758 aa12□□□□□ -0.49
RNU6-564P-201ENST00000410983 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
RNU6-564P-201ENST00000410983 ZMYND10O75800 440 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms