RNA–Protein interactions for RNA: ENST00000410804.1

RNU4-6P-201, Transcript of RNA, U4 small nuclear 6, pseudogene, humanhuman

BASIC

Gene RNU4-6P, Length 122 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-6P-201ENST00000410804 CCDC61Q9Y6R9 512 aa9.46□□□□□ -0.9
RNU4-6P-201ENST00000410804 RASEFQ8IZ41 740 aa9.43□□□□□ -0.9
RNU4-6P-201ENST00000410804 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
RNU4-6P-201ENST00000410804 KIF12Q96FN5 646 aa9.4□□□□□ -0.9
RNU4-6P-201ENST00000410804 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
RNU4-6P-201ENST00000410804 ZBTB47Q9UFB7 747 aaPredicted RBP9.38□□□□□ -0.91
RNU4-6P-201ENST00000410804 ATMINO43313 823 aaPredicted RBP9.37□□□□□ -0.91
RNU4-6P-201ENST00000410804 POTEB2H3BUK9 544 aa9.36□□□□□ -0.91
RNU4-6P-201ENST00000410804 MAP3K13O43283 966 aa9.36□□□□□ -0.91
RNU4-6P-201ENST00000410804 NUBP1P53384 320 aa9.34□□□□□ -0.91
RNU4-6P-201ENST00000410804 FBXO3Q9UK99 471 aa9.33□□□□□ -0.92
RNU4-6P-201ENST00000410804 TRPC6Q9Y210 931 aa9.33□□□□□ -0.92
RNU4-6P-201ENST00000410804 ATN1P54259 1190 aaPredicted RBP9.32□□□□□ -0.92
RNU4-6P-201ENST00000410804 SLC39A7Q92504 469 aa9.32□□□□□ -0.92
RNU4-6P-201ENST00000410804 METRNQ9UJH8 293 aa9.32□□□□□ -0.92
RNU4-6P-201ENST00000410804 C7P10643 843 aa9.3□□□□□ -0.92
RNU4-6P-201ENST00000410804 OTUD5Q96G74 571 aa9.3□□□□□ -0.92
RNU4-6P-201ENST00000410804 BMP2KQ9NSY1 1161 aaPredicted RBP9.3□□□□□ -0.92
RNU4-6P-201ENST00000410804 FAM212AQ96EL1 285 aa9.28□□□□□ -0.92
RNU4-6P-201ENST00000410804 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
RNU4-6P-201ENST00000410804 TIE1P35590 1138 aa9.26□□□□□ -0.93
RNU4-6P-201ENST00000410804 SGIP1Q9BQI5 828 aa9.25□□□□□ -0.93
RNU4-6P-201ENST00000410804 DCAF8Q5TAQ9 597 aa9.24□□□□□ -0.93
RNU4-6P-201ENST00000410804 TTLL13PA6NNM8 815 aa9.23□□□□□ -0.93
RNU4-6P-201ENST00000410804 POTEJP0CG39 1038 aa9.22□□□□□ -0.93
RNU4-6P-201ENST00000410804 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.94
RNU4-6P-201ENST00000410804 IFNL1Q8IU54 200 aa9.21□□□□□ -0.94
RNU4-6P-201ENST00000410804 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
RNU4-6P-201ENST00000410804 POTEFA5A3E0 1075 aa9.19□□□□□ -0.94
RNU4-6P-201ENST00000410804 PYGBP11216 843 aa9.18□□□□□ -0.94
RNU4-6P-201ENST00000410804 TRIM35Q9UPQ4 493 aa9.18□□□□□ -0.94
RNU4-6P-201ENST00000410804 MAMSTRQ6ZN01 415 aa9.16□□□□□ -0.94
RNU4-6P-201ENST00000410804 SEC24BO95487 1268 aa9.15□□□□□ -0.94
RNU4-6P-201ENST00000410804 TMEM106CQ9BVX2 250 aa9.14□□□□□ -0.95
RNU4-6P-201ENST00000410804 COLQQ9Y215 455 aaPredicted RBP9.14□□□□□ -0.95
RNU4-6P-201ENST00000410804 SCUBE2Q9NQ36 999 aa9.13□□□□□ -0.95
RNU4-6P-201ENST00000410804 IER5LQ5T953 404 aa9.11□□□□□ -0.95
RNU4-6P-201ENST00000410804 GSE1Q14687 1217 aa9.1□□□□□ -0.95
RNU4-6P-201ENST00000410804 PCDHB8Q9UN66 801 aa9.1□□□□□ -0.95
RNU4-6P-201ENST00000410804 IFNLR1Q8IU57 520 aaPredicted RBP9.06□□□□□ -0.96
RNU4-6P-201ENST00000410804 POTEMA6NI47 508 aa9.04□□□□□ -0.96
RNU4-6P-201ENST00000410804 PLCG2P16885 1265 aa9.03□□□□□ -0.96
RNU4-6P-201ENST00000410804 IRX5P78411 483 aaPredicted RBP9.02□□□□□ -0.97
RNU4-6P-201ENST00000410804 POTEGQ6S5H5 508 aa9.02□□□□□ -0.97
RNU4-6P-201ENST00000410804 ZNF467Q7Z7K2 595 aaPredicted RBP9.02□□□□□ -0.97
RNU4-6P-201ENST00000410804 SPOCK2Q92563 424 aa9.02□□□□□ -0.97
RNU4-6P-201ENST00000410804 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
RNU4-6P-201ENST00000410804 CHRM1P11229 460 aaPredicted RBP9.01□□□□□ -0.97
RNU4-6P-201ENST00000410804 CIZ1Q9ULV3 898 aaPredicted RBP9□□□□□ -0.97
RNU4-6P-201ENST00000410804 OCEL1Q9H607 264 aa8.99□□□□□ -0.97
RNU4-6P-201ENST00000410804 PLSCR2Q9NRY7 297 aa8.98□□□□□ -0.97
RNU4-6P-201ENST00000410804 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
RNU4-6P-201ENST00000410804 SLAIN1Q8ND83 568 aa8.96□□□□□ -0.98
RNU4-6P-201ENST00000410804 PSEN1P49768 467 aa8.95□□□□□ -0.98
RNU4-6P-201ENST00000410804 GOLGA2Q08379 1002 aa8.95□□□□□ -0.98
RNU4-6P-201ENST00000410804 MKRN3Q13064 507 aaKnown RBP8.94□□□□□ -0.98
RNU4-6P-201ENST00000410804 PDAP1Q13442 181 aaKnown RBP8.91□□□□□ -0.98
RNU4-6P-201ENST00000410804 PDCD7Q8N8D1 485 aaKnown RBP8.89□□□□□ -0.99
RNU4-6P-201ENST00000410804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.88□□□□□ -0.99
RNU4-6P-201ENST00000410804 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.87□□□□□ -0.99
RNU4-6P-201ENST00000410804 CABP2Q9NPB3 220 aa8.86□□□□□ -0.99
RNU4-6P-201ENST00000410804 PCDH10Q9P2E7 1040 aa8.86□□□□□ -0.99
RNU4-6P-201ENST00000410804 ST18O60284 1047 aa8.84□□□□□ -0.99
RNU4-6P-201ENST00000410804 L3MBTL3Q96JM7 780 aaPredicted RBP8.84□□□□□ -0.99
RNU4-6P-201ENST00000410804 TRIM41Q8WV44 630 aa8.83□□□□□ -1
RNU4-6P-201ENST00000410804 C3orf67Q6ZVT6 689 aa8.82□□□□□ -1
RNU4-6P-201ENST00000410804 DPY19L2Q6NUT2 758 aa8.8□□□□□ -1
RNU4-6P-201ENST00000410804 ILDR1Q86SU0 546 aaPredicted RBP8.8□□□□□ -1
RNU4-6P-201ENST00000410804 SNPHO15079 494 aa8.78□□□□□ -1
RNU4-6P-201ENST00000410804 CDAN1Q8IWY9 1227 aa8.76□□□□□ -1.01
RNU4-6P-201ENST00000410804 EFCAB3Q8N7B9 438 aa8.75□□□□□ -1.01
RNU4-6P-201ENST00000410804 G3V3G9 751 aa8.74□□□□□ -1.01
RNU4-6P-201ENST00000410804 RIOK3O14730 519 aaKnown RBP8.74□□□□□ -1.01
RNU4-6P-201ENST00000410804 RNF25Q96BH1 459 aaPredicted RBP8.74□□□□□ -1.01
RNU4-6P-201ENST00000410804 BOLA1Q9Y3E2 137 aa8.74□□□□□ -1.01
RNU4-6P-201ENST00000410804 TMEM121BQ9BXQ6 578 aaPredicted RBP8.72□□□□□ -1.01
RNU4-6P-201ENST00000410804 MARVELD3Q96A59 401 aa8.71□□□□□ -1.02
RNU4-6P-201ENST00000410804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.7□□□□□ -1.02
RNU4-6P-201ENST00000410804 ZFP91Q96JP5 570 aaPredicted RBP8.7□□□□□ -1.02
RNU4-6P-201ENST00000410804 VGFO15240 615 aaPredicted RBP8.69□□□□□ -1.02
RNU4-6P-201ENST00000410804 ABCC9O60706 1549 aa8.69□□□□□ -1.02
RNU4-6P-201ENST00000410804 CCDC180Q9P1Z9 1646 aa8.69□□□□□ -1.02
RNU4-6P-201ENST00000410804 SOX12O15370 315 aa8.65□□□□□ -1.02
RNU4-6P-201ENST00000410804 EMP3P54852 163 aa8.63□□□□□ -1.03
RNU4-6P-201ENST00000410804 PHF8Q9UPP1 1060 aa8.63□□□□□ -1.03
RNU4-6P-201ENST00000410804 MS4A4AQ96JQ5 239 aa8.62□□□□□ -1.03
RNU4-6P-201ENST00000410804 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
RNU4-6P-201ENST00000410804 MICALL2Q8IY33 904 aa8.61□□□□□ -1.03
RNU4-6P-201ENST00000410804 BCL11BQ9C0K0 894 aaPredicted RBP8.61□□□□□ -1.03
RNU4-6P-201ENST00000410804 HOXB3P14651 431 aaPredicted RBP8.6□□□□□ -1.03
RNU4-6P-201ENST00000410804 TAOK2Q9UL54 1235 aa8.6□□□□□ -1.03
RNU4-6P-201ENST00000410804 FAM205CA6NFA0 338 aa8.59□□□□□ -1.03
RNU4-6P-201ENST00000410804 STK24Q9Y6E0 443 aa8.59□□□□□ -1.03
RNU4-6P-201ENST00000410804 ZNF710Q8N1W2 664 aa8.58□□□□□ -1.04
RNU4-6P-201ENST00000410804 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
RNU4-6P-201ENST00000410804 POTEB3A0JP26 581 aa8.57□□□□□ -1.04
RNU4-6P-201ENST00000410804 POTEBQ6S5H4 581 aa8.57□□□□□ -1.04
RNU4-6P-201ENST00000410804 TMEM92Q6UXU6 159 aa8.57□□□□□ -1.04
RNU4-6P-201ENST00000410804 STK25O00506 426 aa8.56□□□□□ -1.04
RNU4-6P-201ENST00000410804 NLRP6P59044 892 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms