RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 CCDC61Q9Y6R9 512 aa10.72□□□□□ -0.69
RNU4-55P-201ENST00000410731 GABBR2O75899 941 aa10.71□□□□□ -0.69
RNU4-55P-201ENST00000410731 SPOCK2Q92563 424 aa10.71□□□□□ -0.69
RNU4-55P-201ENST00000410731 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
RNU4-55P-201ENST00000410731 GSE1Q14687 1217 aa10.63□□□□□ -0.71
RNU4-55P-201ENST00000410731 DCAF8Q5TAQ9 597 aa10.63□□□□□ -0.71
RNU4-55P-201ENST00000410731 KIF12Q96FN5 646 aa10.62□□□□□ -0.71
RNU4-55P-201ENST00000410731 GALR2O43603 387 aaPredicted RBP10.6□□□□□ -0.71
RNU4-55P-201ENST00000410731 MS4A3Q96HJ5 214 aa10.59□□□□□ -0.71
RNU4-55P-201ENST00000410731 MAP3K13O43283 966 aa10.57□□□□□ -0.72
RNU4-55P-201ENST00000410731 SGIP1Q9BQI5 828 aa10.55□□□□□ -0.72
RNU4-55P-201ENST00000410731 CIZ1Q9ULV3 898 aaPredicted RBP10.55□□□□□ -0.72
RNU4-55P-201ENST00000410731 PYGBP11216 843 aa10.54□□□□□ -0.72
RNU4-55P-201ENST00000410731 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.73
RNU4-55P-201ENST00000410731 CHRM1P11229 460 aaPredicted RBP10.51□□□□□ -0.73
RNU4-55P-201ENST00000410731 DCBLD2Q96PD2 775 aa10.51□□□□□ -0.73
RNU4-55P-201ENST00000410731 POTEIP0CG38 1075 aa10.49□□□□□ -0.73
RNU4-55P-201ENST00000410731 TRIM41Q8WV44 630 aa10.49□□□□□ -0.73
RNU4-55P-201ENST00000410731 IFNL1Q8IU54 200 aa10.47□□□□□ -0.73
RNU4-55P-201ENST00000410731 TRPC6Q9Y210 931 aa10.45□□□□□ -0.74
RNU4-55P-201ENST00000410731 TIE1P35590 1138 aa10.44□□□□□ -0.74
RNU4-55P-201ENST00000410731 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
RNU4-55P-201ENST00000410731 ZNF467Q7Z7K2 595 aaPredicted RBP10.43□□□□□ -0.74
RNU4-55P-201ENST00000410731 ATMINO43313 823 aaPredicted RBP10.42□□□□□ -0.74
RNU4-55P-201ENST00000410731 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
RNU4-55P-201ENST00000410731 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
RNU4-55P-201ENST00000410731 TTLL13PA6NNM8 815 aa10.38□□□□□ -0.75
RNU4-55P-201ENST00000410731 ATN1P54259 1190 aaPredicted RBP10.36□□□□□ -0.75
RNU4-55P-201ENST00000410731 PKD2Q13563 968 aa10.36□□□□□ -0.75
RNU4-55P-201ENST00000410731 PELP1Q8IZL8 1130 aaKnown RBP10.35□□□□□ -0.75
RNU4-55P-201ENST00000410731 TMEM106CQ9BVX2 250 aa10.35□□□□□ -0.75
RNU4-55P-201ENST00000410731 ECM2O94769 699 aaPredicted RBP10.32□□□□□ -0.76
RNU4-55P-201ENST00000410731 PDAP1Q13442 181 aaKnown RBP10.32□□□□□ -0.76
RNU4-55P-201ENST00000410731 SLC39A7Q92504 469 aa10.32□□□□□ -0.76
RNU4-55P-201ENST00000410731 RNF25Q96BH1 459 aaPredicted RBP10.32□□□□□ -0.76
RNU4-55P-201ENST00000410731 RIOK3O14730 519 aaKnown RBP10.31□□□□□ -0.76
RNU4-55P-201ENST00000410731 PSEN1P49768 467 aa10.31□□□□□ -0.76
RNU4-55P-201ENST00000410731 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
RNU4-55P-201ENST00000410731 C7P10643 843 aa10.29□□□□□ -0.76
RNU4-55P-201ENST00000410731 METRNQ9UJH8 293 aa10.29□□□□□ -0.76
RNU4-55P-201ENST00000410731 IER5LQ5T953 404 aa10.26□□□□□ -0.77
RNU4-55P-201ENST00000410731 VGFO15240 615 aaPredicted RBP10.25□□□□□ -0.77
RNU4-55P-201ENST00000410731 RGL2O15211 777 aa10.23□□□□□ -0.77
RNU4-55P-201ENST00000410731 TAOK2Q9UL54 1235 aa10.23□□□□□ -0.77
RNU4-55P-201ENST00000410731 LHX8Q68G74 356 aa10.21□□□□□ -0.77
RNU4-55P-201ENST00000410731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.2□□□□□ -0.78
RNU4-55P-201ENST00000410731 ZFP91Q96JP5 570 aaPredicted RBP10.2□□□□□ -0.78
RNU4-55P-201ENST00000410731 GOLGA2Q08379 1002 aa10.19□□□□□ -0.78
RNU4-55P-201ENST00000410731 POTEFA5A3E0 1075 aa10.18□□□□□ -0.78
RNU4-55P-201ENST00000410731 SEC24BO95487 1268 aa10.17□□□□□ -0.78
RNU4-55P-201ENST00000410731 IRX5P78411 483 aaPredicted RBP10.17□□□□□ -0.78
RNU4-55P-201ENST00000410731 CABP2Q9NPB3 220 aa10.17□□□□□ -0.78
RNU4-55P-201ENST00000410731 COLQQ9Y215 455 aaPredicted RBP10.17□□□□□ -0.78
RNU4-55P-201ENST00000410731 MKRN3Q13064 507 aaKnown RBP10.16□□□□□ -0.78
RNU4-55P-201ENST00000410731 POTEB2H3BUK9 544 aa10.15□□□□□ -0.78
RNU4-55P-201ENST00000410731 PLCG2P16885 1265 aa10.14□□□□□ -0.79
RNU4-55P-201ENST00000410731 AMER1Q5JTC6 1135 aaPredicted RBP10.13□□□□□ -0.79
RNU4-55P-201ENST00000410731 BCL11BQ9C0K0 894 aaPredicted RBP10.12□□□□□ -0.79
RNU4-55P-201ENST00000410731 OCEL1Q9H607 264 aa10.12□□□□□ -0.79
RNU4-55P-201ENST00000410731 STK25O00506 426 aa10.11□□□□□ -0.79
RNU4-55P-201ENST00000410731 ILDR1Q86SU0 546 aaPredicted RBP10.1□□□□□ -0.79
RNU4-55P-201ENST00000410731 EFCAB3Q8N7B9 438 aa10.1□□□□□ -0.79
RNU4-55P-201ENST00000410731 PDCD7Q8N8D1 485 aaKnown RBP10.09□□□□□ -0.79
RNU4-55P-201ENST00000410731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.09□□□□□ -0.79
RNU4-55P-201ENST00000410731 STK24Q9Y6E0 443 aa10.09□□□□□ -0.79
RNU4-55P-201ENST00000410731 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
RNU4-55P-201ENST00000410731 SOX12O15370 315 aa10.05□□□□□ -0.8
RNU4-55P-201ENST00000410731 MAMSTRQ6ZN01 415 aa10.05□□□□□ -0.8
RNU4-55P-201ENST00000410731 HS6ST3Q8IZP7 471 aa10.05□□□□□ -0.8
RNU4-55P-201ENST00000410731 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
RNU4-55P-201ENST00000410731 OTUD5Q96G74 571 aa10.03□□□□□ -0.8
RNU4-55P-201ENST00000410731 SCUBE2Q9NQ36 999 aa10.02□□□□□ -0.81
RNU4-55P-201ENST00000410731 CHGAP10645 457 aaKnown RBP10□□□□□ -0.81
RNU4-55P-201ENST00000410731 PHF8Q9UPP1 1060 aa10□□□□□ -0.81
RNU4-55P-201ENST00000410731 L3MBTL3Q96JM7 780 aaPredicted RBP9.99□□□□□ -0.81
RNU4-55P-201ENST00000410731 NLRP6P59044 892 aa9.98□□□□□ -0.81
RNU4-55P-201ENST00000410731 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
RNU4-55P-201ENST00000410731 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
RNU4-55P-201ENST00000410731 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
RNU4-55P-201ENST00000410731 MS4A4AQ96JQ5 239 aa9.97□□□□□ -0.81
RNU4-55P-201ENST00000410731 MFRPQ9BY79 579 aa9.97□□□□□ -0.81
RNU4-55P-201ENST00000410731 DNAJC5Q9H3Z4 198 aa9.97□□□□□ -0.81
RNU4-55P-201ENST00000410731 BOLA1Q9Y3E2 137 aa9.93□□□□□ -0.82
RNU4-55P-201ENST00000410731 G3V3G9 751 aa9.92□□□□□ -0.82
RNU4-55P-201ENST00000410731 C3orf67Q6ZVT6 689 aa9.92□□□□□ -0.82
RNU4-55P-201ENST00000410731 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
RNU4-55P-201ENST00000410731 TMEM121BQ9BXQ6 578 aaPredicted RBP9.9□□□□□ -0.82
RNU4-55P-201ENST00000410731 NKX1-1Q15270 411 aaPredicted RBP9.89□□□□□ -0.83
RNU4-55P-201ENST00000410731 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
RNU4-55P-201ENST00000410731 SLAIN1Q8ND83 568 aa9.87□□□□□ -0.83
RNU4-55P-201ENST00000410731 RYDENQ9NUL5 291 aaKnown RBP9.85□□□□□ -0.83
RNU4-55P-201ENST00000410731 PPP1R37O75864 691 aa9.8□□□□□ -0.84
RNU4-55P-201ENST00000410731 BBXQ8WY36 941 aaPredicted RBP9.78□□□□□ -0.84
RNU4-55P-201ENST00000410731 GTPBP6O43824 516 aaPredicted RBP9.77□□□□□ -0.85
RNU4-55P-201ENST00000410731 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
RNU4-55P-201ENST00000410731 SNPHO15079 494 aa9.73□□□□□ -0.85
RNU4-55P-201ENST00000410731 KIF3CO14782 793 aa9.69□□□□□ -0.86
RNU4-55P-201ENST00000410731 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
RNU4-55P-201ENST00000410731 FAM163AQ96GL9 167 aaPredicted RBP9.69□□□□□ -0.86
RNU4-55P-201ENST00000410731 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms