RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 UPF2Q9HAU5 1272 aaKnown RBP33.62■■■□□ 2.97
SPIRE1-202ENST00000409402 A0A0G2JS52 829 aa33.61■■■□□ 2.97
SPIRE1-202ENST00000409402 HSP90AA1P07900 732 aaKnown RBP33.6■■■□□ 2.97
SPIRE1-202ENST00000409402 ACIN1Q9UKV3 1341 aaKnown RBP33.6■■■□□ 2.97
SPIRE1-202ENST00000409402 KIF27Q86VH2 1401 aa33.59■■■□□ 2.97
SPIRE1-202ENST00000409402 ZBTB7CA1YPR0 619 aa33.58■■■□□ 2.97
SPIRE1-202ENST00000409402 SENP3Q9H4L4 574 aaPredicted RBP33.58■■■□□ 2.97
SPIRE1-202ENST00000409402 CFDP1Q9UEE9 299 aaPredicted RBP33.56■■■□□ 2.96
SPIRE1-202ENST00000409402 FKBP8Q14318 412 aa33.52■■■□□ 2.96
SPIRE1-202ENST00000409402 MRS2Q9HD23 443 aa33.51■■■□□ 2.95
SPIRE1-202ENST00000409402 EIF4G2P78344 907 aaKnown RBP eCLIP33.49■■■□□ 2.95
SPIRE1-202ENST00000409402 PLEKHG5O94827 1062 aa33.49■■■□□ 2.95
SPIRE1-202ENST00000409402 RGL3Q3MIN7 710 aa33.43■■■□□ 2.94
SPIRE1-202ENST00000409402 HAP1P54257 671 aaPredicted RBP33.41■■■□□ 2.94
SPIRE1-202ENST00000409402 CEP162Q5TB80 1403 aa33.4■■■□□ 2.94
SPIRE1-202ENST00000409402 MYH16Q9H6N6 1097 aa33.35■■■□□ 2.93
SPIRE1-202ENST00000409402 ANP32BQ92688 251 aaKnown RBP33.33■■■□□ 2.93
SPIRE1-202ENST00000409402 CCDC136Q96JN2 1154 aa33.32■■■□□ 2.92
SPIRE1-202ENST00000409402 CDCA8Q53HL2 280 aa33.31■■■□□ 2.92
SPIRE1-202ENST00000409402 CEP164Q9UPV0 1460 aa33.3■■■□□ 2.92
SPIRE1-202ENST00000409402 BAZ1AQ9NRL2 1556 aaPredicted RBP33.29■■■□□ 2.92
SPIRE1-202ENST00000409402 HIRIP3Q9BW71 556 aaPredicted RBP33.28■■■□□ 2.92
SPIRE1-202ENST00000409402 CFAP53Q96M91 514 aa33.25■■■□□ 2.91
SPIRE1-202ENST00000409402 TNIKQ9UKE5 1360 aa33.17■■■□□ 2.9
SPIRE1-202ENST00000409402 TRHP20396 242 aaPredicted RBP33.16■■■□□ 2.9
SPIRE1-202ENST00000409402 KNSTRNQ9Y448 316 aa33.16■■■□□ 2.9
SPIRE1-202ENST00000409402 POGKQ9P215 609 aa33.13■■■□□ 2.89
SPIRE1-202ENST00000409402 CARD11Q9BXL7 1154 aa33.12■■■□□ 2.89
SPIRE1-202ENST00000409402 CCNB3Q8WWL7 1395 aa33.12■■■□□ 2.89
SPIRE1-202ENST00000409402 EIF4G1Q04637 1599 aaKnown RBP33.1■■■□□ 2.89
SPIRE1-202ENST00000409402 PPM1GO15355 546 aaPredicted RBP33.09■■■□□ 2.89
SPIRE1-202ENST00000409402 LMOD2Q6P5Q4 547 aa33.04■■■□□ 2.88
SPIRE1-202ENST00000409402 CARMIL1Q5VZK9 1371 aa33.02■■■□□ 2.88
SPIRE1-202ENST00000409402 FHAD1B1AJZ9 1412 aa33.02■■■□□ 2.88
SPIRE1-202ENST00000409402 CUX2O14529 1486 aa33.02■■■□□ 2.88
SPIRE1-202ENST00000409402 KANK1Q14678 1352 aa33.01■■■□□ 2.87
SPIRE1-202ENST00000409402 ARXQ96QS3 562 aa33■■■□□ 2.87
SPIRE1-202ENST00000409402 HDGFP51858 240 aaKnown RBP32.95■■■□□ 2.87
SPIRE1-202ENST00000409402 NUDCQ9Y266 331 aa32.93■■■□□ 2.86
SPIRE1-202ENST00000409402 CECR2Q9BXF3 1484 aa32.92■■■□□ 2.86
SPIRE1-202ENST00000409402 MAPK8IP3Q9UPT6 1336 aa32.92■■■□□ 2.86
SPIRE1-202ENST00000409402 MLECQ14165 292 aa32.91■■■□□ 2.86
SPIRE1-202ENST00000409402 MIER1Q8N108 512 aa32.9■■■□□ 2.86
SPIRE1-202ENST00000409402 PDS5BQ9NTI5 1447 aa32.87■■■□□ 2.85
SPIRE1-202ENST00000409402 IRX6P78412 446 aaPredicted RBP32.85■■■□□ 2.85
SPIRE1-202ENST00000409402 CARMIL2Q6F5E8 1435 aa32.81■■■□□ 2.84
SPIRE1-202ENST00000409402 LAS1LQ9Y4W2 734 aaKnown RBP32.79■■■□□ 2.84
SPIRE1-202ENST00000409402 MYO15BQ96JP2 1530 aa32.77■■■□□ 2.84
SPIRE1-202ENST00000409402 FTSJ3Q8IY81 847 aaKnown RBP32.77■■■□□ 2.84
SPIRE1-202ENST00000409402 NEUROD2Q15784 382 aa32.76■■■□□ 2.83
SPIRE1-202ENST00000409402 SMARCA2P51531 1590 aa32.73■■■□□ 2.83
SPIRE1-202ENST00000409402 TNNT2P45379 298 aaPredicted RBP32.71■■■□□ 2.83
SPIRE1-202ENST00000409402 DCAF11Q8TEB1 546 aa32.71■■■□□ 2.83
SPIRE1-202ENST00000409402 NPHP1O15259 732 aa32.71■■■□□ 2.83
SPIRE1-202ENST00000409402 SIN3AQ96ST3 1273 aa32.71■■■□□ 2.83
SPIRE1-202ENST00000409402 TMF1P82094 1093 aa32.69■■■□□ 2.82
SPIRE1-202ENST00000409402 CDK11BP21127 795 aaKnown RBP32.68■■■□□ 2.82
SPIRE1-202ENST00000409402 PNNQ9H307 717 aaKnown RBP32.68■■■□□ 2.82
SPIRE1-202ENST00000409402 GGT6Q6P531 493 aa32.68■■■□□ 2.82
SPIRE1-202ENST00000409402 CASC1Q6TDU7 716 aa32.66■■■□□ 2.82
SPIRE1-202ENST00000409402 SOGA1O94964 1423 aa32.65■■■□□ 2.82
SPIRE1-202ENST00000409402 BECN1Q14457 450 aa32.65■■■□□ 2.82
SPIRE1-202ENST00000409402 U2SURPO15042 1029 aaKnown RBP32.64■■■□□ 2.82
SPIRE1-202ENST00000409402 SRPK2P78362 688 aaKnown RBP32.63■■■□□ 2.81
SPIRE1-202ENST00000409402 CC2D1BQ5T0F9 858 aaKnown RBP32.63■■■□□ 2.81
SPIRE1-202ENST00000409402 SENP3-EIF4A1A0A087X0R7 540 aa32.62■■■□□ 2.81
SPIRE1-202ENST00000409402 NCLP19338 710 aaKnown RBP32.61■■■□□ 2.81
SPIRE1-202ENST00000409402 EIF5BO60841 1220 aaKnown RBP32.59■■■□□ 2.81
SPIRE1-202ENST00000409402 CCDC88BA6NC98 1476 aa32.57■■■□□ 2.8
SPIRE1-202ENST00000409402 ARHGAP35Q9NRY4 1499 aa32.56■■■□□ 2.8
SPIRE1-202ENST00000409402 DDRGK1Q96HY6 314 aa32.56■■■□□ 2.8
SPIRE1-202ENST00000409402 CHMP4BQ9H444 224 aaKnown RBP32.56■■■□□ 2.8
SPIRE1-202ENST00000409402 TDRD9Q8NDG6 1382 aaKnown RBP32.55■■■□□ 2.8
SPIRE1-202ENST00000409402 EFCAB2Q5VUJ9 269 aa32.54■■■□□ 2.8
SPIRE1-202ENST00000409402 NBR1Q14596 966 aa32.53■■■□□ 2.8
SPIRE1-202ENST00000409402 SAFB2Q14151 953 aaKnown RBP eCLIP32.5■■■□□ 2.79
SPIRE1-202ENST00000409402 SOX12O15370 315 aa32.49■■■□□ 2.79
SPIRE1-202ENST00000409402 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
SPIRE1-202ENST00000409402 MS4A1P11836 297 aa32.48■■■□□ 2.79
SPIRE1-202ENST00000409402 FRAT1Q92837 279 aaPredicted RBP32.47■■■□□ 2.79
SPIRE1-202ENST00000409402 GOLGA6L22H0YM25 854 aa32.46■■■□□ 2.79
SPIRE1-202ENST00000409402 OS9Q13438 667 aaPredicted RBP32.46■■■□□ 2.79
SPIRE1-202ENST00000409402 PKD2Q13563 968 aa32.44■■■□□ 2.78
SPIRE1-202ENST00000409402 MORC1Q86VD1 984 aa32.44■■■□□ 2.78
SPIRE1-202ENST00000409402 STK26Q9P289 416 aa32.44■■■□□ 2.78
SPIRE1-202ENST00000409402 FMN1Q68DA7 1419 aa32.43■■■□□ 2.78
SPIRE1-202ENST00000409402 TIMELESSQ9UNS1 1208 aa32.41■■■□□ 2.78
SPIRE1-202ENST00000409402 HDGFL2Q7Z4V5 671 aaPredicted RBP32.41■■■□□ 2.78
SPIRE1-202ENST00000409402 SETD5Q9C0A6 1442 aa32.39■■■□□ 2.78
SPIRE1-202ENST00000409402 ZRSR1Q15695 479 aaKnown RBP32.37■■■□□ 2.77
SPIRE1-202ENST00000409402 VPS8Q8N3P4 1428 aa32.36■■■□□ 2.77
SPIRE1-202ENST00000409402 SUPT16HQ9Y5B9 1047 aaKnown RBP32.35■■■□□ 2.77
SPIRE1-202ENST00000409402 GOLGA2Q08379 1002 aa32.35■■■□□ 2.77
SPIRE1-202ENST00000409402 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
SPIRE1-202ENST00000409402 ANKRD30AQ9BXX3 1397 aa32.33■■■□□ 2.77
SPIRE1-202ENST00000409402 RTF1Q92541 710 aaKnown RBP32.32■■■□□ 2.76
SPIRE1-202ENST00000409402 ANP32EQ9BTT0 268 aa32.31■■■□□ 2.76
SPIRE1-202ENST00000409402 CADPSQ9ULU8 1353 aa32.31■■■□□ 2.76
SPIRE1-202ENST00000409402 PAK3O75914 559 aaPredicted RBP32.29■■■□□ 2.76
SPIRE1-202ENST00000409402 NUP155O75694 1391 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms