RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 RNF216Q9NWF9 866 aaPredicted RBP7.03□□□□□ -1.28
GTDC1-206ENST00000409214 SPDYE4A6NLX3 237 aa6.99□□□□□ -1.29
GTDC1-206ENST00000409214 SAMD1Q6SPF0 538 aaPredicted RBP6.99□□□□□ -1.29
GTDC1-206ENST00000409214 ZMYND15Q9H091 742 aa6.99□□□□□ -1.29
GTDC1-206ENST00000409214 LMOD2Q6P5Q4 547 aa6.98□□□□□ -1.29
GTDC1-206ENST00000409214 PROM2Q8N271 834 aa6.96□□□□□ -1.3
GTDC1-206ENST00000409214 ZBTB7CA1YPR0 619 aa6.96□□□□□ -1.3
GTDC1-206ENST00000409214 RSPH6AQ9H0K4 717 aa6.96□□□□□ -1.3
GTDC1-206ENST00000409214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.95□□□□□ -1.3
GTDC1-206ENST00000409214 DHX37Q8IY37 1157 aaKnown RBP6.94□□□□□ -1.3
GTDC1-206ENST00000409214 SLC24A3Q9HC58 644 aa6.94□□□□□ -1.3
GTDC1-206ENST00000409214 NKX1-1Q15270 411 aaPredicted RBP6.94□□□□□ -1.3
GTDC1-206ENST00000409214 SHROOM4Q9ULL8 1493 aa6.93□□□□□ -1.3
GTDC1-206ENST00000409214 PDIA4P13667 645 aaKnown RBP6.93□□□□□ -1.3
GTDC1-206ENST00000409214 CDK11BP21127 795 aaKnown RBP6.92□□□□□ -1.3
GTDC1-206ENST00000409214 CDK11AQ9UQ88 783 aaPredicted RBP6.92□□□□□ -1.3
GTDC1-206ENST00000409214 APBB1O00213 710 aa6.91□□□□□ -1.3
GTDC1-206ENST00000409214 FOXD4L5Q5VV16 416 aaPredicted RBP6.91□□□□□ -1.3
GTDC1-206ENST00000409214 FOXD4L4Q8WXT5 416 aaPredicted RBP6.91□□□□□ -1.3
GTDC1-206ENST00000409214 KCTD17Q8N5Z5 321 aa6.9□□□□□ -1.3
GTDC1-206ENST00000409214 MTMR7Q9Y216 660 aa6.9□□□□□ -1.31
GTDC1-206ENST00000409214 RAD21O60216 631 aa6.89□□□□□ -1.31
GTDC1-206ENST00000409214 MKRN4PQ13434 485 aaPredicted RBP6.87□□□□□ -1.31
GTDC1-206ENST00000409214 RGS22Q8NE09 1264 aa6.87□□□□□ -1.31
GTDC1-206ENST00000409214 GPBP1L1Q9HC44 474 aaPredicted RBP6.87□□□□□ -1.31
GTDC1-206ENST00000409214 ZC3H15Q8WU90 426 aaKnown RBP6.86□□□□□ -1.31
GTDC1-206ENST00000409214 SPOCK2Q92563 424 aa6.86□□□□□ -1.31
GTDC1-206ENST00000409214 RBM25P49756 843 aaKnown RBP6.84□□□□□ -1.31
GTDC1-206ENST00000409214 KCNV2Q8TDN2 545 aa6.84□□□□□ -1.31
GTDC1-206ENST00000409214 TRIM41Q8WV44 630 aa6.84□□□□□ -1.31
GTDC1-206ENST00000409214 GTPBP6O43824 516 aaPredicted RBP6.83□□□□□ -1.32
GTDC1-206ENST00000409214 MKRN3Q13064 507 aaKnown RBP6.83□□□□□ -1.32
GTDC1-206ENST00000409214 POTEHQ6S545 545 aa6.83□□□□□ -1.32
GTDC1-206ENST00000409214 IL27Q8NEV9 243 aa6.83□□□□□ -1.32
GTDC1-206ENST00000409214 CCDC82Q8N4S0 544 aa6.82□□□□□ -1.32
GTDC1-206ENST00000409214 HSP90B1P14625 803 aaKnown RBP6.81□□□□□ -1.32
GTDC1-206ENST00000409214 RNF25Q96BH1 459 aaPredicted RBP6.81□□□□□ -1.32
GTDC1-206ENST00000409214 AEBP1Q8IUX7 1158 aa6.8□□□□□ -1.32
GTDC1-206ENST00000409214 HS6ST3Q8IZP7 471 aa6.78□□□□□ -1.32
GTDC1-206ENST00000409214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.78□□□□□ -1.32
GTDC1-206ENST00000409214 PUS7Q96PZ0 661 aaKnown RBP6.76□□□□□ -1.33
GTDC1-206ENST00000409214 CIZ1Q9ULV3 898 aaPredicted RBP6.73□□□□□ -1.33
GTDC1-206ENST00000409214 MFAP1P55081 439 aaKnown RBP6.72□□□□□ -1.33
GTDC1-206ENST00000409214 CLUAP1Q96AJ1 413 aa6.72□□□□□ -1.33
GTDC1-206ENST00000409214 CADPS2Q86UW7 1296 aa6.71□□□□□ -1.34
GTDC1-206ENST00000409214 USP35Q9P2H5 1018 aa6.7□□□□□ -1.34
GTDC1-206ENST00000409214 FAM9AQ8IZU1 332 aaPredicted RBP6.7□□□□□ -1.34
GTDC1-206ENST00000409214 UBE2Q2Q8WVN8 375 aa6.7□□□□□ -1.34
GTDC1-206ENST00000409214 ZNF692Q9BU19 519 aaPredicted RBP6.7□□□□□ -1.34
GTDC1-206ENST00000409214 ZNF219Q9P2Y4 722 aaPredicted RBP6.7□□□□□ -1.34
GTDC1-206ENST00000409214 GZF1Q9H116 711 aaPredicted RBP6.69□□□□□ -1.34
GTDC1-206ENST00000409214 SEMA3EO15041 775 aa6.69□□□□□ -1.34
GTDC1-206ENST00000409214 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
GTDC1-206ENST00000409214 TMCO4Q5TGY1 634 aa6.68□□□□□ -1.34
GTDC1-206ENST00000409214 BRD2P25440 801 aaKnown RBP6.66□□□□□ -1.34
GTDC1-206ENST00000409214 ZMYND10O75800 440 aa6.66□□□□□ -1.34
GTDC1-206ENST00000409214 HMGB1P09429 215 aaKnown RBP6.66□□□□□ -1.34
GTDC1-206ENST00000409214 IRF5Q13568 498 aa6.66□□□□□ -1.34
GTDC1-206ENST00000409214 P3H3Q8IVL6 736 aa6.66□□□□□ -1.34
GTDC1-206ENST00000409214 WDR70Q9NW82 654 aa6.66□□□□□ -1.34
GTDC1-206ENST00000409214 FAM177A1Q8N128 213 aaPredicted RBP6.66□□□□□ -1.34
GTDC1-206ENST00000409214 U3KPZ7 1027 aaPredicted RBP6.66□□□□□ -1.34
GTDC1-206ENST00000409214 POLA2Q14181 598 aa6.65□□□□□ -1.35
GTDC1-206ENST00000409214 KDM4CQ9H3R0 1056 aa6.65□□□□□ -1.35
GTDC1-206ENST00000409214 RETREG2Q8NC44 543 aa6.63□□□□□ -1.35
GTDC1-206ENST00000409214 TRAIPQ9BWF2 469 aa6.63□□□□□ -1.35
GTDC1-206ENST00000409214 DSG3P32926 999 aa6.61□□□□□ -1.35
GTDC1-206ENST00000409214 FAM117AQ9C073 453 aa6.61□□□□□ -1.35
GTDC1-206ENST00000409214 ZNF777Q9ULD5 760 aaPredicted RBP6.6□□□□□ -1.35
GTDC1-206ENST00000409214 CAPN15O75808 1086 aa6.6□□□□□ -1.35
GTDC1-206ENST00000409214 PLCD3Q8N3E9 789 aa6.6□□□□□ -1.35
GTDC1-206ENST00000409214 IRX6P78412 446 aaPredicted RBP6.59□□□□□ -1.35
GTDC1-206ENST00000409214 CWC22Q9HCG8 908 aaKnown RBP6.59□□□□□ -1.35
GTDC1-206ENST00000409214 STK25O00506 426 aa6.58□□□□□ -1.36
GTDC1-206ENST00000409214 TRAK2O60296 914 aa6.58□□□□□ -1.36
GTDC1-206ENST00000409214 ONECUT3O60422 494 aaPredicted RBP6.58□□□□□ -1.36
GTDC1-206ENST00000409214 PDE4CQ08493 712 aa6.58□□□□□ -1.36
GTDC1-206ENST00000409214 E9PSI1 815 aa6.58□□□□□ -1.36
GTDC1-206ENST00000409214 BRPF3Q9ULD4 1205 aa6.56□□□□□ -1.36
GTDC1-206ENST00000409214 ZNF316A6NFI3 1004 aaPredicted RBP6.56□□□□□ -1.36
GTDC1-206ENST00000409214 TESPA1A2RU30 521 aaPredicted RBP6.55□□□□□ -1.36
GTDC1-206ENST00000409214 SPINK5Q9NQ38 1064 aaPredicted RBP6.55□□□□□ -1.36
GTDC1-206ENST00000409214 PLEKHG3A1L390 1219 aa6.54□□□□□ -1.36
GTDC1-206ENST00000409214 PPM1GO15355 546 aaPredicted RBP6.54□□□□□ -1.36
GTDC1-206ENST00000409214 FBXW7Q969H0 707 aa6.54□□□□□ -1.36
GTDC1-206ENST00000409214 BARGINQ6ZT62 677 aa6.53□□□□□ -1.36
GTDC1-206ENST00000409214 UNCXA6NJT0 531 aa6.52□□□□□ -1.37
GTDC1-206ENST00000409214 MIER1Q8N108 512 aa6.52□□□□□ -1.37
GTDC1-206ENST00000409214 ZFP91Q96JP5 570 aaPredicted RBP6.52□□□□□ -1.37
GTDC1-206ENST00000409214 POM121Q96HA1 1249 aa6.52□□□□□ -1.37
GTDC1-206ENST00000409214 CARNS1A5YM72 827 aa6.51□□□□□ -1.37
GTDC1-206ENST00000409214 TMED8Q6PL24 325 aaPredicted RBP6.51□□□□□ -1.37
GTDC1-206ENST00000409214 PDE4DQ08499 809 aa6.5□□□□□ -1.37
GTDC1-206ENST00000409214 RBM26Q5T8P6 1007 aaKnown RBP6.48□□□□□ -1.37
GTDC1-206ENST00000409214 AK7Q96M32 723 aa6.48□□□□□ -1.37
GTDC1-206ENST00000409214 TRIM66O15016 1216 aa6.48□□□□□ -1.37
GTDC1-206ENST00000409214 CERS3Q8IU89 383 aa6.48□□□□□ -1.37
GTDC1-206ENST00000409214 BCL11BQ9C0K0 894 aaPredicted RBP6.48□□□□□ -1.37
GTDC1-206ENST00000409214 TAF7LQ5H9L4 462 aa6.48□□□□□ -1.37
GTDC1-206ENST00000409214 RIOK3O14730 519 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms