RNA–Protein interactions for RNA: ENST00000408667.1

MIR548F1-201, Transcript of microRNA 548f-1, humanhuman

BASIC

Gene MIR548F1, Length 84 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F1-201ENST00000408667 LHX8Q68G74 356 aa12.36□□□□□ -0.43
MIR548F1-201ENST00000408667 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
MIR548F1-201ENST00000408667 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
MIR548F1-201ENST00000408667 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
MIR548F1-201ENST00000408667 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
MIR548F1-201ENST00000408667 NUBP1P53384 320 aa12.28□□□□□ -0.44
MIR548F1-201ENST00000408667 VASPP50552 380 aaPredicted RBP12.26□□□□□ -0.45
MIR548F1-201ENST00000408667 ASTLQ6HA08 431 aaPredicted RBP12.23□□□□□ -0.45
MIR548F1-201ENST00000408667 KLHL34Q8N239 644 aa12.23□□□□□ -0.45
MIR548F1-201ENST00000408667 MAP3K13O43283 966 aa12.22□□□□□ -0.45
MIR548F1-201ENST00000408667 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
MIR548F1-201ENST00000408667 ATMINO43313 823 aaPredicted RBP12.2□□□□□ -0.46
MIR548F1-201ENST00000408667 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
MIR548F1-201ENST00000408667 SLC39A7Q92504 469 aa12.18□□□□□ -0.46
MIR548F1-201ENST00000408667 TIE1P35590 1138 aa12.17□□□□□ -0.46
MIR548F1-201ENST00000408667 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
MIR548F1-201ENST00000408667 C7P10643 843 aa12.16□□□□□ -0.46
MIR548F1-201ENST00000408667 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
MIR548F1-201ENST00000408667 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
MIR548F1-201ENST00000408667 GSE1Q14687 1217 aa12.12□□□□□ -0.47
MIR548F1-201ENST00000408667 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
MIR548F1-201ENST00000408667 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
MIR548F1-201ENST00000408667 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
MIR548F1-201ENST00000408667 TTLL13PA6NNM8 815 aa12.05□□□□□ -0.48
MIR548F1-201ENST00000408667 IFNL1Q8IU54 200 aa12.05□□□□□ -0.48
MIR548F1-201ENST00000408667 PYGBP11216 843 aa12.04□□□□□ -0.48
MIR548F1-201ENST00000408667 SPOCK2Q92563 424 aa12.02□□□□□ -0.49
MIR548F1-201ENST00000408667 MAMSTRQ6ZN01 415 aa12.01□□□□□ -0.49
MIR548F1-201ENST00000408667 POTEB2H3BUK9 544 aa12□□□□□ -0.49
MIR548F1-201ENST00000408667 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
MIR548F1-201ENST00000408667 IER5LQ5T953 404 aa11.99□□□□□ -0.49
MIR548F1-201ENST00000408667 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
MIR548F1-201ENST00000408667 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
MIR548F1-201ENST00000408667 SEC24BO95487 1268 aa11.98□□□□□ -0.49
MIR548F1-201ENST00000408667 ZNF467Q7Z7K2 595 aaPredicted RBP11.97□□□□□ -0.49
MIR548F1-201ENST00000408667 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
MIR548F1-201ENST00000408667 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
MIR548F1-201ENST00000408667 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
MIR548F1-201ENST00000408667 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
MIR548F1-201ENST00000408667 PCDHB8Q9UN66 801 aa11.91□□□□□ -0.5
MIR548F1-201ENST00000408667 POTEFA5A3E0 1075 aa11.87□□□□□ -0.51
MIR548F1-201ENST00000408667 PLCG2P16885 1265 aa11.86□□□□□ -0.51
MIR548F1-201ENST00000408667 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
MIR548F1-201ENST00000408667 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
MIR548F1-201ENST00000408667 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
MIR548F1-201ENST00000408667 POTEJP0CG39 1038 aa11.84□□□□□ -0.51
MIR548F1-201ENST00000408667 PSEN1P49768 467 aa11.79□□□□□ -0.52
MIR548F1-201ENST00000408667 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
MIR548F1-201ENST00000408667 MKRN3Q13064 507 aaKnown RBP11.79□□□□□ -0.52
MIR548F1-201ENST00000408667 PDAP1Q13442 181 aaKnown RBP11.79□□□□□ -0.52
MIR548F1-201ENST00000408667 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
MIR548F1-201ENST00000408667 SLAIN1Q8ND83 568 aa11.66□□□□□ -0.54
MIR548F1-201ENST00000408667 L3MBTL3Q96JM7 780 aaPredicted RBP11.66□□□□□ -0.54
MIR548F1-201ENST00000408667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.54
MIR548F1-201ENST00000408667 CABP2Q9NPB3 220 aa11.65□□□□□ -0.54
MIR548F1-201ENST00000408667 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
MIR548F1-201ENST00000408667 POTEMA6NI47 508 aa11.63□□□□□ -0.55
MIR548F1-201ENST00000408667 FAM163AQ96GL9 167 aaPredicted RBP11.63□□□□□ -0.55
MIR548F1-201ENST00000408667 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
MIR548F1-201ENST00000408667 RIOK3O14730 519 aaKnown RBP11.61□□□□□ -0.55
MIR548F1-201ENST00000408667 TAOK2Q9UL54 1235 aa11.61□□□□□ -0.55
MIR548F1-201ENST00000408667 POTEGQ6S5H5 508 aa11.6□□□□□ -0.55
MIR548F1-201ENST00000408667 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
MIR548F1-201ENST00000408667 G3V3G9 751 aa11.59□□□□□ -0.55
MIR548F1-201ENST00000408667 VGFO15240 615 aaPredicted RBP11.57□□□□□ -0.56
MIR548F1-201ENST00000408667 SNPHO15079 494 aa11.55□□□□□ -0.56
MIR548F1-201ENST00000408667 ILDR1Q86SU0 546 aaPredicted RBP11.55□□□□□ -0.56
MIR548F1-201ENST00000408667 PCDH10Q9P2E7 1040 aa11.54□□□□□ -0.56
MIR548F1-201ENST00000408667 EFCAB3Q8N7B9 438 aa11.51□□□□□ -0.57
MIR548F1-201ENST00000408667 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
MIR548F1-201ENST00000408667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.5□□□□□ -0.57
MIR548F1-201ENST00000408667 ZFP91Q96JP5 570 aaPredicted RBP11.5□□□□□ -0.57
MIR548F1-201ENST00000408667 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
MIR548F1-201ENST00000408667 SOX12O15370 315 aa11.48□□□□□ -0.57
MIR548F1-201ENST00000408667 ECM2O94769 699 aaPredicted RBP11.48□□□□□ -0.57
MIR548F1-201ENST00000408667 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
MIR548F1-201ENST00000408667 DPY19L2Q6NUT2 758 aa11.45□□□□□ -0.58
MIR548F1-201ENST00000408667 ST18O60284 1047 aa11.43□□□□□ -0.58
MIR548F1-201ENST00000408667 TMEM121BQ9BXQ6 578 aaPredicted RBP11.43□□□□□ -0.58
MIR548F1-201ENST00000408667 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
MIR548F1-201ENST00000408667 BCL11BQ9C0K0 894 aaPredicted RBP11.4□□□□□ -0.58
MIR548F1-201ENST00000408667 STK24Q9Y6E0 443 aa11.39□□□□□ -0.59
MIR548F1-201ENST00000408667 STK25O00506 426 aa11.37□□□□□ -0.59
MIR548F1-201ENST00000408667 NLRP6P59044 892 aa11.36□□□□□ -0.59
MIR548F1-201ENST00000408667 PKD2Q13563 968 aa11.36□□□□□ -0.59
MIR548F1-201ENST00000408667 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
MIR548F1-201ENST00000408667 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
MIR548F1-201ENST00000408667 RGL2O15211 777 aa11.31□□□□□ -0.6
MIR548F1-201ENST00000408667 CDAN1Q8IWY9 1227 aa11.31□□□□□ -0.6
MIR548F1-201ENST00000408667 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
MIR548F1-201ENST00000408667 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
MIR548F1-201ENST00000408667 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
MIR548F1-201ENST00000408667 RIMBP2O15034 1052 aa11.26□□□□□ -0.61
MIR548F1-201ENST00000408667 EMP3P54852 163 aa11.25□□□□□ -0.61
MIR548F1-201ENST00000408667 FBXO22Q8NEZ5 403 aa11.25□□□□□ -0.61
MIR548F1-201ENST00000408667 MARVELD3Q96A59 401 aa11.25□□□□□ -0.61
MIR548F1-201ENST00000408667 MFRPQ9BY79 579 aa11.23□□□□□ -0.61
MIR548F1-201ENST00000408667 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
MIR548F1-201ENST00000408667 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
MIR548F1-201ENST00000408667 ZSWIM6Q9HCJ5 1215 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms