RNA–Protein interactions for RNA: ENST00000407630.1

SSR1P1-201, Transcript of signal sequence receptor subunit 1 pseudogene 1, humanhuman

BASIC

Gene SSR1P1, Length 814 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P1-201ENST00000407630 NUBP1P53384 320 aa20.11■□□□□ 0.81
SSR1P1-201ENST00000407630 RIOK3O14730 519 aaKnown RBP20.08■□□□□ 0.81
SSR1P1-201ENST00000407630 DCAF8Q5TAQ9 597 aa20.04■□□□□ 0.8
SSR1P1-201ENST00000407630 GTPBP6O43824 516 aaPredicted RBP20.03■□□□□ 0.8
SSR1P1-201ENST00000407630 POTEDQ86YR6 584 aa19.95■□□□□ 0.78
SSR1P1-201ENST00000407630 STK25O00506 426 aa19.94■□□□□ 0.78
SSR1P1-201ENST00000407630 VGFO15240 615 aaPredicted RBP19.91■□□□□ 0.78
SSR1P1-201ENST00000407630 FAM212AQ96EL1 285 aa19.9■□□□□ 0.78
SSR1P1-201ENST00000407630 SPDYE1Q8NFV5 336 aaPredicted RBP19.84■□□□□ 0.77
SSR1P1-201ENST00000407630 CHRM1P11229 460 aaPredicted RBP19.82■□□□□ 0.76
SSR1P1-201ENST00000407630 CREBZFQ9NS37 354 aa19.8■□□□□ 0.76
SSR1P1-201ENST00000407630 SGIP1Q9BQI5 828 aa19.78■□□□□ 0.76
SSR1P1-201ENST00000407630 MNX1P50219 401 aaPredicted RBP19.77■□□□□ 0.76
SSR1P1-201ENST00000407630 BCL11BQ9C0K0 894 aaPredicted RBP19.75■□□□□ 0.75
SSR1P1-201ENST00000407630 STK24Q9Y6E0 443 aa19.75■□□□□ 0.75
SSR1P1-201ENST00000407630 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.73■□□□□ 0.75
SSR1P1-201ENST00000407630 ZFP91Q96JP5 570 aaPredicted RBP19.73■□□□□ 0.75
SSR1P1-201ENST00000407630 RYDENQ9NUL5 291 aaKnown RBP19.73■□□□□ 0.75
SSR1P1-201ENST00000407630 RASEFQ8IZ41 740 aa19.72■□□□□ 0.75
SSR1P1-201ENST00000407630 PRR29P0C7W0 189 aa19.7■□□□□ 0.74
SSR1P1-201ENST00000407630 CLEC11AQ9Y240 323 aa19.7■□□□□ 0.74
SSR1P1-201ENST00000407630 AKT1S1Q96B36 256 aa19.66■□□□□ 0.74
SSR1P1-201ENST00000407630 TIMELESSQ9UNS1 1208 aa19.65■□□□□ 0.74
SSR1P1-201ENST00000407630 TULP1O00294 542 aaPredicted RBP19.62■□□□□ 0.73
SSR1P1-201ENST00000407630 CACNB1Q02641 598 aaPredicted RBP19.62■□□□□ 0.73
SSR1P1-201ENST00000407630 PYGBP11216 843 aa19.6■□□□□ 0.73
SSR1P1-201ENST00000407630 GTF3C3Q9Y5Q9 886 aa19.6■□□□□ 0.73
SSR1P1-201ENST00000407630 RBM42Q9BTD8 480 aaKnown RBP19.59■□□□□ 0.73
SSR1P1-201ENST00000407630 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
SSR1P1-201ENST00000407630 REM2Q8IYK8 340 aaPredicted RBP19.49■□□□□ 0.71
SSR1P1-201ENST00000407630 TMEM132AQ24JP5 1023 aa19.45■□□□□ 0.7
SSR1P1-201ENST00000407630 CADPS2Q86UW7 1296 aa19.41■□□□□ 0.7
SSR1P1-201ENST00000407630 KCNV2Q8TDN2 545 aa19.41■□□□□ 0.7
SSR1P1-201ENST00000407630 WDR70Q9NW82 654 aa19.41■□□□□ 0.7
SSR1P1-201ENST00000407630 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
SSR1P1-201ENST00000407630 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
SSR1P1-201ENST00000407630 ZNF467Q7Z7K2 595 aaPredicted RBP19.34■□□□□ 0.69
SSR1P1-201ENST00000407630 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.33■□□□□ 0.68
SSR1P1-201ENST00000407630 PDAP1Q13442 181 aaKnown RBP19.28■□□□□ 0.68
SSR1P1-201ENST00000407630 PITPNM1O00562 1244 aa19.26■□□□□ 0.67
SSR1P1-201ENST00000407630 TSPYL2Q9H2G4 693 aaPredicted RBP19.24■□□□□ 0.67
SSR1P1-201ENST00000407630 MFRPQ9BY79 579 aa19.18■□□□□ 0.66
SSR1P1-201ENST00000407630 PCDHB8Q9UN66 801 aa19.18■□□□□ 0.66
SSR1P1-201ENST00000407630 PCDHB13Q9Y5F0 798 aa19.18■□□□□ 0.66
SSR1P1-201ENST00000407630 PSEN1P49768 467 aa19.12■□□□□ 0.65
SSR1P1-201ENST00000407630 CHADLQ6NUI6 762 aa19.1■□□□□ 0.65
SSR1P1-201ENST00000407630 ARHGEF1Q92888 912 aaKnown RBP19.1■□□□□ 0.65
SSR1P1-201ENST00000407630 BRPF1P55201 1214 aaPredicted RBP19.07■□□□□ 0.64
SSR1P1-201ENST00000407630 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
SSR1P1-201ENST00000407630 ARXQ96QS3 562 aa19.07■□□□□ 0.64
SSR1P1-201ENST00000407630 ZNF579Q8NAF0 562 aaKnown RBP19.06■□□□□ 0.64
SSR1P1-201ENST00000407630 FARP1Q9Y4F1 1045 aaPredicted RBP19.04■□□□□ 0.64
SSR1P1-201ENST00000407630 PPP1R37O75864 691 aa19.03■□□□□ 0.64
SSR1P1-201ENST00000407630 E2F4Q16254 413 aa19.02■□□□□ 0.64
SSR1P1-201ENST00000407630 ZC3H15Q8WU90 426 aaKnown RBP19.02■□□□□ 0.64
SSR1P1-201ENST00000407630 CCDC61Q9Y6R9 512 aa19.02■□□□□ 0.64
SSR1P1-201ENST00000407630 FBXO22Q8NEZ5 403 aa18.96■□□□□ 0.63
SSR1P1-201ENST00000407630 TESPA1A2RU30 521 aaPredicted RBP18.95■□□□□ 0.62
SSR1P1-201ENST00000407630 NLRP6P59044 892 aa18.95■□□□□ 0.62
SSR1P1-201ENST00000407630 SEMA3EO15041 775 aa18.94■□□□□ 0.62
SSR1P1-201ENST00000407630 EFCAB3Q8N7B9 438 aa18.93■□□□□ 0.62
SSR1P1-201ENST00000407630 SOX12O15370 315 aa18.9■□□□□ 0.62
SSR1P1-201ENST00000407630 NEUROD2Q15784 382 aa18.9■□□□□ 0.62
SSR1P1-201ENST00000407630 PHF8Q9UPP1 1060 aa18.89■□□□□ 0.61
SSR1P1-201ENST00000407630 IFNL1Q8IU54 200 aa18.88■□□□□ 0.61
SSR1P1-201ENST00000407630 SLC24A3Q9HC58 644 aa18.88■□□□□ 0.61
SSR1P1-201ENST00000407630 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
SSR1P1-201ENST00000407630 NCKAP5LQ9HCH0 1330 aa18.8■□□□□ 0.6
SSR1P1-201ENST00000407630 PRKAR2AP13861 404 aaKnown RBP18.78■□□□□ 0.6
SSR1P1-201ENST00000407630 MAP3K13O43283 966 aa18.77■□□□□ 0.6
SSR1P1-201ENST00000407630 LARP6Q9BRS8 491 aaKnown RBP18.77■□□□□ 0.6
SSR1P1-201ENST00000407630 PAK3O75914 559 aaPredicted RBP18.76■□□□□ 0.59
SSR1P1-201ENST00000407630 SMYD5Q6GMV2 418 aa18.75■□□□□ 0.59
SSR1P1-201ENST00000407630 ZMYND10O75800 440 aa18.74■□□□□ 0.59
SSR1P1-201ENST00000407630 KIF12Q96FN5 646 aa18.74■□□□□ 0.59
SSR1P1-201ENST00000407630 PDE4AP27815 886 aa18.73■□□□□ 0.59
SSR1P1-201ENST00000407630 MFSD10Q14728 455 aa18.72■□□□□ 0.59
SSR1P1-201ENST00000407630 HOMEZQ8IX15 550 aa18.72■□□□□ 0.59
SSR1P1-201ENST00000407630 ARIH1Q9Y4X5 557 aaPredicted RBP18.68■□□□□ 0.58
SSR1P1-201ENST00000407630 CRISPLD2Q9H0B8 497 aa18.67■□□□□ 0.58
SSR1P1-201ENST00000407630 MS4A4AQ96JQ5 239 aa18.66■□□□□ 0.58
SSR1P1-201ENST00000407630 DDX27Q96GQ7 796 aaKnown RBP18.64■□□□□ 0.57
SSR1P1-201ENST00000407630 BARGINQ6ZT62 677 aa18.63■□□□□ 0.57
SSR1P1-201ENST00000407630 DAXXQ9UER7 740 aaPredicted RBP18.63■□□□□ 0.57
SSR1P1-201ENST00000407630 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
SSR1P1-201ENST00000407630 CAMK2BQ13554 666 aa18.59■□□□□ 0.57
SSR1P1-201ENST00000407630 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
SSR1P1-201ENST00000407630 AK7Q96M32 723 aa18.51■□□□□ 0.55
SSR1P1-201ENST00000407630 RBM26Q5T8P6 1007 aaKnown RBP18.49■□□□□ 0.55
SSR1P1-201ENST00000407630 GOLGA2Q08379 1002 aa18.48■□□□□ 0.55
SSR1P1-201ENST00000407630 MLLT3P42568 568 aaPredicted RBP18.46■□□□□ 0.55
SSR1P1-201ENST00000407630 GPIHBP1Q8IV16 184 aa18.46■□□□□ 0.55
SSR1P1-201ENST00000407630 GPBP1L1Q9HC44 474 aaPredicted RBP18.44■□□□□ 0.54
SSR1P1-201ENST00000407630 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
SSR1P1-201ENST00000407630 KRI1Q8N9T8 703 aaKnown RBP18.42■□□□□ 0.54
SSR1P1-201ENST00000407630 PHF12Q96QT6 1004 aa18.42■□□□□ 0.54
SSR1P1-201ENST00000407630 TMEM106CQ9BVX2 250 aa18.42■□□□□ 0.54
SSR1P1-201ENST00000407630 PPP1R15BQ5SWA1 713 aa18.38■□□□□ 0.53
SSR1P1-201ENST00000407630 MKRN3Q13064 507 aaKnown RBP18.36■□□□□ 0.53
SSR1P1-201ENST00000407630 CD44P16070 742 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms