RNA–Protein interactions for RNA: ENST00000405640.1

RTL10-202, Transcript of retrotransposon Gag like 10, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL10, Length 6,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL10-202ENST00000405640 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
RTL10-202ENST00000405640 RTN4Q9NQC3 1192 aaKnown RBP17.14■□□□□ 0.33
RTL10-202ENST00000405640 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
RTL10-202ENST00000405640 TULP1O00294 542 aaPredicted RBP17.12■□□□□ 0.33
RTL10-202ENST00000405640 TRIM44Q96DX7 344 aaPredicted RBP17.1■□□□□ 0.33
RTL10-202ENST00000405640 TAOK2Q9UL54 1235 aa17.1■□□□□ 0.33
RTL10-202ENST00000405640 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
RTL10-202ENST00000405640 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
RTL10-202ENST00000405640 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
RTL10-202ENST00000405640 DDRGK1Q96HY6 314 aa17.06■□□□□ 0.32
RTL10-202ENST00000405640 BECN1Q14457 450 aa17.06■□□□□ 0.32
RTL10-202ENST00000405640 SUPT16HQ9Y5B9 1047 aaKnown RBP17.06■□□□□ 0.32
RTL10-202ENST00000405640 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
RTL10-202ENST00000405640 MTUS2Q5JR59 1369 aa17.04■□□□□ 0.32
RTL10-202ENST00000405640 PPM1GO15355 546 aaPredicted RBP17.03■□□□□ 0.32
RTL10-202ENST00000405640 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.322e-6■■■□□ 15.2
RTL10-202ENST00000405640 TSPY4P0CV99 314 aa17.01■□□□□ 0.31
RTL10-202ENST00000405640 TSPY10P0CW01 314 aa17.01■□□□□ 0.31
RTL10-202ENST00000405640 PTMAP06454 111 aaKnown RBP17.01■□□□□ 0.31
RTL10-202ENST00000405640 DNTTIP2Q5QJE6 756 aaKnown RBP17■□□□□ 0.31
RTL10-202ENST00000405640 NEUROD2Q15784 382 aa16.99■□□□□ 0.31
RTL10-202ENST00000405640 KCNH8Q96L42 1107 aa16.98■□□□□ 0.31
RTL10-202ENST00000405640 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
RTL10-202ENST00000405640 NAP1L5Q96NT1 182 aaPredicted RBP16.96■□□□□ 0.3
RTL10-202ENST00000405640 GOLGA6L22H0YM25 854 aa16.94■□□□□ 0.3
RTL10-202ENST00000405640 PPP1R15AO75807 674 aaPredicted RBP16.94■□□□□ 0.3
RTL10-202ENST00000405640 ANP32EQ9BTT0 268 aa16.94■□□□□ 0.3
RTL10-202ENST00000405640 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
RTL10-202ENST00000405640 PLCB2Q00722 1185 aa16.93■□□□□ 0.3
RTL10-202ENST00000405640 RGS3P49796 1198 aa16.93■□□□□ 0.3
RTL10-202ENST00000405640 TNNT2P45379 298 aaPredicted RBP16.93■□□□□ 0.3
RTL10-202ENST00000405640 CLIP1P30622 1438 aa16.9■□□□□ 0.3
RTL10-202ENST00000405640 CHMP7Q8WUX9 453 aaPredicted RBP16.89■□□□□ 0.29
RTL10-202ENST00000405640 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
RTL10-202ENST00000405640 ZRSR1Q15695 479 aaKnown RBP16.89■□□□□ 0.29
RTL10-202ENST00000405640 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
RTL10-202ENST00000405640 CASC1Q6TDU7 716 aa16.88■□□□□ 0.29
RTL10-202ENST00000405640 SPRYD3Q8NCJ5 442 aa16.87■□□□□ 0.29
RTL10-202ENST00000405640 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
RTL10-202ENST00000405640 HAP1P54257 671 aaPredicted RBP16.85■□□□□ 0.29
RTL10-202ENST00000405640 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
RTL10-202ENST00000405640 AMER1Q5JTC6 1135 aaPredicted RBP16.85■□□□□ 0.29
RTL10-202ENST00000405640 B4GALNT3Q6L9W6 998 aa16.84■□□□□ 0.29
RTL10-202ENST00000405640 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
RTL10-202ENST00000405640 HSP90AB1P08238 724 aaKnown RBP16.82■□□□□ 0.28
RTL10-202ENST00000405640 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
RTL10-202ENST00000405640 SIN3AQ96ST3 1273 aa16.82■□□□□ 0.28
RTL10-202ENST00000405640 NOP58Q9Y2X3 529 aaKnown RBP16.82■□□□□ 0.28
RTL10-202ENST00000405640 NAP1L2Q9ULW6 460 aaPredicted RBP16.82■□□□□ 0.28
RTL10-202ENST00000405640 ARID4BQ4LE39 1312 aaPredicted RBP16.79■□□□□ 0.28
RTL10-202ENST00000405640 LMOD2Q6P5Q4 547 aa16.78■□□□□ 0.28
RTL10-202ENST00000405640 CEP162Q5TB80 1403 aa16.78■□□□□ 0.28
RTL10-202ENST00000405640 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.27
RTL10-202ENST00000405640 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
RTL10-202ENST00000405640 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
RTL10-202ENST00000405640 PPP4R2Q9NY27 417 aa16.75■□□□□ 0.27
RTL10-202ENST00000405640 U2SURPO15042 1029 aaKnown RBP16.74■□□□□ 0.27
RTL10-202ENST00000405640 SOX12O15370 315 aa16.72■□□□□ 0.27
RTL10-202ENST00000405640 GOLGA3Q08378 1498 aa16.71■□□□□ 0.27
RTL10-202ENST00000405640 NPHP1O15259 732 aa16.71■□□□□ 0.27
RTL10-202ENST00000405640 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
RTL10-202ENST00000405640 FGD1P98174 961 aa16.7■□□□□ 0.26
RTL10-202ENST00000405640 PLEKHD1A6NEE1 506 aa16.69■□□□□ 0.26
RTL10-202ENST00000405640 KCNJ4P48050 445 aa16.69■□□□□ 0.26
RTL10-202ENST00000405640 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
RTL10-202ENST00000405640 ARID3AQ99856 593 aa16.69■□□□□ 0.26
RTL10-202ENST00000405640 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
RTL10-202ENST00000405640 POGKQ9P215 609 aa16.68■□□□□ 0.26
RTL10-202ENST00000405640 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
RTL10-202ENST00000405640 DEKP35659 375 aaKnown RBP16.66■□□□□ 0.26
RTL10-202ENST00000405640 CDCA8Q53HL2 280 aa16.65■□□□□ 0.26
RTL10-202ENST00000405640 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
RTL10-202ENST00000405640 APBB1O00213 710 aa16.63■□□□□ 0.25
RTL10-202ENST00000405640 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
RTL10-202ENST00000405640 SAFB2Q14151 953 aaKnown RBP eCLIP16.62■□□□□ 0.25
RTL10-202ENST00000405640 GOLGA6L6A8MZA4 724 aa16.62■□□□□ 0.25
RTL10-202ENST00000405640 DRC7Q8IY82 874 aa16.62■□□□□ 0.25
RTL10-202ENST00000405640 CLSTN1O94985 981 aa16.61■□□□□ 0.25
RTL10-202ENST00000405640 MSNP26038 577 aaKnown RBP16.58■□□□□ 0.25
RTL10-202ENST00000405640 GOLGA2Q08379 1002 aa16.58■□□□□ 0.25
RTL10-202ENST00000405640 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
RTL10-202ENST00000405640 GZF1Q9H116 711 aaPredicted RBP16.58■□□□□ 0.24
RTL10-202ENST00000405640 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
RTL10-202ENST00000405640 GOLGA6L4A6NEF3 574 aa16.57■□□□□ 0.24
RTL10-202ENST00000405640 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
RTL10-202ENST00000405640 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
RTL10-202ENST00000405640 ISY1Q9ULR0 285 aaKnown RBP16.53■□□□□ 0.24
RTL10-202ENST00000405640 FOXD1Q16676 465 aa16.53■□□□□ 0.24
RTL10-202ENST00000405640 SRPK2P78362 688 aaKnown RBP16.52■□□□□ 0.24
RTL10-202ENST00000405640 CHAF1AQ13111 956 aaPredicted RBP16.52■□□□□ 0.24
RTL10-202ENST00000405640 MLECQ14165 292 aa16.52■□□□□ 0.23
RTL10-202ENST00000405640 TMF1P82094 1093 aa16.51■□□□□ 0.23
RTL10-202ENST00000405640 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
RTL10-202ENST00000405640 STK26Q9P289 416 aa16.49■□□□□ 0.23
RTL10-202ENST00000405640 MORC1Q86VD1 984 aa16.49■□□□□ 0.23
RTL10-202ENST00000405640 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
RTL10-202ENST00000405640 L1TD1Q5T7N2 865 aaKnown RBP16.48■□□□□ 0.23
RTL10-202ENST00000405640 HSPA5P11021 654 aaKnown RBP16.48■□□□□ 0.23
RTL10-202ENST00000405640 MCCP23508 829 aa16.48■□□□□ 0.23
RTL10-202ENST00000405640 GNL2Q13823 731 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms