RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 PELP1Q8IZL8 1130 aaKnown RBP6.55□□□□□ -1.36
CBX3P9-201ENST00000402326 C7P10643 843 aa6.54□□□□□ -1.36
CBX3P9-201ENST00000402326 PABPN1Q86U42 306 aaKnown RBP eCLIP6.53□□□□□ -1.36
CBX3P9-201ENST00000402326 SLC39A7Q92504 469 aa6.52□□□□□ -1.37
CBX3P9-201ENST00000402326 ST18O60284 1047 aa6.49□□□□□ -1.37
CBX3P9-201ENST00000402326 STAG3Q9UJ98 1225 aa6.47□□□□□ -1.37
CBX3P9-201ENST00000402326 VASPP50552 380 aaPredicted RBP6.46□□□□□ -1.38
CBX3P9-201ENST00000402326 ZRANB1Q9UGI0 708 aa6.46□□□□□ -1.38
CBX3P9-201ENST00000402326 FARP1Q9Y4F1 1045 aaPredicted RBP6.46□□□□□ -1.38
CBX3P9-201ENST00000402326 AMER1Q5JTC6 1135 aaPredicted RBP6.45□□□□□ -1.38
CBX3P9-201ENST00000402326 PRR29P0C7W0 189 aa6.4□□□□□ -1.38
CBX3P9-201ENST00000402326 RTN4Q9NQC3 1192 aaKnown RBP6.4□□□□□ -1.38
CBX3P9-201ENST00000402326 ASTLQ6HA08 431 aaPredicted RBP6.39□□□□□ -1.39
CBX3P9-201ENST00000402326 IFNLR1Q8IU57 520 aaPredicted RBP6.39□□□□□ -1.39
CBX3P9-201ENST00000402326 TMEM121BQ9BXQ6 578 aaPredicted RBP6.39□□□□□ -1.39
CBX3P9-201ENST00000402326 MIER1Q8N108 512 aa6.38□□□□□ -1.39
CBX3P9-201ENST00000402326 PLCD3Q8N3E9 789 aa6.38□□□□□ -1.39
CBX3P9-201ENST00000402326 PLEKHG5O94827 1062 aa6.36□□□□□ -1.39
CBX3P9-201ENST00000402326 KLHL34Q8N239 644 aa6.35□□□□□ -1.39
CBX3P9-201ENST00000402326 ATMINO43313 823 aaPredicted RBP6.32□□□□□ -1.4
CBX3P9-201ENST00000402326 ZBTB47Q9UFB7 747 aaPredicted RBP6.32□□□□□ -1.4
CBX3P9-201ENST00000402326 SPOCK2Q92563 424 aa6.3□□□□□ -1.4
CBX3P9-201ENST00000402326 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
CBX3P9-201ENST00000402326 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
CBX3P9-201ENST00000402326 RNF166Q96A37 237 aaPredicted RBP6.26□□□□□ -1.41
CBX3P9-201ENST00000402326 CREBZFQ9NS37 354 aa6.26□□□□□ -1.41
CBX3P9-201ENST00000402326 MARVELD3Q96A59 401 aa6.25□□□□□ -1.41
CBX3P9-201ENST00000402326 SLAIN1Q8ND83 568 aa6.23□□□□□ -1.41
CBX3P9-201ENST00000402326 PHF12Q96QT6 1004 aa6.23□□□□□ -1.41
CBX3P9-201ENST00000402326 POTEFA5A3E0 1075 aa6.21□□□□□ -1.42
CBX3P9-201ENST00000402326 PKD2Q13563 968 aa6.21□□□□□ -1.42
CBX3P9-201ENST00000402326 MNX1P50219 401 aaPredicted RBP6.2□□□□□ -1.42
CBX3P9-201ENST00000402326 PAK3O75914 559 aaPredicted RBP6.19□□□□□ -1.42
CBX3P9-201ENST00000402326 NPM1P06748 294 aaKnown RBP eCLIP6.19□□□□□ -1.42
CBX3P9-201ENST00000402326 CIZ1Q9ULV3 898 aaPredicted RBP6.19□□□□□ -1.42
CBX3P9-201ENST00000402326 NUBP1P53384 320 aa6.18□□□□□ -1.42
CBX3P9-201ENST00000402326 ECM2O94769 699 aaPredicted RBP6.17□□□□□ -1.42
CBX3P9-201ENST00000402326 GSE1Q14687 1217 aa6.17□□□□□ -1.42
CBX3P9-201ENST00000402326 SNPHO15079 494 aa6.15□□□□□ -1.42
CBX3P9-201ENST00000402326 DCAF8Q5TAQ9 597 aa6.15□□□□□ -1.42
CBX3P9-201ENST00000402326 TRIM41Q8WV44 630 aa6.14□□□□□ -1.43
CBX3P9-201ENST00000402326 FAM212AQ96EL1 285 aa6.14□□□□□ -1.43
CBX3P9-201ENST00000402326 SLC24A1O60721 1099 aa6.13□□□□□ -1.43
CBX3P9-201ENST00000402326 DCAF8L2P0C7V8 631 aa6.13□□□□□ -1.43
CBX3P9-201ENST00000402326 ATN1P54259 1190 aaPredicted RBP6.12□□□□□ -1.43
CBX3P9-201ENST00000402326 EMP3P54852 163 aa6.12□□□□□ -1.43
CBX3P9-201ENST00000402326 RASEFQ8IZ41 740 aa6.12□□□□□ -1.43
CBX3P9-201ENST00000402326 SEC24BO95487 1268 aa6.1□□□□□ -1.43
CBX3P9-201ENST00000402326 MS4A3Q96HJ5 214 aa6.09□□□□□ -1.43
CBX3P9-201ENST00000402326 RGL2O15211 777 aa6.08□□□□□ -1.44
CBX3P9-201ENST00000402326 HS3ST6Q96QI5 342 aa6.08□□□□□ -1.44
CBX3P9-201ENST00000402326 MYT1LQ9UL68 1186 aa6.08□□□□□ -1.44
CBX3P9-201ENST00000402326 TSPYL2Q9H2G4 693 aaPredicted RBP6.07□□□□□ -1.44
CBX3P9-201ENST00000402326 CHRM1P11229 460 aaPredicted RBP6.06□□□□□ -1.44
CBX3P9-201ENST00000402326 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
CBX3P9-201ENST00000402326 POTEB3A0JP26 581 aa6.04□□□□□ -1.44
CBX3P9-201ENST00000402326 FAM205CA6NFA0 338 aa6.04□□□□□ -1.44
CBX3P9-201ENST00000402326 PYGBP11216 843 aa6.04□□□□□ -1.44
CBX3P9-201ENST00000402326 POTEBQ6S5H4 581 aa6.04□□□□□ -1.44
CBX3P9-201ENST00000402326 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
CBX3P9-201ENST00000402326 TAOK2Q9UL54 1235 aa6.03□□□□□ -1.44
CBX3P9-201ENST00000402326 RIOK3O14730 519 aaKnown RBP6.02□□□□□ -1.45
CBX3P9-201ENST00000402326 RNF25Q96BH1 459 aaPredicted RBP6.02□□□□□ -1.45
CBX3P9-201ENST00000402326 COLQQ9Y215 455 aaPredicted RBP6.02□□□□□ -1.45
CBX3P9-201ENST00000402326 PLA2G2EQ9NZK7 142 aa6.01□□□□□ -1.45
CBX3P9-201ENST00000402326 CCDC61Q9Y6R9 512 aa6.01□□□□□ -1.45
CBX3P9-201ENST00000402326 CHGAP10645 457 aaKnown RBP6□□□□□ -1.45
CBX3P9-201ENST00000402326 VGFO15240 615 aaPredicted RBP5.99□□□□□ -1.45
CBX3P9-201ENST00000402326 BBXQ8WY36 941 aaPredicted RBP5.99□□□□□ -1.45
CBX3P9-201ENST00000402326 IRX2Q9BZI1 471 aaPredicted RBP5.99□□□□□ -1.45
CBX3P9-201ENST00000402326 ZNF467Q7Z7K2 595 aaPredicted RBP5.98□□□□□ -1.45
CBX3P9-201ENST00000402326 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.98□□□□□ -1.45
CBX3P9-201ENST00000402326 PLCB2Q00722 1185 aa5.96□□□□□ -1.46
CBX3P9-201ENST00000402326 HS6ST3Q8IZP7 471 aa5.96□□□□□ -1.46
CBX3P9-201ENST00000402326 SGIP1Q9BQI5 828 aa5.96□□□□□ -1.46
CBX3P9-201ENST00000402326 STK25O00506 426 aa5.94□□□□□ -1.46
CBX3P9-201ENST00000402326 KIF12Q96FN5 646 aa5.94□□□□□ -1.46
CBX3P9-201ENST00000402326 PCDHB13Q9Y5F0 798 aa5.94□□□□□ -1.46
CBX3P9-201ENST00000402326 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.93□□□□□ -1.46
CBX3P9-201ENST00000402326 MAP3K13O43283 966 aa5.93□□□□□ -1.46
CBX3P9-201ENST00000402326 PDAP1Q13442 181 aaKnown RBP5.93□□□□□ -1.46
CBX3P9-201ENST00000402326 ZFP91Q96JP5 570 aaPredicted RBP5.93□□□□□ -1.46
CBX3P9-201ENST00000402326 PCDHB8Q9UN66 801 aa5.93□□□□□ -1.46
CBX3P9-201ENST00000402326 PTGER2P43116 358 aa5.92□□□□□ -1.46
CBX3P9-201ENST00000402326 PAXIP1Q6ZW49 1069 aaPredicted RBP5.92□□□□□ -1.46
CBX3P9-201ENST00000402326 DNAJC5Q9H3Z4 198 aa5.92□□□□□ -1.46
CBX3P9-201ENST00000402326 BMP2KQ9NSY1 1161 aaPredicted RBP5.92□□□□□ -1.46
CBX3P9-201ENST00000402326 IFNL1Q8IU54 200 aa5.91□□□□□ -1.46
CBX3P9-201ENST00000402326 SPRYD3Q8NCJ5 442 aa5.91□□□□□ -1.46
CBX3P9-201ENST00000402326 CFAP44Q96MT7 982 aa5.91□□□□□ -1.46
CBX3P9-201ENST00000402326 BCL11BQ9C0K0 894 aaPredicted RBP5.91□□□□□ -1.46
CBX3P9-201ENST00000402326 STK24Q9Y6E0 443 aa5.91□□□□□ -1.46
CBX3P9-201ENST00000402326 PSEN1P49768 467 aa5.9□□□□□ -1.46
CBX3P9-201ENST00000402326 IER5LQ5T953 404 aa5.9□□□□□ -1.46
CBX3P9-201ENST00000402326 HAP1P54257 671 aaPredicted RBP5.88□□□□□ -1.47
CBX3P9-201ENST00000402326 RGS20O76081 388 aa5.86□□□□□ -1.47
CBX3P9-201ENST00000402326 TIE1P35590 1138 aa5.86□□□□□ -1.47
CBX3P9-201ENST00000402326 NKX1-1Q15270 411 aaPredicted RBP5.86□□□□□ -1.47
CBX3P9-201ENST00000402326 RYDENQ9NUL5 291 aaKnown RBP5.85□□□□□ -1.47
CBX3P9-201ENST00000402326 GTPBP6O43824 516 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms