RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 PHF12Q96QT6 1004 aa10.18□□□□□ -0.78
RPA3-203ENST00000401447 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
RPA3-203ENST00000401447 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
RPA3-203ENST00000401447 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
RPA3-203ENST00000401447 PELP1Q8IZL8 1130 aaKnown RBP10.04□□□□□ -0.8
RPA3-203ENST00000401447 MS4A3Q96HJ5 214 aa10.04□□□□□ -0.8
RPA3-203ENST00000401447 TSPYL2Q9H2G4 693 aaPredicted RBP10.04□□□□□ -0.8
RPA3-203ENST00000401447 ASTLQ6HA08 431 aaPredicted RBP10.02□□□□□ -0.81
RPA3-203ENST00000401447 POTEB2H3BUK9 544 aa10.01□□□□□ -0.81
RPA3-203ENST00000401447 FAM212AQ96EL1 285 aa10.01□□□□□ -0.81
RPA3-203ENST00000401447 ATMINO43313 823 aaPredicted RBP9.99□□□□□ -0.81
RPA3-203ENST00000401447 NUBP1P53384 320 aa9.99□□□□□ -0.81
RPA3-203ENST00000401447 KIF12Q96FN5 646 aa9.99□□□□□ -0.81
RPA3-203ENST00000401447 RASEFQ8IZ41 740 aa9.98□□□□□ -0.81
RPA3-203ENST00000401447 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
RPA3-203ENST00000401447 GSE1Q14687 1217 aa9.95□□□□□ -0.82
RPA3-203ENST00000401447 DCAF8Q5TAQ9 597 aa9.94□□□□□ -0.82
RPA3-203ENST00000401447 CIZ1Q9ULV3 898 aaPredicted RBP9.94□□□□□ -0.82
RPA3-203ENST00000401447 MAP3K13O43283 966 aa9.91□□□□□ -0.82
RPA3-203ENST00000401447 C7P10643 843 aa9.91□□□□□ -0.82
RPA3-203ENST00000401447 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
RPA3-203ENST00000401447 METRNQ9UJH8 293 aa9.91□□□□□ -0.82
RPA3-203ENST00000401447 ATN1P54259 1190 aaPredicted RBP9.9□□□□□ -0.82
RPA3-203ENST00000401447 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.82
RPA3-203ENST00000401447 TRPC6Q9Y210 931 aa9.89□□□□□ -0.83
RPA3-203ENST00000401447 BMP2KQ9NSY1 1161 aaPredicted RBP9.88□□□□□ -0.83
RPA3-203ENST00000401447 POTEJP0CG39 1038 aa9.87□□□□□ -0.83
RPA3-203ENST00000401447 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
RPA3-203ENST00000401447 TIE1P35590 1138 aa9.85□□□□□ -0.83
RPA3-203ENST00000401447 SGIP1Q9BQI5 828 aa9.84□□□□□ -0.83
RPA3-203ENST00000401447 POTEFA5A3E0 1075 aa9.82□□□□□ -0.84
RPA3-203ENST00000401447 PYGBP11216 843 aa9.81□□□□□ -0.84
RPA3-203ENST00000401447 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
RPA3-203ENST00000401447 TTLL13PA6NNM8 815 aa9.8□□□□□ -0.84
RPA3-203ENST00000401447 ECM2O94769 699 aaPredicted RBP9.8□□□□□ -0.84
RPA3-203ENST00000401447 PKD2Q13563 968 aa9.79□□□□□ -0.84
RPA3-203ENST00000401447 PCDHB13Q9Y5F0 798 aa9.78□□□□□ -0.84
RPA3-203ENST00000401447 MAMSTRQ6ZN01 415 aa9.76□□□□□ -0.85
RPA3-203ENST00000401447 IFNL1Q8IU54 200 aa9.76□□□□□ -0.85
RPA3-203ENST00000401447 CHRM1P11229 460 aaPredicted RBP9.75□□□□□ -0.85
RPA3-203ENST00000401447 COLQQ9Y215 455 aaPredicted RBP9.73□□□□□ -0.85
RPA3-203ENST00000401447 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
RPA3-203ENST00000401447 TRIM35Q9UPQ4 493 aa9.72□□□□□ -0.85
RPA3-203ENST00000401447 IER5LQ5T953 404 aa9.71□□□□□ -0.86
RPA3-203ENST00000401447 SCUBE2Q9NQ36 999 aa9.69□□□□□ -0.86
RPA3-203ENST00000401447 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
RPA3-203ENST00000401447 TAOK2Q9UL54 1235 aa9.68□□□□□ -0.86
RPA3-203ENST00000401447 POTEMA6NI47 508 aa9.67□□□□□ -0.86
RPA3-203ENST00000401447 RGL2O15211 777 aa9.67□□□□□ -0.86
RPA3-203ENST00000401447 SEC24BO95487 1268 aa9.66□□□□□ -0.86
RPA3-203ENST00000401447 DCAF8L2P0C7V8 631 aa9.66□□□□□ -0.86
RPA3-203ENST00000401447 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
RPA3-203ENST00000401447 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
RPA3-203ENST00000401447 RNF25Q96BH1 459 aaPredicted RBP9.65□□□□□ -0.86
RPA3-203ENST00000401447 PCDHB8Q9UN66 801 aa9.65□□□□□ -0.86
RPA3-203ENST00000401447 POTEGQ6S5H5 508 aa9.64□□□□□ -0.87
RPA3-203ENST00000401447 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
RPA3-203ENST00000401447 IRX5P78411 483 aaPredicted RBP9.61□□□□□ -0.87
RPA3-203ENST00000401447 PDAP1Q13442 181 aaKnown RBP9.61□□□□□ -0.87
RPA3-203ENST00000401447 PSEN1P49768 467 aa9.58□□□□□ -0.88
RPA3-203ENST00000401447 FAM163AQ96GL9 167 aaPredicted RBP9.56□□□□□ -0.88
RPA3-203ENST00000401447 PLSCR2Q9NRY7 297 aa9.56□□□□□ -0.88
RPA3-203ENST00000401447 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.55□□□□□ -0.88
RPA3-203ENST00000401447 PLCG2P16885 1265 aa9.55□□□□□ -0.88
RPA3-203ENST00000401447 ZFP91Q96JP5 570 aaPredicted RBP9.55□□□□□ -0.88
RPA3-203ENST00000401447 STK25O00506 426 aa9.54□□□□□ -0.88
RPA3-203ENST00000401447 PCDH10Q9P2E7 1040 aa9.54□□□□□ -0.88
RPA3-203ENST00000401447 OCEL1Q9H607 264 aa9.53□□□□□ -0.88
RPA3-203ENST00000401447 GOLGA2Q08379 1002 aa9.52□□□□□ -0.89
RPA3-203ENST00000401447 CHGAP10645 457 aaKnown RBP9.51□□□□□ -0.89
RPA3-203ENST00000401447 BCL11BQ9C0K0 894 aaPredicted RBP9.51□□□□□ -0.89
RPA3-203ENST00000401447 STK24Q9Y6E0 443 aa9.51□□□□□ -0.89
RPA3-203ENST00000401447 HS6ST3Q8IZP7 471 aa9.49□□□□□ -0.89
RPA3-203ENST00000401447 SLAIN1Q8ND83 568 aa9.49□□□□□ -0.89
RPA3-203ENST00000401447 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
RPA3-203ENST00000401447 PDCD7Q8N8D1 485 aaKnown RBP9.46□□□□□ -0.9
RPA3-203ENST00000401447 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
RPA3-203ENST00000401447 ILDR1Q86SU0 546 aaPredicted RBP9.43□□□□□ -0.9
RPA3-203ENST00000401447 ST18O60284 1047 aa9.42□□□□□ -0.9
RPA3-203ENST00000401447 EFCAB3Q8N7B9 438 aa9.4□□□□□ -0.9
RPA3-203ENST00000401447 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.38□□□□□ -0.91
RPA3-203ENST00000401447 SOX12O15370 315 aa9.36□□□□□ -0.91
RPA3-203ENST00000401447 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
RPA3-203ENST00000401447 L3MBTL3Q96JM7 780 aaPredicted RBP9.36□□□□□ -0.91
RPA3-203ENST00000401447 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
RPA3-203ENST00000401447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
RPA3-203ENST00000401447 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.36□□□□□ -0.91
RPA3-203ENST00000401447 CDAN1Q8IWY9 1227 aa9.35□□□□□ -0.91
RPA3-203ENST00000401447 RYDENQ9NUL5 291 aaKnown RBP9.34□□□□□ -0.91
RPA3-203ENST00000401447 NLRP6P59044 892 aa9.33□□□□□ -0.92
RPA3-203ENST00000401447 SNPHO15079 494 aa9.32□□□□□ -0.92
RPA3-203ENST00000401447 TMEM121BQ9BXQ6 578 aaPredicted RBP9.32□□□□□ -0.92
RPA3-203ENST00000401447 PHF8Q9UPP1 1060 aa9.31□□□□□ -0.92
RPA3-203ENST00000401447 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
RPA3-203ENST00000401447 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
RPA3-203ENST00000401447 C3orf67Q6ZVT6 689 aa9.3□□□□□ -0.92
RPA3-203ENST00000401447 MFRPQ9BY79 579 aa9.3□□□□□ -0.92
RPA3-203ENST00000401447 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
RPA3-203ENST00000401447 G3V3G9 751 aa9.25□□□□□ -0.93
RPA3-203ENST00000401447 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms