RNA–Protein interactions for RNA: ENST00000400960.6

CR1-206, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

TSL 1 (best) BASIC

Gene CR1, Length 6,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-206ENST00000400960 TAOK2Q9UL54 1235 aa11.52□□□□□ -0.57
CR1-206ENST00000400960 MIER1Q8N108 512 aa11.51□□□□□ -0.57
CR1-206ENST00000400960 PTMAP06454 111 aaKnown RBP11.5□□□□□ -0.57
CR1-206ENST00000400960 DNTTIP2Q5QJE6 756 aaKnown RBP11.49□□□□□ -0.57
CR1-206ENST00000400960 DDRGK1Q96HY6 314 aa11.48□□□□□ -0.57
CR1-206ENST00000400960 NAP1L5Q96NT1 182 aaPredicted RBP11.48□□□□□ -0.57
CR1-206ENST00000400960 BECN1Q14457 450 aa11.47□□□□□ -0.57
CR1-206ENST00000400960 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
CR1-206ENST00000400960 C14orf37Q86TY3 774 aa11.47□□□□□ -0.57
CR1-206ENST00000400960 LAS1LQ9Y4W2 734 aaKnown RBP11.46□□□□□ -0.57
CR1-206ENST00000400960 CSRNP3Q8WYN3 585 aa11.45□□□□□ -0.58
CR1-206ENST00000400960 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
CR1-206ENST00000400960 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
CR1-206ENST00000400960 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
CR1-206ENST00000400960 ZRSR1Q15695 479 aaKnown RBP11.4□□□□□ -0.58
CR1-206ENST00000400960 ANP32EQ9BTT0 268 aa11.38□□□□□ -0.59
CR1-206ENST00000400960 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
CR1-206ENST00000400960 SUPT16HQ9Y5B9 1047 aaKnown RBP11.36□□□□□ -0.59
CR1-206ENST00000400960 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
CR1-206ENST00000400960 ARID4BQ4LE39 1312 aaPredicted RBP11.34□□□□□ -0.59
CR1-206ENST00000400960 FTSJ3Q8IY81 847 aaKnown RBP11.34□□□□□ -0.59
CR1-206ENST00000400960 RRP7BPQ9NSQ0 103 aa11.33□□□□□ -0.6
CR1-206ENST00000400960 NCBP3Q53F19 620 aaKnown RBP11.33□□□□□ -0.6
CR1-206ENST00000400960 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
CR1-206ENST00000400960 NEUROD2Q15784 382 aa11.32□□□□□ -0.6
CR1-206ENST00000400960 NPM1P06748 294 aaKnown RBP eCLIP11.32□□□□□ -0.6
CR1-206ENST00000400960 RGS3P49796 1198 aa11.32□□□□□ -0.6
CR1-206ENST00000400960 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
CR1-206ENST00000400960 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
CR1-206ENST00000400960 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
CR1-206ENST00000400960 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
CR1-206ENST00000400960 EIF4G2P78344 907 aaKnown RBP eCLIP11.3□□□□□ -0.6
CR1-206ENST00000400960 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
CR1-206ENST00000400960 NOP58Q9Y2X3 529 aaKnown RBP11.29□□□□□ -0.6
CR1-206ENST00000400960 ARID3AQ99856 593 aa11.29□□□□□ -0.6
CR1-206ENST00000400960 PPP1R15AO75807 674 aaPredicted RBP11.28□□□□□ -0.6
CR1-206ENST00000400960 FRAT1Q92837 279 aaPredicted RBP11.28□□□□□ -0.6
CR1-206ENST00000400960 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.61
CR1-206ENST00000400960 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
CR1-206ENST00000400960 GOLGA6L6A8MZA4 724 aa11.25□□□□□ -0.61
CR1-206ENST00000400960 CLSTN1O94985 981 aa11.25□□□□□ -0.61
CR1-206ENST00000400960 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
CR1-206ENST00000400960 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
CR1-206ENST00000400960 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
CR1-206ENST00000400960 MTUS2Q5JR59 1369 aa11.24□□□□□ -0.61
CR1-206ENST00000400960 OS9Q13438 667 aaPredicted RBP11.24□□□□□ -0.61
CR1-206ENST00000400960 DRC7Q8IY82 874 aa11.23□□□□□ -0.61
CR1-206ENST00000400960 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
CR1-206ENST00000400960 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
CR1-206ENST00000400960 NPHP1O15259 732 aa11.22□□□□□ -0.61
CR1-206ENST00000400960 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
CR1-206ENST00000400960 FGD1P98174 961 aa11.22□□□□□ -0.61
CR1-206ENST00000400960 KNSTRNQ9Y448 316 aa11.21□□□□□ -0.61
CR1-206ENST00000400960 DEKP35659 375 aaKnown RBP11.21□□□□□ -0.62
CR1-206ENST00000400960 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.62
CR1-206ENST00000400960 KCNJ4P48050 445 aa11.2□□□□□ -0.62
CR1-206ENST00000400960 MSNP26038 577 aaKnown RBP11.2□□□□□ -0.62
CR1-206ENST00000400960 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
CR1-206ENST00000400960 LMOD2Q6P5Q4 547 aa11.19□□□□□ -0.62
CR1-206ENST00000400960 PPP4R2Q9NY27 417 aa11.18□□□□□ -0.62
CR1-206ENST00000400960 CHAF1AQ13111 956 aaPredicted RBP11.17□□□□□ -0.62
CR1-206ENST00000400960 HSCBQ8IWL3 235 aa11.17□□□□□ -0.62
CR1-206ENST00000400960 CARD11Q9BXL7 1154 aa11.16□□□□□ -0.62
CR1-206ENST00000400960 U2SURPO15042 1029 aaKnown RBP11.15□□□□□ -0.62
CR1-206ENST00000400960 GOLGA6L4A6NEF3 574 aa11.15□□□□□ -0.62
CR1-206ENST00000400960 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
CR1-206ENST00000400960 GZF1Q9H116 711 aaPredicted RBP11.13□□□□□ -0.63
CR1-206ENST00000400960 ISY1Q9ULR0 285 aaKnown RBP11.13□□□□□ -0.63
CR1-206ENST00000400960 SOX12O15370 315 aa11.12□□□□□ -0.63
CR1-206ENST00000400960 CHMP7Q8WUX9 453 aaPredicted RBP11.12□□□□□ -0.63
CR1-206ENST00000400960 APBB1O00213 710 aa11.12□□□□□ -0.63
CR1-206ENST00000400960 ZCCHC6Q5VYS8 1495 aaKnown RBP11.11□□□□□ -0.63
CR1-206ENST00000400960 MYO15BQ96JP2 1530 aa11.11□□□□□ -0.63
CR1-206ENST00000400960 CLIP1P30622 1438 aa11.11□□□□□ -0.63
CR1-206ENST00000400960 SIN3AQ96ST3 1273 aa11.11□□□□□ -0.63
CR1-206ENST00000400960 L1TD1Q5T7N2 865 aaKnown RBP11.11□□□□□ -0.63
CR1-206ENST00000400960 NRDCO43847 1150 aa11.1□□□□□ -0.63
CR1-206ENST00000400960 PDE4CQ08493 712 aa11.1□□□□□ -0.63
CR1-206ENST00000400960 POGKQ9P215 609 aa11.1□□□□□ -0.63
CR1-206ENST00000400960 GNL2Q13823 731 aaKnown RBP11.09□□□□□ -0.63
CR1-206ENST00000400960 NUDCQ9Y266 331 aa11.08□□□□□ -0.63
CR1-206ENST00000400960 CCDC180Q9P1Z9 1646 aa11.08□□□□□ -0.64
CR1-206ENST00000400960 NOC3LQ8WTT2 800 aaKnown RBP11.07□□□□□ -0.64
CR1-206ENST00000400960 CDCA8Q53HL2 280 aa11.07□□□□□ -0.64
CR1-206ENST00000400960 MCCP23508 829 aa11.07□□□□□ -0.64
CR1-206ENST00000400960 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
CR1-206ENST00000400960 PNNQ9H307 717 aaKnown RBP11.04□□□□□ -0.64
CR1-206ENST00000400960 RBM19Q9Y4C8 960 aaKnown RBP11.04□□□□□ -0.64
CR1-206ENST00000400960 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
CR1-206ENST00000400960 HSP90B1P14625 803 aaKnown RBP11.03□□□□□ -0.64
CR1-206ENST00000400960 KIAA2012Q0VF49 1180 aa11.03□□□□□ -0.64
CR1-206ENST00000400960 SAFB2Q14151 953 aaKnown RBP eCLIP11.03□□□□□ -0.64
CR1-206ENST00000400960 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
CR1-206ENST00000400960 PRM3Q9NNZ6 103 aa11.02□□□□□ -0.64
CR1-206ENST00000400960 CEP162Q5TB80 1403 aa11.02□□□□□ -0.65
CR1-206ENST00000400960 RSF1Q96T23 1441 aaPredicted RBP11.02□□□□□ -0.65
CR1-206ENST00000400960 CHMP4BQ9H444 224 aaKnown RBP11.01□□□□□ -0.65
CR1-206ENST00000400960 PLEKHD1A6NEE1 506 aa11□□□□□ -0.65
CR1-206ENST00000400960 MS4A1P11836 297 aa11□□□□□ -0.65
CR1-206ENST00000400960 TNNT3P45378 269 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms