RNA–Protein interactions for RNA: ENST00000399586.2

TTC3P1-201, Transcript of tetratricopeptide repeat domain 3 pseudogene 1, humanhuman

BASIC

Gene TTC3P1, Length 6,081 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P1-201ENST00000399586 DDX10Q13206 875 aaKnown RBP10.83□□□□□ -0.68
TTC3P1-201ENST00000399586 TRIM44Q96DX7 344 aaPredicted RBP10.83□□□□□ -0.68
TTC3P1-201ENST00000399586 CHIC2Q9UKJ5 165 aa10.83□□□□□ -0.68
TTC3P1-201ENST00000399586 DNTTIP2Q5QJE6 756 aaKnown RBP10.82□□□□□ -0.68
TTC3P1-201ENST00000399586 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
TTC3P1-201ENST00000399586 TONSLQ96HA7 1378 aa10.81□□□□□ -0.68
TTC3P1-201ENST00000399586 LMOD2Q6P5Q4 547 aa10.8□□□□□ -0.68
TTC3P1-201ENST00000399586 PPM1GO15355 546 aaPredicted RBP10.79□□□□□ -0.68
TTC3P1-201ENST00000399586 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
TTC3P1-201ENST00000399586 AMER1Q5JTC6 1135 aaPredicted RBP10.79□□□□□ -0.68
TTC3P1-201ENST00000399586 ACIN1Q9UKV3 1341 aaKnown RBP10.78□□□□□ -0.68
TTC3P1-201ENST00000399586 NAP1L2Q9ULW6 460 aaPredicted RBP10.77□□□□□ -0.69
TTC3P1-201ENST00000399586 LAS1LQ9Y4W2 734 aaKnown RBP10.76□□□□□ -0.69
TTC3P1-201ENST00000399586 ARID4BQ4LE39 1312 aaPredicted RBP10.76□□□□□ -0.69
TTC3P1-201ENST00000399586 PRM3Q9NNZ6 103 aa10.75□□□□□ -0.69
TTC3P1-201ENST00000399586 ISY1Q9ULR0 285 aaKnown RBP10.75□□□□□ -0.69
TTC3P1-201ENST00000399586 TNNT2P45379 298 aaPredicted RBP10.75□□□□□ -0.69
TTC3P1-201ENST00000399586 GOLGA6L22H0YM25 854 aa10.74□□□□□ -0.69
TTC3P1-201ENST00000399586 HIRIP3Q9BW71 556 aaPredicted RBP10.73□□□□□ -0.69
TTC3P1-201ENST00000399586 MRS2Q9HD23 443 aa10.73□□□□□ -0.69
TTC3P1-201ENST00000399586 ABCC9O60706 1549 aa10.73□□□□□ -0.69
TTC3P1-201ENST00000399586 GOLGA2Q08379 1002 aa10.71□□□□□ -0.69
TTC3P1-201ENST00000399586 BECN1Q14457 450 aa10.71□□□□□ -0.69
TTC3P1-201ENST00000399586 CASC1Q6TDU7 716 aa10.71□□□□□ -0.7
TTC3P1-201ENST00000399586 FGD1P98174 961 aa10.69□□□□□ -0.7
TTC3P1-201ENST00000399586 OS9Q13438 667 aaPredicted RBP10.68□□□□□ -0.7
TTC3P1-201ENST00000399586 NEUROD2Q15784 382 aa10.68□□□□□ -0.7
TTC3P1-201ENST00000399586 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
TTC3P1-201ENST00000399586 NAP1L5Q96NT1 182 aaPredicted RBP10.66□□□□□ -0.7
TTC3P1-201ENST00000399586 PDE4CQ08493 712 aa10.66□□□□□ -0.7
TTC3P1-201ENST00000399586 FTSJ3Q8IY81 847 aaKnown RBP10.66□□□□□ -0.7
TTC3P1-201ENST00000399586 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
TTC3P1-201ENST00000399586 KCNJ4P48050 445 aa10.64□□□□□ -0.71
TTC3P1-201ENST00000399586 DDRGK1Q96HY6 314 aa10.64□□□□□ -0.71
TTC3P1-201ENST00000399586 RGL3Q3MIN7 710 aa10.64□□□□□ -0.71
TTC3P1-201ENST00000399586 GOLGA6L6A8MZA4 724 aa10.63□□□□□ -0.71
TTC3P1-201ENST00000399586 TSPY4P0CV99 314 aa10.63□□□□□ -0.71
TTC3P1-201ENST00000399586 TSPY10P0CW01 314 aa10.63□□□□□ -0.71
TTC3P1-201ENST00000399586 ANO8Q9HCE9 1232 aaPredicted RBP10.63□□□□□ -0.71
TTC3P1-201ENST00000399586 ERICH6BQ5W0A0 696 aa10.63□□□□□ -0.71
TTC3P1-201ENST00000399586 SOX12O15370 315 aa10.61□□□□□ -0.71
TTC3P1-201ENST00000399586 CFAP53Q96M91 514 aa10.59□□□□□ -0.71
TTC3P1-201ENST00000399586 FRAT1Q92837 279 aaPredicted RBP10.58□□□□□ -0.72
TTC3P1-201ENST00000399586 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
TTC3P1-201ENST00000399586 HSP90AB1P08238 724 aaKnown RBP10.58□□□□□ -0.72
TTC3P1-201ENST00000399586 ANP32EQ9BTT0 268 aa10.58□□□□□ -0.72
TTC3P1-201ENST00000399586 DRC7Q8IY82 874 aa10.57□□□□□ -0.72
TTC3P1-201ENST00000399586 RGS3P49796 1198 aa10.57□□□□□ -0.72
TTC3P1-201ENST00000399586 MAPK8IP3Q9UPT6 1336 aa10.56□□□□□ -0.72
TTC3P1-201ENST00000399586 GOLGA6L4A6NEF3 574 aa10.56□□□□□ -0.72
TTC3P1-201ENST00000399586 NOC3LQ8WTT2 800 aaKnown RBP10.56□□□□□ -0.72
TTC3P1-201ENST00000399586 CSRNP3Q8WYN3 585 aa10.56□□□□□ -0.72
TTC3P1-201ENST00000399586 SPRYD3Q8NCJ5 442 aa10.56□□□□□ -0.72
TTC3P1-201ENST00000399586 RRP7BPQ9NSQ0 103 aa10.56□□□□□ -0.72
TTC3P1-201ENST00000399586 PNNQ9H307 717 aaKnown RBP10.55□□□□□ -0.72
TTC3P1-201ENST00000399586 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
TTC3P1-201ENST00000399586 GNL2Q13823 731 aaKnown RBP10.55□□□□□ -0.72
TTC3P1-201ENST00000399586 ZNF330Q9Y3S2 320 aaPredicted RBP10.55□□□□□ -0.72
TTC3P1-201ENST00000399586 POGKQ9P215 609 aa10.54□□□□□ -0.72
TTC3P1-201ENST00000399586 CHMP7Q8WUX9 453 aaPredicted RBP10.53□□□□□ -0.72
TTC3P1-201ENST00000399586 NRDCO43847 1150 aa10.53□□□□□ -0.72
TTC3P1-201ENST00000399586 ARID3AQ99856 593 aa10.53□□□□□ -0.72
TTC3P1-201ENST00000399586 U2SURPO15042 1029 aaKnown RBP10.53□□□□□ -0.72
TTC3P1-201ENST00000399586 KNSTRNQ9Y448 316 aa10.53□□□□□ -0.72
TTC3P1-201ENST00000399586 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
TTC3P1-201ENST00000399586 KIAA2012Q0VF49 1180 aa10.51□□□□□ -0.73
TTC3P1-201ENST00000399586 KRI1Q8N9T8 703 aaKnown RBP10.51□□□□□ -0.73
TTC3P1-201ENST00000399586 APBB1O00213 710 aa10.49□□□□□ -0.73
TTC3P1-201ENST00000399586 CHAF1AQ13111 956 aaPredicted RBP10.49□□□□□ -0.73
TTC3P1-201ENST00000399586 EIF4G2P78344 907 aaKnown RBP eCLIP10.49□□□□□ -0.73
TTC3P1-201ENST00000399586 CC2D1BQ5T0F9 858 aaKnown RBP10.48□□□□□ -0.73
TTC3P1-201ENST00000399586 MLECQ14165 292 aa10.48□□□□□ -0.73
TTC3P1-201ENST00000399586 CCDC9Q9Y3X0 531 aaKnown RBP10.48□□□□□ -0.73
TTC3P1-201ENST00000399586 A0A0U1RQG5 324 aaPredicted RBP10.47□□□□□ -0.73
TTC3P1-201ENST00000399586 NUDCQ9Y266 331 aa10.47□□□□□ -0.73
TTC3P1-201ENST00000399586 WWC1Q8IX03 1113 aa10.47□□□□□ -0.73
TTC3P1-201ENST00000399586 CREBRFQ8IUR6 639 aa10.46□□□□□ -0.73
TTC3P1-201ENST00000399586 TMX4Q9H1E5 349 aaPredicted RBP10.46□□□□□ -0.73
TTC3P1-201ENST00000399586 MTUS2Q5JR59 1369 aa10.46□□□□□ -0.74
TTC3P1-201ENST00000399586 MIER1Q8N108 512 aa10.45□□□□□ -0.74
TTC3P1-201ENST00000399586 L1TD1Q5T7N2 865 aaKnown RBP10.44□□□□□ -0.74
TTC3P1-201ENST00000399586 G3V3G9 751 aa10.44□□□□□ -0.74
TTC3P1-201ENST00000399586 MSNP26038 577 aaKnown RBP10.44□□□□□ -0.74
TTC3P1-201ENST00000399586 DCAF8Q5TAQ9 597 aa10.44□□□□□ -0.74
TTC3P1-201ENST00000399586 SUPT16HQ9Y5B9 1047 aaKnown RBP10.44□□□□□ -0.74
TTC3P1-201ENST00000399586 SAFB2Q14151 953 aaKnown RBP eCLIP10.44□□□□□ -0.74
TTC3P1-201ENST00000399586 HSP90B1P14625 803 aaKnown RBP10.43□□□□□ -0.74
TTC3P1-201ENST00000399586 VPS53Q5VIR6 699 aa10.43□□□□□ -0.74
TTC3P1-201ENST00000399586 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
TTC3P1-201ENST00000399586 HSCBQ8IWL3 235 aa10.42□□□□□ -0.74
TTC3P1-201ENST00000399586 CARD11Q9BXL7 1154 aa10.42□□□□□ -0.74
TTC3P1-201ENST00000399586 CSB-PGBD3P0DP91 1061 aa10.41□□□□□ -0.74
TTC3P1-201ENST00000399586 MCCP23508 829 aa10.41□□□□□ -0.74
TTC3P1-201ENST00000399586 CHMP3Q9Y3E7 222 aa10.4□□□□□ -0.74
TTC3P1-201ENST00000399586 CDCA8Q53HL2 280 aa10.4□□□□□ -0.74
TTC3P1-201ENST00000399586 RTF1Q92541 710 aaKnown RBP10.39□□□□□ -0.75
TTC3P1-201ENST00000399586 RASSF8Q8NHQ8 419 aa10.38□□□□□ -0.75
TTC3P1-201ENST00000399586 PLEKHD1A6NEE1 506 aa10.38□□□□□ -0.75
TTC3P1-201ENST00000399586 SRPK2P78362 688 aaKnown RBP10.38□□□□□ -0.75
TTC3P1-201ENST00000399586 GORABQ5T7V8 394 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms