RNA–Protein interactions for RNA: ENST00000399177.7

CCDC178-203, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC178, Length 1,017 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-203ENST00000399177 DCBLD2Q96PD2 775 aa13.81□□□□□ -0.2
CCDC178-203ENST00000399177 FAM212AQ96EL1 285 aa13.77□□□□□ -0.21
CCDC178-203ENST00000399177 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
CCDC178-203ENST00000399177 RASEFQ8IZ41 740 aa13.71□□□□□ -0.21
CCDC178-203ENST00000399177 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
CCDC178-203ENST00000399177 POTEMA6NI47 508 aa13.66□□□□□ -0.22
CCDC178-203ENST00000399177 CCDC61Q9Y6R9 512 aa13.66□□□□□ -0.22
CCDC178-203ENST00000399177 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
CCDC178-203ENST00000399177 NUBP1P53384 320 aa13.65□□□□□ -0.22
CCDC178-203ENST00000399177 OTUD5Q96G74 571 aa13.65□□□□□ -0.22
CCDC178-203ENST00000399177 GSE1Q14687 1217 aa13.6□□□□□ -0.23
CCDC178-203ENST00000399177 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
CCDC178-203ENST00000399177 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
CCDC178-203ENST00000399177 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
CCDC178-203ENST00000399177 MS4A3Q96HJ5 214 aa13.58□□□□□ -0.24
CCDC178-203ENST00000399177 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
CCDC178-203ENST00000399177 MAP3K13O43283 966 aa13.54□□□□□ -0.24
CCDC178-203ENST00000399177 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
CCDC178-203ENST00000399177 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
CCDC178-203ENST00000399177 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
CCDC178-203ENST00000399177 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
CCDC178-203ENST00000399177 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
CCDC178-203ENST00000399177 PYGBP11216 843 aa13.47□□□□□ -0.25
CCDC178-203ENST00000399177 TIE1P35590 1138 aa13.41□□□□□ -0.26
CCDC178-203ENST00000399177 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
CCDC178-203ENST00000399177 ATMINO43313 823 aaPredicted RBP13.39□□□□□ -0.27
CCDC178-203ENST00000399177 SLC39A7Q92504 469 aa13.38□□□□□ -0.27
CCDC178-203ENST00000399177 ZNF467Q7Z7K2 595 aaPredicted RBP13.37□□□□□ -0.27
CCDC178-203ENST00000399177 IFNL1Q8IU54 200 aa13.37□□□□□ -0.27
CCDC178-203ENST00000399177 C7P10643 843 aa13.36□□□□□ -0.27
CCDC178-203ENST00000399177 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
CCDC178-203ENST00000399177 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
CCDC178-203ENST00000399177 METRNQ9UJH8 293 aa13.33□□□□□ -0.28
CCDC178-203ENST00000399177 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
CCDC178-203ENST00000399177 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
CCDC178-203ENST00000399177 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
CCDC178-203ENST00000399177 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
CCDC178-203ENST00000399177 SEC24BO95487 1268 aa13.3□□□□□ -0.28
CCDC178-203ENST00000399177 GOLGA2Q08379 1002 aa13.29□□□□□ -0.28
CCDC178-203ENST00000399177 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
CCDC178-203ENST00000399177 TRPC6Q9Y210 931 aa13.29□□□□□ -0.28
CCDC178-203ENST00000399177 MAMSTRQ6ZN01 415 aa13.27□□□□□ -0.29
CCDC178-203ENST00000399177 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
CCDC178-203ENST00000399177 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
CCDC178-203ENST00000399177 IER5LQ5T953 404 aa13.21□□□□□ -0.29
CCDC178-203ENST00000399177 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
CCDC178-203ENST00000399177 PSEN1P49768 467 aa13.17□□□□□ -0.3
CCDC178-203ENST00000399177 LCE2DQ5TA82 110 aaPredicted RBP13.17□□□□□ -0.3
CCDC178-203ENST00000399177 PLCG2P16885 1265 aa13.16□□□□□ -0.3
CCDC178-203ENST00000399177 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
CCDC178-203ENST00000399177 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
CCDC178-203ENST00000399177 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
CCDC178-203ENST00000399177 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
CCDC178-203ENST00000399177 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
CCDC178-203ENST00000399177 RIOK3O14730 519 aaKnown RBP13.07□□□□□ -0.32
CCDC178-203ENST00000399177 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
CCDC178-203ENST00000399177 OCEL1Q9H607 264 aa13.05□□□□□ -0.32
CCDC178-203ENST00000399177 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
CCDC178-203ENST00000399177 COLQQ9Y215 455 aaPredicted RBP13.03□□□□□ -0.32
CCDC178-203ENST00000399177 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
CCDC178-203ENST00000399177 G3V3G9 751 aa13□□□□□ -0.33
CCDC178-203ENST00000399177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.33
CCDC178-203ENST00000399177 IRX5P78411 483 aaPredicted RBP12.98□□□□□ -0.33
CCDC178-203ENST00000399177 POTEFA5A3E0 1075 aa12.95□□□□□ -0.34
CCDC178-203ENST00000399177 CDAN1Q8IWY9 1227 aa12.95□□□□□ -0.34
CCDC178-203ENST00000399177 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
CCDC178-203ENST00000399177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
CCDC178-203ENST00000399177 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
CCDC178-203ENST00000399177 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.34
CCDC178-203ENST00000399177 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
CCDC178-203ENST00000399177 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.89□□□□□ -0.35
CCDC178-203ENST00000399177 PKD2Q13563 968 aa12.87□□□□□ -0.35
CCDC178-203ENST00000399177 STK25O00506 426 aa12.86□□□□□ -0.35
CCDC178-203ENST00000399177 EFCAB3Q8N7B9 438 aa12.86□□□□□ -0.35
CCDC178-203ENST00000399177 STK24Q9Y6E0 443 aa12.86□□□□□ -0.35
CCDC178-203ENST00000399177 SLAIN1Q8ND83 568 aa12.85□□□□□ -0.35
CCDC178-203ENST00000399177 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
CCDC178-203ENST00000399177 SOX12O15370 315 aa12.83□□□□□ -0.36
CCDC178-203ENST00000399177 PDCD7Q8N8D1 485 aaKnown RBP12.82□□□□□ -0.36
CCDC178-203ENST00000399177 RGL2O15211 777 aa12.8□□□□□ -0.36
CCDC178-203ENST00000399177 BOLA1Q9Y3E2 137 aa12.77□□□□□ -0.37
CCDC178-203ENST00000399177 NLRP6P59044 892 aa12.75□□□□□ -0.37
CCDC178-203ENST00000399177 SNPHO15079 494 aa12.74□□□□□ -0.37
CCDC178-203ENST00000399177 MMRN1Q13201 1228 aa12.72□□□□□ -0.37
CCDC178-203ENST00000399177 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.37
CCDC178-203ENST00000399177 DPY19L2Q6NUT2 758 aa12.71□□□□□ -0.37
CCDC178-203ENST00000399177 ILDR1Q86SU0 546 aaPredicted RBP12.71□□□□□ -0.37
CCDC178-203ENST00000399177 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
CCDC178-203ENST00000399177 ST18O60284 1047 aa12.68□□□□□ -0.38
CCDC178-203ENST00000399177 SPNS2Q8IVW8 549 aa12.66□□□□□ -0.38
CCDC178-203ENST00000399177 CHGAP10645 457 aaKnown RBP12.65□□□□□ -0.38
CCDC178-203ENST00000399177 MICALL2Q8IY33 904 aa12.59□□□□□ -0.39
CCDC178-203ENST00000399177 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
CCDC178-203ENST00000399177 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
CCDC178-203ENST00000399177 MFRPQ9BY79 579 aa12.57□□□□□ -0.4
CCDC178-203ENST00000399177 RYDENQ9NUL5 291 aaKnown RBP12.57□□□□□ -0.4
CCDC178-203ENST00000399177 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
CCDC178-203ENST00000399177 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
CCDC178-203ENST00000399177 FBXO22Q8NEZ5 403 aa12.54□□□□□ -0.4
CCDC178-203ENST00000399177 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms